BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010766
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24130.3| unnamed protein product [Vitis vinifera]               62   5e-20
ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis v...    62   5e-20
ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communi...    59   3e-15
ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-14
ref|NP_001185436.1| nucleoprotein TPR [Arabidopsis thaliana] gi|...    57   6e-14

>emb|CBI24130.3| unnamed protein product [Vitis vinifera]
          Length = 2088

 Score = 61.6 bits (148), Expect(2) = 5e-20
 Identities = 26/48 (54%), Positives = 41/48 (85%)
 Frame = -1

Query: 346 MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSIT 203
           MPLFI++EE  RCSN+  L+++KAD++I  L+ +++T+KAQ+DA+SIT
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASIT 48



 Score = 60.8 bits (146), Expect(2) = 5e-20
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = -3

Query: 128 SEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 3
           +EQTC+LLEQKYISLS +FSKLESQN+QL  S+   L +LAQ
Sbjct: 49  AEQTCSLLEQKYISLSQEFSKLESQNAQLNSSLQERLSELAQ 90


>ref|XP_002265730.2| PREDICTED: nuclear-pore anchor-like [Vitis vinifera]
          Length = 2087

 Score = 61.6 bits (148), Expect(2) = 5e-20
 Identities = 26/48 (54%), Positives = 41/48 (85%)
 Frame = -1

Query: 346 MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSIT 203
           MPLFI++EE  RCSN+  L+++KAD++I  L+ +++T+KAQ+DA+SIT
Sbjct: 1   MPLFISDEEYSRCSNDVALVAEKADSFIRDLYNELQTVKAQADAASIT 48



 Score = 60.8 bits (146), Expect(2) = 5e-20
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = -3

Query: 128 SEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 3
           +EQTC+LLEQKYISLS +FSKLESQN+QL  S+   L +LAQ
Sbjct: 49  AEQTCSLLEQKYISLSQEFSKLESQNAQLNSSLQERLSELAQ 90


>ref|XP_002518821.1| Nucleoprotein TPR, putative [Ricinus communis]
           gi|223541994|gb|EEF43539.1| Nucleoprotein TPR, putative
           [Ricinus communis]
          Length = 2095

 Score = 58.9 bits (141), Expect(2) = 3e-15
 Identities = 27/42 (64%), Positives = 36/42 (85%)
 Frame = -3

Query: 128 SEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 3
           +EQTC+LLEQK++SLSS+FS LESQN+QL  S+D  L +LA+
Sbjct: 49  AEQTCSLLEQKFLSLSSEFSNLESQNAQLQTSLDDRLSELAE 90



 Score = 47.4 bits (111), Expect(2) = 3e-15
 Identities = 23/48 (47%), Positives = 34/48 (70%)
 Frame = -1

Query: 346 MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSIT 203
           MPLFI+++EL R S + + ++ KAD YI  L    ET+KA +DA++IT
Sbjct: 1   MPLFISDDELARHSGDVSFVAAKADDYIKGLQADFETVKAAADAAAIT 48


>ref|XP_002312219.1| predicted protein [Populus trichocarpa] gi|222852039|gb|EEE89586.1|
           predicted protein [Populus trichocarpa]
          Length = 2052

 Score = 59.3 bits (142), Expect(2) = 2e-14
 Identities = 27/42 (64%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 SEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 3
           +EQTC+LLEQK+++LS++FSKLESQN+QL  S+D  L +LAQ
Sbjct: 49  AEQTCSLLEQKFLALSTEFSKLESQNAQLQSSLDDRLSELAQ 90



 Score = 44.3 bits (103), Expect(2) = 2e-14
 Identities = 20/48 (41%), Positives = 35/48 (72%)
 Frame = -1

Query: 346 MPLFITEEELERCSNNPTLISQKADAYIIQLHRQIETLKAQSDASSIT 203
           M +FIT+++L R SN+ + ++ KAD +I  L  ++E ++A +DA+SIT
Sbjct: 1   MHIFITDDDLARHSNDASYVAAKADEFIRGLQSELENVRAAADAASIT 48


>ref|NP_001185436.1| nucleoprotein TPR [Arabidopsis thaliana]
           gi|332198107|gb|AEE36228.1| nucleoprotein TPR
           [Arabidopsis thaliana]
          Length = 2115

 Score = 57.0 bits (136), Expect(2) = 6e-14
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -3

Query: 128 SEQTCALLEQKYISLSSDFSKLESQNSQLTLSIDHHLQDLAQ 3
           +EQTC+LLEQKY+SLS DFS LESQN++L    D  L +LAQ
Sbjct: 50  AEQTCSLLEQKYLSLSQDFSSLESQNAKLQSDFDDRLAELAQ 91



 Score = 45.1 bits (105), Expect(2) = 6e-14
 Identities = 19/49 (38%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = -1

Query: 346 MPLFITEEELERCSNNP-TLISQKADAYIIQLHRQIETLKAQSDASSIT 203
           MPLF+ +EEL R S++  ++++++AD YI +++ ++++++A++DA+SIT
Sbjct: 1   MPLFMPDEELARLSSDAASVVAERADEYIRKIYAELDSVRAKADAASIT 49