BLASTX nr result

ID: Coptis25_contig00010741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010741
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    93   2e-17
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group] g...    84   9e-15
gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indi...    84   9e-15

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/169 (43%), Positives = 97/169 (57%)
 Frame = -2

Query: 512 LSSSTGNLYFDLCTLFGIGYDWNYLSKNSDSLWEGKDRFINTVDQIMQLYRSPKLYSFKV 333
           LS    +L FD+ TLFG             +  E   +F+  VDQ++   R PK+ + KV
Sbjct: 38  LSPPLSHLQFDVFTLFG-------------THGESSSKFVTAVDQVLLACRGPKIGTVKV 84

Query: 332 SYCLGNECASHIDRWISFAVRMQIEKIDLDFSFIPRGCEKYKFPCHLLAQDKGSQLKHLS 153
            + LG++ A H+DRW+SF+  MQ+EKI  DFS  P+ C  Y FPCH+L  DK S LKHL 
Sbjct: 85  RFGLGDDHAFHVDRWVSFSSAMQVEKIAFDFSCSPKSCGSYNFPCHILPADKASHLKHLC 144

Query: 152 LESCVLSPSPDFTNRFFSLKTLDLIRVPLDQIAFDSLLSGCINLECMTL 6
           L SC L  SP FT++   L+TLDL  VPLDQ   D + S C  L  + +
Sbjct: 145 LVSCTLRLSPKFTSQLNPLRTLDLDGVPLDQSGLDIITSACPKLTLLRM 193


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 71/178 (39%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
 Frame = -2

Query: 491  LYFDLCTLFGIGYDWNYLSKNSDSLWEGKD--RFINTVDQIMQLYRS--PKLYSFKVSYC 324
            L+FD  ++ GIG     +S N   L       +F+  VDQ M  YRS  PK+ SF + + 
Sbjct: 1360 LWFDAASVLGIGDCSXSMSGNQPELNSQMQSXKFVERVDQFMY-YRSQGPKINSFSIHFP 1418

Query: 323  LGNECASHIDRWISFAVRMQIEKIDLD----FSF-------IPRGCEKYKFPCHLLAQDK 177
            LG E  SHID+WI+ AV   +E IDLD    FSF            + Y+FPC L +   
Sbjct: 1419 LGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPG 1478

Query: 176  G-SQLKHLSLESCVLSPSPDFTNRFFSLKTLDLIRVPLDQIAFDSLLSGCINLECMTL 6
            G   LKHL L SC LS  P  +N   SL T+DL RV +       LLS C +LE ++L
Sbjct: 1479 GRCTLKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQLQDLLSTCSHLERLSL 1535


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 70/178 (39%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
 Frame = -2

Query: 491 LYFDLCTLFGIGYDWNYLSKNSDSLWEG--KDRFINTVDQIMQLYRSP--KLYSFKVSYC 324
           L+FD  ++ GIG     +S N   L       +F+  VDQ M  YRS   K+ SF + + 
Sbjct: 58  LWFDAASVLGIGDCSTSMSGNQPELNSQMQSSKFVERVDQFMY-YRSQGRKINSFSIHFP 116

Query: 323 LGNECASHIDRWISFAVRMQIEKIDLD----FSF-------IPRGCEKYKFPCHLLAQDK 177
           LG E  SHID+WI+ AV   +E IDLD    FSF            + Y+FPC L +   
Sbjct: 117 LGKEFMSHIDQWITCAVMKGVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPG 176

Query: 176 G-SQLKHLSLESCVLSPSPDFTNRFFSLKTLDLIRVPLDQIAFDSLLSGCINLECMTL 6
           G   LKHL L SC LS  P  +N   SL T+DL RV +       LLS C +LE ++L
Sbjct: 177 GRCTLKHLRLASCHLSALPS-SNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSL 233


>ref|NP_001176770.1| Os12g0127400 [Oryza sativa Japonica Group]
           gi|77553566|gb|ABA96362.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|125578377|gb|EAZ19523.1| hypothetical protein
           OsJ_35088 [Oryza sativa Japonica Group]
           gi|255670007|dbj|BAH95498.1| Os12g0127400 [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
 Frame = -2

Query: 494 NLYFDLCTLFGIGYDWNYLSKNSDSLWEGKDRFINTVDQIMQLYRSPKLYSFKVSYCLGN 315
           NLYF + T+ G        S + +      ++FI  VD I++ +    +  F V + L N
Sbjct: 100 NLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGTMVNKFAVKFGLSN 159

Query: 314 ECASHIDRWISFAVRMQIEKIDLDFSFIPRGCE-KYKFPCHLLAQDKGSQLKHLSLESCV 138
           E A+H++ W++FA+  +   I LDFS   +  E  Y FPCH+  +  GS L+ L L+S  
Sbjct: 160 EHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHNGSYLEALRLDSVT 219

Query: 137 LSPSPDFTNRFFSLKTLDLIRVPLDQIAFDSLLSGCINLECMTLE 3
           L+P  DF   F +LK L L  V L  +  + L+S C  LE ++++
Sbjct: 220 LNPPLDFCG-FANLKLLALDNVRLQHL--EQLISKCHVLEWLSIQ 261


>gb|EAY82142.1| hypothetical protein OsI_37336 [Oryza sativa Indica Group]
          Length = 446

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
 Frame = -2

Query: 494 NLYFDLCTLFGIGYDWNYLSKNSDSLWEGKDRFINTVDQIMQLYRSPKLYSFKVSYCLGN 315
           NLYF + T+ G        S + +      ++FI  VD I++ +    +  F V + L N
Sbjct: 100 NLYFGIKTVLGNNAKRKGTSSDLNCRISSANKFIKRVDAILEKHCGTMVNKFAVKFGLSN 159

Query: 314 ECASHIDRWISFAVRMQIEKIDLDFSFIPRGCE-KYKFPCHLLAQDKGSQLKHLSLESCV 138
           E A+H++ W++FA+  +   I LDFS   +  E  Y FPCH+  +  GS L+ L L+S  
Sbjct: 160 EHANHVNGWVAFAIASKARVIILDFSPDWKSHENNYDFPCHIFDKHNGSYLEALRLDSVT 219

Query: 137 LSPSPDFTNRFFSLKTLDLIRVPLDQIAFDSLLSGCINLECMTLE 3
           L+P  DF   F +LK L L  V L  +  + L+S C  LE ++++
Sbjct: 220 LNPPLDFCG-FANLKLLALDNVRLQHL--EQLISKCHVLEWLSIQ 261


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