BLASTX nr result

ID: Coptis25_contig00010765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010765
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001056985.1| Os06g0182500 [Oryza sativa Japonica Group] g...   135   5e-30
gb|EEE65212.1| hypothetical protein OsJ_20356 [Oryza sativa Japo...   135   5e-30
gb|EEC80136.1| hypothetical protein OsI_21924 [Oryza sativa Indi...   135   5e-30
gb|ACL54485.1| unknown [Zea mays]                                     134   1e-29
ref|NP_001130817.1| uncharacterized protein LOC100191921 [Zea ma...   134   1e-29

>ref|NP_001056985.1| Os06g0182500 [Oryza sativa Japonica Group]
           gi|55771369|dbj|BAD72536.1| LIM domain containing
           protein-like [Oryza sativa Japonica Group]
           gi|113595025|dbj|BAF18899.1| Os06g0182500 [Oryza sativa
           Japonica Group]
          Length = 486

 Score =  135 bits (339), Expect = 5e-30
 Identities = 68/106 (64%), Positives = 73/106 (68%)
 Frame = -2

Query: 511 GYRTLRPDVEEGICQVLAHMWLESEIMXXXXXXXXXXXXXXXXXXXXXXXTRSQFEKKLG 332
           GYRTL PDVEEGICQVLAHMW+ESEI+                        RSQFE+KLG
Sbjct: 381 GYRTLSPDVEEGICQVLAHMWIESEIIAGSGSNGASTSSSSSASTSSKKGGRSQFERKLG 440

Query: 331 DFFKHQIEFDASPTYGDGFRDCNRAVNKYGLKSTLEHIRLTGTFPY 194
           DFFKHQIE D S  YGDGFR  NRAV +YGLK TLEHIRLTGTFP+
Sbjct: 441 DFFKHQIESDTSMAYGDGFRAGNRAVLQYGLKRTLEHIRLTGTFPF 486


>gb|EEE65212.1| hypothetical protein OsJ_20356 [Oryza sativa Japonica Group]
          Length = 878

 Score =  135 bits (339), Expect = 5e-30
 Identities = 68/106 (64%), Positives = 73/106 (68%)
 Frame = -2

Query: 511  GYRTLRPDVEEGICQVLAHMWLESEIMXXXXXXXXXXXXXXXXXXXXXXXTRSQFEKKLG 332
            GYRTL PDVEEGICQVLAHMW+ESEI+                        RSQFE+KLG
Sbjct: 773  GYRTLSPDVEEGICQVLAHMWIESEIIAGSGSNGASTSSSSSASTSSKKGGRSQFERKLG 832

Query: 331  DFFKHQIEFDASPTYGDGFRDCNRAVNKYGLKSTLEHIRLTGTFPY 194
            DFFKHQIE D S  YGDGFR  NRAV +YGLK TLEHIRLTGTFP+
Sbjct: 833  DFFKHQIESDTSMAYGDGFRAGNRAVLQYGLKRTLEHIRLTGTFPF 878


>gb|EEC80136.1| hypothetical protein OsI_21924 [Oryza sativa Indica Group]
          Length = 878

 Score =  135 bits (339), Expect = 5e-30
 Identities = 68/106 (64%), Positives = 73/106 (68%)
 Frame = -2

Query: 511  GYRTLRPDVEEGICQVLAHMWLESEIMXXXXXXXXXXXXXXXXXXXXXXXTRSQFEKKLG 332
            GYRTL PDVEEGICQVLAHMW+ESEI+                        RSQFE+KLG
Sbjct: 773  GYRTLSPDVEEGICQVLAHMWIESEIIAGSGSNGASTSSSSSASTSSKKGGRSQFERKLG 832

Query: 331  DFFKHQIEFDASPTYGDGFRDCNRAVNKYGLKSTLEHIRLTGTFPY 194
            DFFKHQIE D S  YGDGFR  NRAV +YGLK TLEHIRLTGTFP+
Sbjct: 833  DFFKHQIESDTSMAYGDGFRAGNRAVLQYGLKRTLEHIRLTGTFPF 878


>gb|ACL54485.1| unknown [Zea mays]
          Length = 508

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/106 (64%), Positives = 71/106 (66%)
 Frame = -2

Query: 511 GYRTLRPDVEEGICQVLAHMWLESEIMXXXXXXXXXXXXXXXXXXXXXXXTRSQFEKKLG 332
           GYRTL PDVEEGICQVLAHMW+ESEIM                        RSQFE +LG
Sbjct: 403 GYRTLSPDVEEGICQVLAHMWIESEIMAGSGSSAASSSSGSSSSTSSKKGGRSQFEHRLG 462

Query: 331 DFFKHQIEFDASPTYGDGFRDCNRAVNKYGLKSTLEHIRLTGTFPY 194
           DFFKHQIE D S  YGDGFR  NRAV  YGLK TLEHIRLTGTFP+
Sbjct: 463 DFFKHQIETDTSMAYGDGFRTGNRAVLHYGLKRTLEHIRLTGTFPF 508


>ref|NP_001130817.1| uncharacterized protein LOC100191921 [Zea mays]
           gi|194690194|gb|ACF79181.1| unknown [Zea mays]
           gi|238008664|gb|ACR35367.1| unknown [Zea mays]
           gi|413942526|gb|AFW75175.1| hypothetical protein
           ZEAMMB73_868323 [Zea mays] gi|413942527|gb|AFW75176.1|
           hypothetical protein ZEAMMB73_868323 [Zea mays]
           gi|413942528|gb|AFW75177.1| hypothetical protein
           ZEAMMB73_868323 [Zea mays] gi|413942529|gb|AFW75178.1|
           hypothetical protein ZEAMMB73_868323 [Zea mays]
          Length = 508

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/106 (64%), Positives = 71/106 (66%)
 Frame = -2

Query: 511 GYRTLRPDVEEGICQVLAHMWLESEIMXXXXXXXXXXXXXXXXXXXXXXXTRSQFEKKLG 332
           GYRTL PDVEEGICQVLAHMW+ESEIM                        RSQFE +LG
Sbjct: 403 GYRTLSPDVEEGICQVLAHMWIESEIMAGSGSSAASSSSGSSSSTSSKKGGRSQFEHRLG 462

Query: 331 DFFKHQIEFDASPTYGDGFRDCNRAVNKYGLKSTLEHIRLTGTFPY 194
           DFFKHQIE D S  YGDGFR  NRAV  YGLK TLEHIRLTGTFP+
Sbjct: 463 DFFKHQIETDTSMAYGDGFRTGNRAVLHYGLKRTLEHIRLTGTFPF 508


Top