BLASTX nr result

ID: Coptis25_contig00010751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010751
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vi...    90   2e-16
ref|XP_003602060.1| N-glycosylase/DNA lyase [Medicago truncatula...    85   7e-15
ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Rici...    82   5e-14
ref|XP_004171524.1| PREDICTED: N-glycosylase/DNA lyase-like, par...    82   6e-14
ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cuc...    82   6e-14

>ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vinifera]
          Length = 399

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = -3

Query: 221 PKTPCTSQTIT--WQPLNISKTELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQL 48
           P+TP  +  I+  W PLNI+K+EL L LTFPTGQTFRWKQT   QYTGVI SHL+SLK L
Sbjct: 53  PQTPPPTTPISPKWVPLNIAKSELSLALTFPTGQTFRWKQTTPLQYTGVIGSHLISLKHL 112

Query: 47  DSGNGDVAFYVHRT 6
              NGDVA+ +H++
Sbjct: 113 Q--NGDVAYLIHQS 124


>ref|XP_003602060.1| N-glycosylase/DNA lyase [Medicago truncatula]
           gi|357520327|ref|XP_003630452.1| N-glycosylase/DNA lyase
           [Medicago truncatula] gi|355491108|gb|AES72311.1|
           N-glycosylase/DNA lyase [Medicago truncatula]
           gi|355524474|gb|AET04928.1| N-glycosylase/DNA lyase
           [Medicago truncatula]
          Length = 420

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/83 (55%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
 Frame = -3

Query: 227 LIPKTPCTSQTIT-----------WQPLNISKTELYLPLTFPTGQTFRWKQTGVYQYTGV 81
           L P TP T  T T           W PLNI++ EL LPLTFPTGQTFRWK T   QYTGV
Sbjct: 16  LPPSTPPTPHTQTRHSTNLSKSRAWIPLNITRQELSLPLTFPTGQTFRWKNTAPSQYTGV 75

Query: 80  IKSHLVSLKQLDSGNGDVAFYVH 12
           + SHL+SLK L   NGDV + +H
Sbjct: 76  VGSHLISLKHLH--NGDVCYTLH 96


>ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
           gi|223540555|gb|EEF42122.1| 8-oxoguanine DNA
           glycosylase, putative [Ricinus communis]
          Length = 412

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/64 (57%), Positives = 48/64 (75%)
 Frame = -3

Query: 197 TITWQPLNISKTELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDSGNGDVAFY 18
           T  W  LN++++EL LPLTFPTGQTFRWKQTG +QYTG +  HL+SLK     NG+V ++
Sbjct: 46  TTNWNALNLTQSELSLPLTFPTGQTFRWKQTGHHQYTGTLGPHLISLKH-HHQNGNVYYH 104

Query: 17  VHRT 6
           +H T
Sbjct: 105 IHTT 108


>ref|XP_004171524.1| PREDICTED: N-glycosylase/DNA lyase-like, partial [Cucumis sativus]
          Length = 359

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/69 (52%), Positives = 52/69 (75%)
 Frame = -3

Query: 218 KTPCTSQTITWQPLNISKTELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDSG 39
           K+P +  +  W  LN+++++L LPLTFPTGQTFRWKQT  +++TGV+ SHL+SL  L   
Sbjct: 20  KSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPFEFTGVVGSHLISLNHLP-- 77

Query: 38  NGDVAFYVH 12
           NGDV++ +H
Sbjct: 78  NGDVSYCLH 86


>ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cucumis sativus]
          Length = 393

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/69 (52%), Positives = 52/69 (75%)
 Frame = -3

Query: 218 KTPCTSQTITWQPLNISKTELYLPLTFPTGQTFRWKQTGVYQYTGVIKSHLVSLKQLDSG 39
           K+P +  +  W  LN+++++L LPLTFPTGQTFRWKQT  +++TGV+ SHL+SL  L   
Sbjct: 54  KSPQSPSSSNWVSLNLTRSDLSLPLTFPTGQTFRWKQTNPFEFTGVVGSHLISLNHLP-- 111

Query: 38  NGDVAFYVH 12
           NGDV++ +H
Sbjct: 112 NGDVSYCLH 120


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