BLASTX nr result

ID: Coptis25_contig00010759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010759
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268334.1| PREDICTED: uncharacterized protein LOC100267...   369   e-100
emb|CBI36690.3| unnamed protein product [Vitis vinifera]              356   5e-96
ref|NP_001118858.1| uncharacterized protein [Arabidopsis thalian...   348   1e-93
ref|XP_002533364.1| hypothetical protein RCOM_0453040 [Ricinus c...   347   4e-93
ref|XP_002327979.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91

>ref|XP_002268334.1| PREDICTED: uncharacterized protein LOC100267873 [Vitis vinifera]
          Length = 304

 Score =  369 bits (947), Expect = e-100
 Identities = 189/305 (61%), Positives = 235/305 (77%), Gaps = 5/305 (1%)
 Frame = +2

Query: 65  MEVAELDEVLKVLNSCVSRIKWRLKSAARRRLEIDILALCTGLRPVVMVDYGGKLPELQE 244
           ME A+L+ VL+VL++ +SR KWRLK++++RRLEIDILALCTG+RPVVMVDYGGK+PELQE
Sbjct: 1   METAKLEGVLQVLSTSLSRTKWRLKASSKRRLEIDILALCTGMRPVVMVDYGGKMPELQE 60

Query: 245 RLCTVLQLSQKESSVLKSLRVMVIEDMIYLVNVGELVEHVTSSLKSEAELQFVDLEQDPP 424
           RLC VL+LSQK SS+   LR+MVIEDMIYL++V EL EHV SSL SE EL FVDLE +PP
Sbjct: 61  RLCAVLKLSQKASSIFYHLRIMVIEDMIYLIHVKELAEHVRSSLNSEPELHFVDLEHNPP 120

Query: 425 KMISCAQQNPIAMQLESLQRIFSAAFPADGTTKDFSPCPVEQHV-----STGEQISSQSS 589
           KMI  A+++ +AMQL S+Q+ FS  FP D    D  P    + +     S  E ++SQSS
Sbjct: 121 KMIVQAEKSSVAMQLISVQKWFSLLFPVDEINNDLLPSITTEVMSIAKPSISEPVASQSS 180

Query: 590 TFIDLGSCLQESSLTIPTLNGWLLGYPVVYLFGKDHIADAIYNLSTKDLHLYKILICRKG 769
             IDL S +Q + + +PTLNGWLLGYPVVYLF  +HI+DAI+NLSTK L ++KILICR  
Sbjct: 181 EIIDLSSGIQGTQVAVPTLNGWLLGYPVVYLFSTEHISDAIFNLSTKSLRIFKILICRND 240

Query: 770 ISSKGTQQEELMSFSVPYCLSMGGKNEPWAEAFLARILTKLERCKQAWRDLQMEVTECNP 949
            + KG+ +EEL+SFSVPY LSMGG NEPWA+AF+A +  K E+CKQ W  LQMEV+E  P
Sbjct: 241 -AYKGSGKEELLSFSVPYDLSMGGSNEPWAKAFMAHLEAKWEKCKQVWSSLQMEVSEYPP 299

Query: 950 QAIAL 964
           QAIAL
Sbjct: 300 QAIAL 304


>emb|CBI36690.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  356 bits (914), Expect = 5e-96
 Identities = 181/297 (60%), Positives = 228/297 (76%), Gaps = 5/297 (1%)
 Frame = +2

Query: 65  MEVAELDEVLKVLNSCVSRIKWRLKSAARRRLEIDILALCTGLRPVVMVDYGGKLPELQE 244
           ME A+L+ VL+VL++ +SR KWRLK++++RRLEIDILALCTG+RPVVMVDYGGK+PELQE
Sbjct: 1   METAKLEGVLQVLSTSLSRTKWRLKASSKRRLEIDILALCTGMRPVVMVDYGGKMPELQE 60

Query: 245 RLCTVLQLSQKESSVLKSLRVMVIEDMIYLVNVGELVEHVTSSLKSEAELQFVDLEQDPP 424
           RLC VL+LSQK SS+   LR+MVIEDMIYL++V EL EHV SSL SE EL FVDLE +PP
Sbjct: 61  RLCAVLKLSQKASSIFYHLRIMVIEDMIYLIHVKELAEHVRSSLNSEPELHFVDLEHNPP 120

Query: 425 KMISCAQQNPIAMQLESLQRIFSAAFPADGTTKDFSPCPVEQHV-----STGEQISSQSS 589
           KMI  A+++ +AMQL S+Q+ FS  FP D    D  P    + +     S  E ++SQSS
Sbjct: 121 KMIVQAEKSSVAMQLISVQKWFSLLFPVDEINNDLLPSITTEVMSIAKPSISEPVASQSS 180

Query: 590 TFIDLGSCLQESSLTIPTLNGWLLGYPVVYLFGKDHIADAIYNLSTKDLHLYKILICRKG 769
             IDL S +Q + + +PTLNGWLLGYPVVYLF  +HI+DAI+NLSTK L ++KILICR  
Sbjct: 181 EIIDLSSGIQGTQVAVPTLNGWLLGYPVVYLFSTEHISDAIFNLSTKSLRIFKILICRND 240

Query: 770 ISSKGTQQEELMSFSVPYCLSMGGKNEPWAEAFLARILTKLERCKQAWRDLQMEVTE 940
            + KG+ +EEL+SFSVPY LSMGG NEPWA+AF+A +  K E+CKQ W  LQME ++
Sbjct: 241 -AYKGSGKEELLSFSVPYDLSMGGSNEPWAKAFMAHLEAKWEKCKQVWSSLQMEESD 296


>ref|NP_001118858.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332646411|gb|AEE79932.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 293

 Score =  348 bits (894), Expect = 1e-93
 Identities = 173/300 (57%), Positives = 224/300 (74%)
 Frame = +2

Query: 65  MEVAELDEVLKVLNSCVSRIKWRLKSAARRRLEIDILALCTGLRPVVMVDYGGKLPELQE 244
           MEV   +E+L+ L+SC+S+IKWRLKS ++RRLEID+LALCTG+RPVVM+DYGGK+PELQ 
Sbjct: 1   MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60

Query: 245 RLCTVLQLSQKESSVLKSLRVMVIEDMIYLVNVGELVEHVTSSLKSEAELQFVDLEQDPP 424
           RL ++L+L ++   V K L+VMVIEDMIYL+NV  L + V+SSL SE EL F+DLEQDPP
Sbjct: 61  RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120

Query: 425 KMISCAQQNPIAMQLESLQRIFSAAFPADGTTKDFSPCPVEQHVSTGEQISSQSSTFIDL 604
           KM++ ++++ + MQL S+Q++FS+ FP D +  D +           E  SSQ+S  IDL
Sbjct: 121 KMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTT-------TVLDEANSSQTSLCIDL 173

Query: 605 GSCLQESSLTIPTLNGWLLGYPVVYLFGKDHIADAIYNLSTKDLHLYKILICRKGISSKG 784
             CLQ++ +TIPTLNGWLL YPVVYLFG DHI +AIYNLSTK L L+K+L+CR G + K 
Sbjct: 174 SCCLQDTKVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKD 233

Query: 785 TQQEELMSFSVPYCLSMGGKNEPWAEAFLARILTKLERCKQAWRDLQMEVTECNPQAIAL 964
           +  EEL SFSVPY LSM G  E WAE FL R+ ++ E CK  WR L ++V+EC PQAI L
Sbjct: 234 SHLEELTSFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL 293


>ref|XP_002533364.1| hypothetical protein RCOM_0453040 [Ricinus communis]
           gi|223526804|gb|EEF29026.1| hypothetical protein
           RCOM_0453040 [Ricinus communis]
          Length = 323

 Score =  347 bits (889), Expect = 4e-93
 Identities = 177/326 (54%), Positives = 235/326 (72%), Gaps = 26/326 (7%)
 Frame = +2

Query: 65  MEVAELDEVLKVLNSCVSRIKWRLKSAARRRLEIDILALCTGLRPVVMVDYGGKLPELQE 244
           MEVAE++++L++L+S +S IKWRLKS A+ RL+ID+LALCT +RPV+MVDYGGK+PELQE
Sbjct: 1   MEVAEVEQLLRILDSSLSHIKWRLKSHAKHRLQIDVLALCTEMRPVIMVDYGGKMPELQE 60

Query: 245 RLCTVLQLSQKESSVLKSLRVMVIEDMIYLVNVGELVEHVTSSLKSEAELQFVDLEQDPP 424
            LC +L+L Q+ES + + L+VM+IEDMIYL++V  LVE+V SSL SE +L FV+LEQDPP
Sbjct: 61  HLCALLRLCQQESPIFEHLKVMIIEDMIYLIHVKGLVEYVKSSLNSEVDLVFVNLEQDPP 120

Query: 425 KMISCAQQNPIAMQLESLQRIFSAAFPADGTTKDFSPCPVEQHV---------------- 556
           KM++ A+ + +   L  +Q++FS   P +   ++ SPC + +                  
Sbjct: 121 KMVTQAENSSLNAALVRVQKLFSLYLPVN---ENVSPCHLTETAANASDNVANAADSVAN 177

Query: 557 ----------STGEQISSQSSTFIDLGSCLQESSLTIPTLNGWLLGYPVVYLFGKDHIAD 706
                     S  + I SQSS FID  SC+Q+S +T+PTLNGWLLGYPVVYLF K+HIAD
Sbjct: 178 AADSVASAESSINKPIISQSSEFIDFSSCMQDSEVTVPTLNGWLLGYPVVYLFSKEHIAD 237

Query: 707 AIYNLSTKDLHLYKILICRKGISSKGTQQEELMSFSVPYCLSMGGKNEPWAEAFLARILT 886
           AIYNLSTK L +++IL+ R    +K ++ EELMSFSVPY LSMGG  EPWAEAFLA++ +
Sbjct: 238 AIYNLSTKYLRIFQILVSRNISPNKASRPEELMSFSVPYELSMGGSKEPWAEAFLAQMQS 297

Query: 887 KLERCKQAWRDLQMEVTECNPQAIAL 964
           + E+ KQ WR LQMEV+EC PQAI L
Sbjct: 298 RWEKSKQIWRTLQMEVSECYPQAIVL 323


>ref|XP_002327979.1| predicted protein [Populus trichocarpa] gi|222837388|gb|EEE75767.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  342 bits (876), Expect = 1e-91
 Identities = 167/300 (55%), Positives = 225/300 (75%), Gaps = 5/300 (1%)
 Frame = +2

Query: 80  LDEVLKVLNSCVSRIKWRLKSAARRRLEIDILALCTGLRPVVMVDYGGKLPELQERLCTV 259
           ++E +K+L+S +S IKWRLK  A+ RL+IDI+AL T +RPV+MVDYGGKLPELQ+ LC +
Sbjct: 1   MEEAIKLLDSALSHIKWRLKFPAKNRLQIDIVALLTEMRPVIMVDYGGKLPELQDHLCAL 60

Query: 260 LQLSQKESSVLKSLRVMVIEDMIYLVNVGELVEHVTSSLKSEAELQFVDLEQDPPKMISC 439
           ++  Q+ES++ ++LRVMVIEDMIYL++V  + E+V SSL  E EL FV+LE+DPPKM++ 
Sbjct: 61  VKFCQQESAIFENLRVMVIEDMIYLIHVRGIAEYVKSSLNLEVELFFVNLEEDPPKMVTQ 120

Query: 440 AQQNPIAMQLESLQRIFSAAFPADGTTKDFSPCPVEQHVSTGEQ-----ISSQSSTFIDL 604
           A+++ +  +L  +Q++FS+ FP +G + D     +   V+  E       +SQSS FIDL
Sbjct: 121 AEESTLVTELIRVQKLFSSFFPLNGNSNDLLSHQMLDSVANAESSVNKPATSQSSEFIDL 180

Query: 605 GSCLQESSLTIPTLNGWLLGYPVVYLFGKDHIADAIYNLSTKDLHLYKILICRKGISSKG 784
             C+Q++ +T+PTLNGWLLGYPVVYLF K HI DAIYNLSTK L +++IL+ R     KG
Sbjct: 181 SCCMQDTEITVPTLNGWLLGYPVVYLFSKQHIEDAIYNLSTKYLRIFQILVSRYASPKKG 240

Query: 785 TQQEELMSFSVPYCLSMGGKNEPWAEAFLARILTKLERCKQAWRDLQMEVTECNPQAIAL 964
           +Q EEL+SFSVPY LSMGG NEPWA AFLA++ TK  +CK  WR L+MEV+EC PQAI L
Sbjct: 241 SQPEELLSFSVPYELSMGGSNEPWAVAFLAQMQTKWAKCKPTWRSLKMEVSECYPQAIVL 300


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