BLASTX nr result
ID: Coptis25_contig00010752
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010752
(2114 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518375.1| ring finger protein, putative [Ricinus commu... 237 1e-59
ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264... 231 4e-58
emb|CAN79595.1| hypothetical protein VITISV_007038 [Vitis vinifera] 231 4e-58
ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|2... 194 1e-46
emb|CBI20233.3| unnamed protein product [Vitis vinifera] 179 2e-42
>ref|XP_002518375.1| ring finger protein, putative [Ricinus communis]
gi|223542470|gb|EEF44011.1| ring finger protein, putative
[Ricinus communis]
Length = 549
Score = 237 bits (604), Expect = 1e-59
Identities = 152/430 (35%), Positives = 222/430 (51%), Gaps = 16/430 (3%)
Frame = +1
Query: 58 MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
MG+RNM+CTSQ++D+++D+Q QG++HP+ C +G ++ P + +++ASGS +NID H
Sbjct: 1 MGQRNMLCTSQMIDLEVDRQGQGYLHPEPCILLGGVSNFPQSDIQTMVTASGSTTNIDAH 60
Query: 238 HFANSHDSSMFYG-SHFNGLQH--RNPVTNMDLGV--SSNFHSPCMIPPPVNRVFPISHV 402
+DS++FYG ++G+QH ++ N+DLGV +SNF+ P M P + P+SH
Sbjct: 61 RLPEHYDSAIFYGMPQYHGVQHHPQHHAPNLDLGVATASNFYVPYMTP---SSGIPLSHG 117
Query: 403 SCDQLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXXX 582
SCD LP S+ +G+ V ++G N+ FMD R S KRKNAEG PG++ +VN
Sbjct: 118 SCDHLPSSTSYGVIGVSGDEYGMNNHFMDNARGSYKRKNAEGNPGNFQYVNASAGSSSSV 177
Query: 583 LCIPPPSVGILQSEGQLESGAAVLEATASVPPEYGVNGVSLI--XXXXXXXXXXXXXLQV 756
L P G ++++A++ P+Y NG+ I +
Sbjct: 178 LSTRHP------------DGISLMDASSFASPQYRGNGILSIREVGSHRSVRNRSGATGL 225
Query: 757 ESPMLLNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNVN 927
ES + + NH QGNYI Q FQPA W +Q WN P ++Y++G NVN
Sbjct: 226 ESVLAHSQNHFIQGNYIGQPFQPAGSLWADQH--SSSSDAGTLAWNQNPAINYMHGNNVN 283
Query: 928 GVSSEIASMGGQGYTDAMNSRNSTVL--XXXXXXXXXXXXXXXXXXQAMHVHN-NFHIQA 1098
G S E S+ Q Y + ++R++T Q M HN N Q
Sbjct: 284 GGSVETGSIVPQRYHELSSNRSNTTFLHPSPPNIRHHNFHHPLPPIQGMRGHNLNVPPQV 343
Query: 1099 TVPSFRHTTSNTLHHGTINHSPDDLEIGSRHPRPLPPN--RIYRPHRSGVHHAVPV-NSN 1269
+ SFR TS +N S D L+IG RHP + P RIYRPHR GV + + N
Sbjct: 344 SAASFRGLTSYA-SQSNVNPSQDGLDIGVRHPGSVQPTGLRIYRPHRDGVIPETTLRHRN 402
Query: 1270 RPHLRYMSED 1299
PHLR + D
Sbjct: 403 LPHLRVLPTD 412
Score = 176 bits (446), Expect = 2e-41
Identities = 83/129 (64%), Positives = 101/129 (78%), Gaps = 5/129 (3%)
Frame = +2
Query: 1448 VAILEIPGFYEVGNLIDRHRDMRLDIDDMSYEELLALGEQIGSVITGLPEETILRHLKTR 1627
+A+LE P +YEV N +D H DMRLDI+DMSYEELLALGE+IGSV TGL EETI LKTR
Sbjct: 414 IAVLEFPDYYEVENYVDHHSDMRLDIEDMSYEELLALGERIGSVNTGLSEETIRSQLKTR 473
Query: 1628 VYISSASKDMNNEV-----ETGTCIVCQVEYRNQEKVGTLGCGHEYHADCIKKWLQVKNV 1792
Y+SS E+ E G+CI+CQ EY+++EK+GTL CGHEYHADC+KKWL+VKNV
Sbjct: 474 KYLSSPMSINLEEITCMDQELGSCIICQDEYKSKEKIGTLDCGHEYHADCLKKWLRVKNV 533
Query: 1793 CPICKVQAI 1819
CPICK +A+
Sbjct: 534 CPICKSEAL 542
>ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264059 [Vitis vinifera]
Length = 543
Score = 231 bits (590), Expect = 4e-58
Identities = 151/427 (35%), Positives = 228/427 (53%), Gaps = 16/427 (3%)
Frame = +1
Query: 58 MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
MG+RNM+CT Q++D+ +D++ QGH H V N P P+M+ +LSA G++SN D+
Sbjct: 1 MGQRNMMCTGQMIDLQMDERNQGH----HVISVTN---FPQPNMHSMLSAPGNSSNFDVR 53
Query: 238 HFANSHD-SSMFYG-SHFNGLQHRNPVTNMDLGVS--SNFHSPCMIPPPVNRVFPIS--H 399
H +D S+MFYG +NG+QH +PV ++D+GV+ SN ++P + P NR FP+S H
Sbjct: 54 HLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGVAPGSNIYNPYLTPSSGNRGFPVSINH 113
Query: 400 VSCDQLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXX 579
DQLP SS+HG+ V ++G + FMDGVR + KRKNAEG+ G++ ++N
Sbjct: 114 GPSDQLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYINGLASSSS- 172
Query: 580 XLCIPPPSVGILQSEGQLESGAAVLEATASVPPEY-GVNGVSLI-XXXXXXXXXXXXXLQ 753
+PP + LESG +++++ + P+Y G N S++ +
Sbjct: 173 --SVPP------FNTRHLESGVSMMDSASFAQPQYRGNNAPSIMEVGSHRSVRNRSGAVG 224
Query: 754 VESPMLLNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNV 924
++S + N NHL QGNYI FQP+ WV+QQ G WN+ P + YL+G N+
Sbjct: 225 LDSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPYLHGSNI 284
Query: 925 NGVSSEIASMGGQGYTDAMNSRNST--VLXXXXXXXXXXXXXXXXXXQAMHVHNNFHIQA 1098
+G S E ++G QGY D + R+ST + ++FH Q
Sbjct: 285 SGGSREAGNVGIQGYHDTSSGRSSTNYLQPPVLHRPHTLHYPPPPPPPMQGARSHFHPQV 344
Query: 1099 TVPSFRHTTSNTLHHGTINHSPDDLEIGSRHPRPLPPN--RIYRPHRSGV-HHAVPVNSN 1269
S+R T ++ G + +E G RHP P+PP RIYR +R GV A + N
Sbjct: 345 VASSYRLPTISS--RGPVPPQV-GVEAGPRHPGPVPPTGIRIYRSNRGGVAPEATSRHHN 401
Query: 1270 RPHLRYM 1290
P+LR +
Sbjct: 402 LPYLRML 408
Score = 179 bits (454), Expect = 3e-42
Identities = 86/131 (65%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Frame = +2
Query: 1442 KEVAILEIPGFYEVGNLIDRHRDMRLDIDDMSYEELLALGEQIGSVITGLPEETILRHLK 1621
+EVAIL++ FYEVG+LID HRDMRLDI+DMSYEELLALGE+IG V TGL EE+I LK
Sbjct: 411 EEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGERIGHVSTGLSEESITNCLK 470
Query: 1622 TRVYISSASKDMNN----EVETGTCIVCQVEYRNQEKVGTLGCGHEYHADCIKKWLQVKN 1789
TR YISS ++ ++E +CI+CQ EYRNQEK+G L CGHEYHA C+KKWL VKN
Sbjct: 471 TRTYISSTCLNLEEAASMDLENDSCIICQEEYRNQEKIGFLDCGHEYHAGCLKKWLLVKN 530
Query: 1790 VCPICKVQAIS 1822
VCPICK A++
Sbjct: 531 VCPICKAPAMT 541
>emb|CAN79595.1| hypothetical protein VITISV_007038 [Vitis vinifera]
Length = 656
Score = 231 bits (590), Expect = 4e-58
Identities = 151/427 (35%), Positives = 228/427 (53%), Gaps = 16/427 (3%)
Frame = +1
Query: 58 MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
MG+RNM+CT Q++D+ +D++ QGH H V N P P+M+ +LSA G++SN D+
Sbjct: 1 MGQRNMMCTGQMIDLQMDERNQGH----HVISVTN---FPQPNMHSMLSAPGNSSNFDVR 53
Query: 238 HFANSHD-SSMFYG-SHFNGLQHRNPVTNMDLGVS--SNFHSPCMIPPPVNRVFPIS--H 399
H +D S+MFYG +NG+QH +PV ++D+GV+ SN ++P + P NR FP+S H
Sbjct: 54 HLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGVAPGSNIYNPYLTPSSGNRGFPVSINH 113
Query: 400 VSCDQLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXX 579
DQLP SS+HG+ V ++G + FMDGVR + KRKNAEG+ G++ ++N
Sbjct: 114 GPSDQLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYINGLASSSS- 172
Query: 580 XLCIPPPSVGILQSEGQLESGAAVLEATASVPPEY-GVNGVSLI-XXXXXXXXXXXXXLQ 753
+PP + LESG +++++ + P+Y G N S++ +
Sbjct: 173 --SVPP------FNTRHLESGVSMMDSASFAQPQYRGNNAPSIMEVGSHRSVRNRSGAVG 224
Query: 754 VESPMLLNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNV 924
++S + N NHL QGNYI FQP+ WV+QQ G WN+ P + YL+G N+
Sbjct: 225 LDSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPYLHGSNI 284
Query: 925 NGVSSEIASMGGQGYTDAMNSRNST--VLXXXXXXXXXXXXXXXXXXQAMHVHNNFHIQA 1098
+G S E ++G QGY D + R+ST + ++FH Q
Sbjct: 285 SGGSREAGNVGIQGYHDTSSGRSSTNYLQPPVLHRPHTLHYPPPPPPPMQGARSHFHPQV 344
Query: 1099 TVPSFRHTTSNTLHHGTINHSPDDLEIGSRHPRPLPPN--RIYRPHRSGV-HHAVPVNSN 1269
S+R T ++ G + +E G RHP P+PP RIYR +R GV A + N
Sbjct: 345 VASSYRLPTISS--RGPVPPQV-GVEAGPRHPGPVPPTGIRIYRSNRGGVAPEATSRHHN 401
Query: 1270 RPHLRYM 1290
P+LR +
Sbjct: 402 LPYLRML 408
Score = 109 bits (273), Expect = 3e-21
Identities = 55/92 (59%), Positives = 70/92 (76%), Gaps = 4/92 (4%)
Frame = +2
Query: 1442 KEVAILEIPGFYEVGNLIDRHRDMRLDIDDMSYEELLALGEQIGSVITGLPEETILRHLK 1621
+EVAIL++ FYEVG+LID HRDMRLDI+DMSYEELLALGE+IG V TGL EE+I LK
Sbjct: 411 EEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGERIGHVSTGLSEESITNCLK 470
Query: 1622 TRVYISSASKDMNN----EVETGTCIVCQVEY 1705
TR YISS ++ ++E +CI+CQ ++
Sbjct: 471 TRTYISSTCLNLEEAASMDLENDSCIICQKQF 502
Score = 76.3 bits (186), Expect = 3e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 1700 EYRNQEKVGTLGCGHEYHADCIKKWLQVKNVCPICKVQAIS 1822
EYRNQEK+G L CGHEYHA C+KKWL VKNVCPICK A++
Sbjct: 614 EYRNQEKIGFLDCGHEYHAGCLKKWLLVKNVCPICKAPAMT 654
>ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|222846156|gb|EEE83703.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 194 bits (492), Expect = 1e-46
Identities = 133/414 (32%), Positives = 202/414 (48%), Gaps = 16/414 (3%)
Frame = +1
Query: 106 IDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMHHFANSHDSSMFYGS-H 282
+DQQ+QG++HP+ C +G + P + +L+ASG+ N D H A+ +D +MFYG
Sbjct: 1 MDQQSQGYLHPESCILLGGVTNFRPPDIPTMLTASGNTINRDAH-LADRYDGAMFYGMPQ 59
Query: 283 FNGL----QHRNPVTNMDLGVSSNFHSPCMIPPPVNRVFPISHVSCDQLPYSSHHGIAAV 450
++G+ Q+ +P ++ + + NF+ P M P + PISH SCDQL S+++G+ V
Sbjct: 60 YHGVHPHPQYHSPNLDLSVATAPNFYVPYMTP---SSGIPISHASCDQLSSSNNYGVIGV 116
Query: 451 GISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXXXLCIPPPSVGILQSEGQ 630
++G N FMD R+S KRKNAEG PG++ ++N +PP + +
Sbjct: 117 SADEYGTNSHFMDNARSSYKRKNAEGNPGNFHYLNASASSSS---SVPPMNT-------R 166
Query: 631 LESGAAVLEATASVPPEYGVNGVSLI--XXXXXXXXXXXXXLQVESPMLLNPNHLAQGNY 804
G A+++AT+ P Y S I + ++ + NPNH QGNY
Sbjct: 167 HPEGVALMDATSFTLPHYRGTSASSIREVGSQRSVRNRLGSVGLDPALTHNPNHFIQGNY 226
Query: 805 INQSFQP--AAWVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNVNGVSSEIASMGGQGYTD 975
+ Q +QP + W+EQ W TP + Y++G NVNGV E SMG Q Y +
Sbjct: 227 LGQPYQPGGSLWLEQHLSNGSTDAGASVWTQTPTIPYMHGNNVNGVPIETGSMGPQRYHE 286
Query: 976 AMNSRNSTVL--XXXXXXXXXXXXXXXXXXQAMHVHN-NFHIQATVPSFRHTTSNTLHHG 1146
++R++ Q + HN N QA SFR T+N
Sbjct: 287 PASNRSNASFSHPSPVNPQHHNFHHLSPPIQGIRGHNINILPQAPAASFRVPTANA-SQS 345
Query: 1147 TINHSPDDLEIGSRHPRPLPPN--RIYRPHRSGVHHAVPV-NSNRPHLRYMSED 1299
T+N S D L+IG R+P + P R+YRP GV + + N P LR + D
Sbjct: 346 TMNLSQDGLDIGLRNPGSVQPTGLRMYRPRHEGVAPETTLRHRNLPRLRVLPTD 399
Score = 165 bits (418), Expect = 4e-38
Identities = 80/132 (60%), Positives = 102/132 (77%), Gaps = 5/132 (3%)
Frame = +2
Query: 1448 VAILEIPGFYEVGNLIDRHRDMRLDIDDMSYEELLALGEQIGSVITGLPEETILRHLKTR 1627
VAIL P +YEV N D HRDMRLDI+DMSYEELLALGE+IG+V TGL + TI LKTR
Sbjct: 401 VAILGFPDYYEVENYADHHRDMRLDIEDMSYEELLALGERIGNVNTGLSDATIRSQLKTR 460
Query: 1628 VYISSASKDMNNEV-----ETGTCIVCQVEYRNQEKVGTLGCGHEYHADCIKKWLQVKNV 1792
Y+SS +N EV E +CI+CQ +Y+++EK+ +L CGHEYHADC+KKWL++KNV
Sbjct: 461 TYLSS-PYSINLEVSCMDQEADSCIICQDDYKSKEKIASLDCGHEYHADCLKKWLRLKNV 519
Query: 1793 CPICKVQAISVE 1828
CPICK +A+++E
Sbjct: 520 CPICKSEALTME 531
>emb|CBI20233.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 179 bits (455), Expect = 2e-42
Identities = 139/443 (31%), Positives = 201/443 (45%), Gaps = 32/443 (7%)
Frame = +1
Query: 58 MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
MG+RNM+CT Q++D+ +D++ QGH H V N P P+M+ +LSA G++SN D+
Sbjct: 1 MGQRNMMCTGQMIDLQMDERNQGH----HVISVTN---FPQPNMHSMLSAPGNSSNFDVR 53
Query: 238 HFANSHD-SSMFYG-SHFNGLQHRNPVTNMDLGVSSNFHSPCMIPPPVNRVFPISHVSCD 411
H +D S+MFYG +NG+QH +PV ++D+G PV+ I+H D
Sbjct: 54 HLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGF------------PVS----INHGPSD 97
Query: 412 QLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXXXLCI 591
QLP SS+HG+ V ++G + FMDGVR + KRKNAEG+ G++ ++N
Sbjct: 98 QLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYIN------------ 145
Query: 592 PPPSVGILQSEGQLESGAAVLEATASVPPEYGVNGVSLIXXXXXXXXXXXXXLQVESPML 771
G+ S S V + SV G G ++S +
Sbjct: 146 -----GLASSRNNAPSIMEV-GSHRSVRNRSGAVG-------------------LDSVLA 180
Query: 772 LNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP---------------- 897
N NHL QGNYI FQP+ WV+QQ G WN+ P
Sbjct: 181 HNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPYLHGILSSHIFVS 240
Query: 898 -MHYLNG--------RNVNGVSSEIASMGGQGYTDAMNSRNSTVLXXXXXXXXXXXXXXX 1050
+LNG N++G S E ++G QGY D + R +
Sbjct: 241 HFRFLNGSHLMTKSRSNISGGSREAGNVGIQGYHDTSSGRRA------------------ 282
Query: 1051 XXXQAMHVHNNFHIQATVPSFRHTTSNTLHHGTINHSPDDLEIGSRHPRPLPPN--RIYR 1224
++FH Q S+R T ++ G + +E G RHP P+PP RIYR
Sbjct: 283 --------RSHFHPQVVASSYRLPTISS--RGPVPPQV-GVEAGPRHPGPVPPTGIRIYR 331
Query: 1225 PHRSGV-HHAVPVNSNRPHLRYM 1290
+R GV A + N P+LR +
Sbjct: 332 SNRGGVAPEATSRHHNLPYLRML 354
Score = 179 bits (454), Expect = 3e-42
Identities = 86/131 (65%), Positives = 103/131 (78%), Gaps = 4/131 (3%)
Frame = +2
Query: 1442 KEVAILEIPGFYEVGNLIDRHRDMRLDIDDMSYEELLALGEQIGSVITGLPEETILRHLK 1621
+EVAIL++ FYEVG+LID HRDMRLDI+DMSYEELLALGE+IG V TGL EE+I LK
Sbjct: 357 EEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGERIGHVSTGLSEESITNCLK 416
Query: 1622 TRVYISSASKDMNN----EVETGTCIVCQVEYRNQEKVGTLGCGHEYHADCIKKWLQVKN 1789
TR YISS ++ ++E +CI+CQ EYRNQEK+G L CGHEYHA C+KKWL VKN
Sbjct: 417 TRTYISSTCLNLEEAASMDLENDSCIICQEEYRNQEKIGFLDCGHEYHAGCLKKWLLVKN 476
Query: 1790 VCPICKVQAIS 1822
VCPICK A++
Sbjct: 477 VCPICKAPAMT 487