BLASTX nr result

ID: Coptis25_contig00010739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010739
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 k...   385   e-104
ref|NP_001045073.1| Os01g0895100 [Oryza sativa Japonica Group] g...   384   e-104
gb|EEC71949.1| hypothetical protein OsI_04768 [Oryza sativa Indi...   384   e-104
gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays] gi|...   382   e-103
ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea ma...   382   e-103

>ref|XP_002276816.1| PREDICTED: probable membrane-associated 30 kDa protein, chloroplastic
            [Vitis vinifera] gi|297735245|emb|CBI17607.3| unnamed
            protein product [Vitis vinifera]
          Length = 324

 Score =  385 bits (988), Expect = e-104
 Identities = 217/327 (66%), Positives = 249/327 (76%), Gaps = 10/327 (3%)
 Frame = +1

Query: 151  MAIRAPPVTGLCLAXXXXXXXXXNRIVFLRNSFLSGGV--LKVARLPLP-PNRFRCNG-- 315
            MA + P   GL LA          R + L+++F   GV  LKV  + +   + +RCNG  
Sbjct: 1    MATKVPIGAGLSLASPPCASNV--RSLVLKSAFFGHGVGALKVRGIRIARSSTYRCNGHG 58

Query: 316  -----VRMNLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMAS 480
                  +MNLFDRFARVVKSYANA++S+FEDPEKILEQ+VLEMNDDLTKMRQATAQV+AS
Sbjct: 59   GGALGTQMNLFDRFARVVKSYANAVLSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLAS 118

Query: 481  QKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKTQLDQQKT 660
            QK+LEN+ K+AQQASEDWY+RAQLAL KGDE+LAREALKRRKSYADNAS++K QLDQQKT
Sbjct: 119  QKQLENRYKAAQQASEDWYKRAQLALGKGDEDLAREALKRRKSYADNASALKAQLDQQKT 178

Query: 661  VVDNLVSNTRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEE 840
            VV+NLVSNTRLLESKIQEA+SKKD              V+EMLG VNTSSALSAF+KMEE
Sbjct: 179  VVENLVSNTRLLESKIQEAKSKKDTLKARAQSAKTASKVSEMLGNVNTSSALSAFEKMEE 238

Query: 841  KVLAMESQAEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXXXXXXXXPPGRTTVS 1020
            KVLAMESQAEAL QL TDDLEGKFA+LE+SSVDDDLA+              PPGRT V+
Sbjct: 239  KVLAMESQAEALNQLTTDDLEGKFALLESSSVDDDLASLKKELSGSSKKGELPPGRTAVA 298

Query: 1021 STNTPFPFADTEIDKELNELRRKVKEF 1101
            S NT FPF D+EI+KELNELRRK  EF
Sbjct: 299  S-NTAFPFRDSEIEKELNELRRKASEF 324


>ref|NP_001045073.1| Os01g0895100 [Oryza sativa Japonica Group]
            gi|44888076|sp|Q8S0J7.1|IM30_ORYSJ RecName: Full=Probable
            membrane-associated 30 kDa protein, chloroplastic; Flags:
            Precursor gi|20161290|dbj|BAB90216.1| putative
            membrane-associated 30 kDa protein, chloroplast precursor
            [Oryza sativa Japonica Group] gi|21952843|dbj|BAC06258.1|
            putative chloroplast membrane-associated 30 kD protein
            [Oryza sativa Japonica Group]
            gi|113534604|dbj|BAF06987.1| Os01g0895100 [Oryza sativa
            Japonica Group] gi|125572953|gb|EAZ14468.1| hypothetical
            protein OsJ_04390 [Oryza sativa Japonica Group]
            gi|215695356|dbj|BAG90547.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215765055|dbj|BAG86752.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 317

 Score =  384 bits (986), Expect = e-104
 Identities = 212/319 (66%), Positives = 244/319 (76%), Gaps = 2/319 (0%)
 Frame = +1

Query: 151  MAIRAPPVTGLCLAXXXXXXXXXNRIVFLRNSFLSGGV-LKVARLPLPP-NRFRCNGVRM 324
            M IRAPP T L LA          R   LR SFL+G V L++ ++     NRF+CNG+R 
Sbjct: 1    MEIRAPP-TSLRLAPPPPASASFRRTA-LRTSFLNGSVSLRLIQVRQSNVNRFKCNGIRS 58

Query: 325  NLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLENKC 504
            NL DRF+RVVKSYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLENK 
Sbjct: 59   NLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKY 118

Query: 505  KSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKTQLDQQKTVVDNLVSN 684
            K+A+QAS+DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+K QLDQQK VV+NLVSN
Sbjct: 119  KAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSN 178

Query: 685  TRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAMESQ 864
            TR+LESKI EA+ KKD              V+EMLG VNTS ALSAF+KMEEKV+AMESQ
Sbjct: 179  TRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQ 238

Query: 865  AEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXXXXXXXXPPGRTTVSSTNTPFPF 1044
            AEAL QLATDDLEGKFA+LETSSVDDDLA               PPGRT VS++    PF
Sbjct: 239  AEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPF 298

Query: 1045 ADTEIDKELNELRRKVKEF 1101
             D EI+ ELNELR+K  E+
Sbjct: 299  RDIEIENELNELRKKANEY 317


>gb|EEC71949.1| hypothetical protein OsI_04768 [Oryza sativa Indica Group]
          Length = 317

 Score =  384 bits (985), Expect = e-104
 Identities = 212/319 (66%), Positives = 244/319 (76%), Gaps = 2/319 (0%)
 Frame = +1

Query: 151  MAIRAPPVTGLCLAXXXXXXXXXNRIVFLRNSFLSGGV-LKVARLPLPP-NRFRCNGVRM 324
            M IRAPP T L LA          R   LR SFL+G V L++ ++     NRF+CNG+R 
Sbjct: 1    MEIRAPP-TSLRLAPPPPASASFRRTA-LRTSFLNGSVSLRLIQVRQSNVNRFKCNGIRS 58

Query: 325  NLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLENKC 504
            NL DRF+RVVKSYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLENK 
Sbjct: 59   NLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKY 118

Query: 505  KSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKTQLDQQKTVVDNLVSN 684
            KSA+QAS+DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+K QLDQQK VV+NLVSN
Sbjct: 119  KSAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSN 178

Query: 685  TRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAMESQ 864
            T++LESKI EA+ KKD              V+EMLG VNTS ALSAF+KMEEKV+AMESQ
Sbjct: 179  TQVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALSAFEKMEEKVMAMESQ 238

Query: 865  AEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXXXXXXXXPPGRTTVSSTNTPFPF 1044
            AEAL QLATDDLEGKFA+LETSSVDDDLA               PPGRT VS++    PF
Sbjct: 239  AEALGQLATDDLEGKFALLETSSVDDDLAQMKKEISGSSSKGELPPGRTAVSNSGAARPF 298

Query: 1045 ADTEIDKELNELRRKVKEF 1101
             D EI+ ELNELR+K  E+
Sbjct: 299  LDIEIENELNELRKKANEY 317


>gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays]
            gi|219884263|gb|ACL52506.1| unknown [Zea mays]
          Length = 316

 Score =  382 bits (982), Expect = e-103
 Identities = 213/319 (66%), Positives = 243/319 (76%), Gaps = 2/319 (0%)
 Frame = +1

Query: 151  MAIRAPPVTGLCLAXXXXXXXXXNRIVFLRNSFLSGGV-LKVARLPLPP-NRFRCNGVRM 324
            M IRAPP T L LA          R   LR SFL G V LKV ++     NRF+CN +R 
Sbjct: 1    MEIRAPP-TSLRLAPPPASASF--RRTPLRTSFLRGSVSLKVVQVRQSNVNRFKCNSIRS 57

Query: 325  NLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLENKC 504
            NLFDR  RVV+SYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLENK 
Sbjct: 58   NLFDRLTRVVRSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKS 117

Query: 505  KSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKTQLDQQKTVVDNLVSN 684
            K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+++QLDQQK VV+NL+SN
Sbjct: 118  KAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNASSLRSQLDQQKGVVENLISN 177

Query: 685  TRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAMESQ 864
            TRLLESKI EA+ KKD              V+EMLG VNTSSALSAF+KMEEKV+AMESQ
Sbjct: 178  TRLLESKISEAKQKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQ 237

Query: 865  AEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXXXXXXXXPPGRTTVSSTNTPFPF 1044
            AEAL QLATDDLEGKFA+LETSSVDDDL+               PPGRT VS++    PF
Sbjct: 238  AEALGQLATDDLEGKFALLETSSVDDDLSQLKKELSGSSLKGELPPGRTAVSNSGAGRPF 297

Query: 1045 ADTEIDKELNELRRKVKEF 1101
             D EI+ ELNELRRK KE+
Sbjct: 298  PDLEIESELNELRRKAKEY 316


>ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea mays]
            gi|194688738|gb|ACF78453.1| unknown [Zea mays]
            gi|194701220|gb|ACF84694.1| unknown [Zea mays]
            gi|414879244|tpg|DAA56375.1| TPA: IM30 protein-like
            protein [Zea mays]
          Length = 316

 Score =  382 bits (980), Expect = e-103
 Identities = 213/319 (66%), Positives = 243/319 (76%), Gaps = 2/319 (0%)
 Frame = +1

Query: 151  MAIRAPPVTGLCLAXXXXXXXXXNRIVFLRNSFLSGGV-LKVARLPLPP-NRFRCNGVRM 324
            M IRAPP T L LA          R   LR SFL G V LKV ++     NRF+CN +R 
Sbjct: 1    MEIRAPP-TSLRLAPPPAAASF--RRTPLRTSFLRGSVSLKVVQVRQSNVNRFKCNSIRS 57

Query: 325  NLFDRFARVVKSYANAIISTFEDPEKILEQSVLEMNDDLTKMRQATAQVMASQKRLENKC 504
            NLFDR  RVV+SYANA++S+FEDPEKIL+Q+VLEMNDDLTKMRQATAQV+ASQKRLENK 
Sbjct: 58   NLFDRLTRVVRSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKY 117

Query: 505  KSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNASSMKTQLDQQKTVVDNLVSN 684
            K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNASS+++QLDQQK VV+NL+SN
Sbjct: 118  KAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNASSLRSQLDQQKGVVENLISN 177

Query: 685  TRLLESKIQEARSKKDXXXXXXXXXXXXXXVNEMLGTVNTSSALSAFDKMEEKVLAMESQ 864
            TRLLESKI EA+ KKD              V+EMLG VNTSSALSAF+KMEEKV+AMESQ
Sbjct: 178  TRLLESKIAEAKQKKDTLKARAQSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQ 237

Query: 865  AEALTQLATDDLEGKFAMLETSSVDDDLANXXXXXXXXXXXXXXPPGRTTVSSTNTPFPF 1044
            AEAL QLATDDLEGKFA+LETSSVDDDL+               PPGRT VS++    PF
Sbjct: 238  AEALGQLATDDLEGKFALLETSSVDDDLSQLKKELSGSSLKGELPPGRTAVSNSGAGRPF 297

Query: 1045 ADTEIDKELNELRRKVKEF 1101
             D EI+ ELNELRRK KE+
Sbjct: 298  PDLEIESELNELRRKAKEY 316


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