BLASTX nr result

ID: Coptis25_contig00010734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010734
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-70
emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]    91   2e-32
emb|CBI26021.3| unnamed protein product [Vitis vinifera]               89   1e-31
dbj|BAC20770.1| hypothetical protein [Oryza sativa Japonica Grou...    63   3e-23
ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [S...    60   3e-23

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  151 bits (382), Expect(3) = 1e-70
 Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 4/174 (2%)
 Frame = +1

Query: 214 ISQMPEDILSF----LTISDAVKTRVLSPKWRYLSSSTGNLYFDLCTLFGISYNWNYLPK 381
           IS++ +DILSF    LT+ DAVKTR+LS +WRYLS    +L FD+ TLFG          
Sbjct: 5   ISELSDDILSFILSFLTMQDAVKTRLLSHRWRYLSPPLSHLQFDVFTLFGTH-------- 56

Query: 382 NSDSLWEGKDRFINAVDQIMQLYRSPKLYSFKVSYFLGNECASHIDRWISFAVRMQIEKI 561
                 E   +F+ AVDQ++   R PK+ + KV + LG++ A H+DRW+SF+  MQ+EKI
Sbjct: 57  -----GESSSKFVTAVDQVLLACRGPKIGTVKVRFGLGDDHAFHVDRWVSFSSAMQVEKI 111

Query: 562 DLDFSCISRGCENYKFSCHLLAQDKASQLKHLSLQSCVLSPFPDLTNHFISLKT 723
             DFSC  + C +Y F CH+L  DKAS LKHL L SC L   P  T+    L+T
Sbjct: 112 AFDFSCSPKSCGSYNFPCHILPADKASHLKHLCLVSCTLRLSPKFTSQLNPLRT 165



 Score = 98.6 bits (244), Expect(3) = 1e-70
 Identities = 67/165 (40%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
 Frame = +3

Query: 1005 SGLAKELPDLQVLSLVLFTIQVLPIPANMTEFSHLKELKLVLILSSDFDLLSVASILNAS 1184
            + LAK+LP LQ LSL++   +VLP+PA   +F  LK+L L++    D DLL+V  +LNAS
Sbjct: 269  NALAKDLPQLQFLSLIVKD-EVLPLPATSPKFISLKQLDLLIWPFIDSDLLTVIYLLNAS 327

Query: 1185 PCLLKFHLSL-RHGSGSFRGPRVKMYYSKKLYYQLKEVEISGFCDRCDALELAIYLLNSA 1361
            P L    L + R G G   G R +  YS+  +  LKEV++ GF D+ +A+ELAIYLL + 
Sbjct: 328  PLLEILQLKIGRQGEGRSNGERRE--YSRHTHSHLKEVKMEGFRDKWNAMELAIYLLKNT 385

Query: 1362 IGLERMILEFQKRCRSIDEELEMKKKQVHRVLLKEKPN--VEIIV 1490
            I LERM++        +D      +++V  +L KE+ N   E+I+
Sbjct: 386  IALERMVVVVSGSTLQMD-----LRQRVTNLLQKERGNSTAELII 425



 Score = 66.2 bits (160), Expect(3) = 1e-70
 Identities = 37/94 (39%), Positives = 53/94 (56%)
 Frame = +2

Query: 710 SP*KPLDLIRVPLDQSAFDSLLSGCINLECMTLEDCSLPASLFVCGNLLYLKSLVLKTCD 889
           +P + LDL  VPLDQS  D + S C  L  + +  C LP  + + G LL LK+L++   D
Sbjct: 161 NPLRTLDLDGVPLDQSGLDIITSACPKLTLLRMIGCGLPKIVCIHGQLLCLKTLIIH--D 218

Query: 890 GPMEVELSSINLTSFQYIGRTKNLRFVGAVSIEK 991
             + VEL SINL  F++ G  + L FV    ++K
Sbjct: 219 SLISVELKSINLEIFEFFGHPRKLTFVDVPHLKK 252


>emb|CAN81149.1| hypothetical protein VITISV_020815 [Vitis vinifera]
          Length = 1789

 Score = 91.3 bits (225), Expect(3) = 2e-32
 Identities = 70/191 (36%), Positives = 96/191 (50%), Gaps = 23/191 (12%)
 Frame = +1

Query: 220  QMPEDILS----FLTISDAVKTRVLSPKWRYLSSSTGNLYFDLCTLFGI-----SYNWNY 372
            ++P+DILS     L + +AV+T +LS +WR + +    L+FD  ++ GI     S + N 
Sbjct: 1322 ELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCSXSMSGNQ 1381

Query: 373  LPKNSDSLWEGKDRFINAVDQIMQLYRS--PKLYSFKVSYFLGNECASHIDRWISFAVRM 546
               NS        +F+  VDQ M  YRS  PK+ SF + + LG E  SHID+WI+ AV  
Sbjct: 1382 PELNSQMQ---SXKFVERVDQFMY-YRSQGPKINSFSIHFPLGKEFMSHIDQWITCAVMK 1437

Query: 547  QIEKIDLDFS-----------CISRGCENYKFSCHLLA-QDKASQLKHLSLQSCVLSPFP 690
             +E IDLD S             S   + Y+F C L +       LKHL L SC LS  P
Sbjct: 1438 GVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALP 1497

Query: 691  DLTNHFISLKT 723
              +N   SL T
Sbjct: 1498 S-SNTLTSLIT 1507



 Score = 53.9 bits (128), Expect(3) = 2e-32
 Identities = 36/130 (27%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
 Frame = +3

Query: 1017 KELPDLQVLSLV-LFTIQVLPIPANMTEFSHLKELKLVLILSSDFDLLS-VASILNASPC 1190
            ++LP L+ L L+ + T++ L +P N   F+++K+ +L +    D D LS +  IL A P 
Sbjct: 1620 QDLPQLETLKLLSVLTLKKLQLPENGPTFTNIKQFELTVFPFDDDDDLSWIGYILKAFPL 1679

Query: 1191 LLKFHLSLRHGSGSFRGPRVKMYYSKKLYYQLKEVEISGFCDRCDALELAIYLLNSAIGL 1370
            L K  L+L   S + +   ++ +  +  +  L  ++I+GF      ++L  YLL++ + L
Sbjct: 1680 LQKLELNLFSPSFTKQPKEIERFLPECPHRHLSILQINGFYGNQHEVDLLKYLLHNLVAL 1739

Query: 1371 ERMILEFQKR 1400
            E +++   K+
Sbjct: 1740 ELLVVAPSKK 1749



 Score = 42.4 bits (98), Expect(3) = 2e-32
 Identities = 28/94 (29%), Positives = 44/94 (46%)
 Frame = +2

Query: 725  LDLIRVPLDQSAFDSLLSGCINLECMTLEDCSLPASLFVCGNLLYLKSLVLKTCDGPMEV 904
            +DL RV +       LLS C +LE ++L  C+   +L      L LK L +K C     +
Sbjct: 1508 VDLQRVNISDQQLQDLLSTCSHLERLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETI 1567

Query: 905  ELSSINLTSFQYIGRTKNLRFVGAVSIEKVRLWF 1006
            E+ + +L +F+Y G   +  F     + K  L F
Sbjct: 1568 EIHAADLVTFKYGGHLPSFSFKNVPKLAKASLEF 1601


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score = 88.6 bits (218), Expect(3) = 1e-31
 Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
 Frame = +1

Query: 220 QMPEDILS----FLTISDAVKTRVLSPKWRYLSSSTGNLYFDLCTLFGISYNWNYLPKNS 387
           ++P+DILS     L + +AV+T +LS +WR + +    L+FD  ++ GI      +  N 
Sbjct: 20  ELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCSTSMSGNQ 79

Query: 388 DSLWEG--KDRFINAVDQIMQLYRSP--KLYSFKVSYFLGNECASHIDRWISFAVRMQIE 555
             L       +F+  VDQ M  YRS   K+ SF + + LG E  SHID+WI+ AV   +E
Sbjct: 80  PELNSQMQSSKFVERVDQFMY-YRSQGRKINSFSIHFPLGKEFMSHIDQWITCAVMKGVE 138

Query: 556 KIDLDFS-----------CISRGCENYKFSCHLLA-QDKASQLKHLSLQSCVLSPFPDLT 699
            IDLD S             S   + Y+F C L +       LKHL L SC LS  P  +
Sbjct: 139 NIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALPS-S 197

Query: 700 NHFISLKT 723
           N   SL T
Sbjct: 198 NTLTSLIT 205



 Score = 53.5 bits (127), Expect(3) = 1e-31
 Identities = 36/130 (27%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
 Frame = +3

Query: 1017 KELPDLQVLSLV-LFTIQVLPIPANMTEFSHLKELKLVLILSSDFDLLS-VASILNASPC 1190
            ++LP L+ L L+ + T++ L +P N   F+++K+ +L +    D D LS +  IL A P 
Sbjct: 318  QDLPQLETLKLLSVLTLKKLQLPENGPTFTNVKQFELTVFPFDDDDDLSWIGYILKAFPL 377

Query: 1191 LLKFHLSLRHGSGSFRGPRVKMYYSKKLYYQLKEVEISGFCDRCDALELAIYLLNSAIGL 1370
            L K  L+L   S + +   ++ +  +  +  L  ++I+GF      ++L  YLL++ + L
Sbjct: 378  LQKLELNLFSPSFTKQPKEIERFLPECPHRHLSILQINGFYGNQHEVDLLKYLLHNLVAL 437

Query: 1371 ERMILEFQKR 1400
            E +++   K+
Sbjct: 438  ELLVVAPSKK 447



 Score = 42.7 bits (99), Expect(3) = 1e-31
 Identities = 28/94 (29%), Positives = 44/94 (46%)
 Frame = +2

Query: 725  LDLIRVPLDQSAFDSLLSGCINLECMTLEDCSLPASLFVCGNLLYLKSLVLKTCDGPMEV 904
            +DL RV +       LLS C +LE ++L  C+   +L      L LK L +K C     +
Sbjct: 206  VDLQRVNISDQQLQDLLSTCSHLEWLSLCVCNGLVNLSFSALNLQLKFLSIKNCFRLETI 265

Query: 905  ELSSINLTSFQYIGRTKNLRFVGAVSIEKVRLWF 1006
            E+ + +L +F+Y G   +  F     + K  L F
Sbjct: 266  EIHAADLVTFKYGGHLPSFSFKNVPKLAKASLEF 299


>dbj|BAC20770.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125599211|gb|EAZ38787.1| hypothetical protein
           OsJ_23190 [Oryza sativa Japonica Group]
          Length = 515

 Score = 62.8 bits (151), Expect(3) = 3e-23
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
 Frame = +1

Query: 172 LSGEQRQRR*SYQIISQMPEDIL----SFLTISDAVKTRVLSPKWRYLSSSTGNLYFDLC 339
           L G+  +R+     +S +PEDIL    S L + +A +T +LS +W     S  NL     
Sbjct: 13  LHGQMMKRKKWRLQLSNLPEDILCTIVSKLPLREAARTSILSSQWNRTWCSHTNLNLSYR 72

Query: 340 TLFGISYNWNYLPKNSDSLWEGKDRFINAVDQIMQLYRSPKLYSFKVSYFLGNECASHID 519
           ++    Y    +      L    + FI  VD I+Q +    +   +V   L NE A HI+
Sbjct: 73  SIMSRRYIERDIRPEGRKL--NAEEFIRRVDAILQQHNGGGVEKIEVIGLLENENAYHIN 130

Query: 520 RWISFAVRMQIEKIDLDFSCISRGC-ENYKFSCHLLAQDKASQLKHLSLQSCVLSPFPD 693
            W++FA++ + +++ LDF        E Y F+  +        L+ L L S  L P  D
Sbjct: 131 GWVNFAIKSKTKQLVLDFRSFHWPIDEPYNFAFQIFDAANMENLQSLKLGSISLKPPAD 189



 Score = 57.4 bits (137), Expect(3) = 3e-23
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
 Frame = +3

Query: 1011 LAKELPDLQVLSLVLFTIQVLPIPANMTEFSHLKELKLVLILSS----DFDLLSVASILN 1178
            L   LP L++L+L    ++ + +P    +F +LK L+L L  S     D D+L  A IL 
Sbjct: 305  LPSTLPRLEMLTLQCRELERITLPDKPIKFIYLKHLRLELAFSGPRKWDADILDFACILE 364

Query: 1179 ASPCLLKF----------HLSLRHGSGSFRGPRVKMYYSKKLYYQLKEVEISGFCDRCDA 1328
            A+P + K           HL  R   G  R            +Y LKEV I+GF  + D 
Sbjct: 365  AAPLMEKLEFHMWMNCRDHLRYRKAHGKLRT------LPPCPHYHLKEVNIAGFYGQKDQ 418

Query: 1329 LELAIYLLNSAIGLERMILE 1388
            LELA ++L +++ L+ M ++
Sbjct: 419  LELAHHILRNSVVLQAMNID 438



 Score = 36.2 bits (82), Expect(3) = 3e-23
 Identities = 27/76 (35%), Positives = 36/76 (47%)
 Frame = +2

Query: 719 KPLDLIRVPLDQSAFDSLLSGCINLECMTLEDCSLPASLFVCGNLLYLKSLVLKTCDGPM 898
           K L L+ V +       LLS C  LE + +  C L  SL        LK L +  C    
Sbjct: 197 KRLKLLDVGITDEDLQLLLSNCNCLEFLGIYCCKLITSLRTTHLSTQLKHLYVYECPCLK 256

Query: 899 EVELSSINLTSFQYIG 946
           E+EL+S  LT+ +YIG
Sbjct: 257 EIELNS-GLTTLEYIG 271


>ref|XP_002453394.1| hypothetical protein SORBIDRAFT_04g005220 [Sorghum bicolor]
           gi|241933225|gb|EES06370.1| hypothetical protein
           SORBIDRAFT_04g005220 [Sorghum bicolor]
          Length = 494

 Score = 59.7 bits (143), Expect(3) = 3e-23
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
 Frame = +1

Query: 235 ILSFLTISDAVKTRVLSPKWRYLSSSTGNLYFDLCTLFGISYNWNYLPKNSDSLWEG--K 408
           ILS L I+DAV+T VLS K +++  S  NL FD  T+        Y  + S   + G   
Sbjct: 10  ILSLLPINDAVRTSVLSRKLKHVWRSHTNLNFDTGTM-----RKGYF-RPSKGYYSGLKD 63

Query: 409 DRFINAVDQIMQLYRSPKLYSFKVSYFLGNECASHIDRWISFAVRMQIEKIDLDFSCISR 588
           + F+  VD ++Q +    +   K+ + L ++ A HID W+S A+  + ++  ++ S  SR
Sbjct: 64  NEFVTRVDTVVQQHNGTGVEHMKIRFRLHSKHADHIDSWVSVAIASKTKEFVINLSGGSR 123

Query: 589 GC--------------ENYKFSCHLLAQDKASQLKHLSLQSCVL 678
           G               E Y F     + +  S L+ L L S  L
Sbjct: 124 GIFFLRGGRIRRMVGEEPYSFPSQFFSPNNCSHLRCLELWSVSL 167



 Score = 49.3 bits (116), Expect(3) = 3e-23
 Identities = 33/102 (32%), Positives = 51/102 (50%)
 Frame = +2

Query: 719  KPLDLIRVPLDQSAFDSLLSGCINLECMTLEDCSLPASLFVCGNLLYLKSLVLKTCDGPM 898
            K L L+ V +       +LS C  LE + +  CS+  S+ +   L  L  LV+  C    
Sbjct: 180  KSLTLVDVSITDEDVQCILSTCNLLEFLEISYCSMVTSIRMLHPLDRLMHLVVDICRKLQ 239

Query: 899  EVELSSINLTSFQYIGRTKNLRFVGAVSIEKVRLWFRTCKRA 1024
            E+EL + +LT+FQY GRT  L+F     +  + + F T + A
Sbjct: 240  EIEL-NCSLTTFQYSGRTVPLKFASTSRLTNINVVFLTDQSA 280



 Score = 47.4 bits (111), Expect(3) = 3e-23
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
 Frame = +3

Query: 1005 SGLAKELPDLQVLSLVLFTIQVLPIPANMTEFSHLKELKLVLILSS----DFDLLSVASI 1172
            +G     P L+ L+L  +  +   +P    +F+ L++L+L L+ +     + D+L  A +
Sbjct: 286  TGFPSTSPRLETLTLYCYEHERTLVPEGPFKFTCLRDLRLDLVFAGKGTRNVDVLDYAYL 345

Query: 1173 LNASPCLLKFHLSL----RHGSGSFRGPRVKMYYSKKLYYQLKEVEISGFCDRCDALELA 1340
            L  +P + K  L +     H         +++    + +  LK V ISGF    D +ELA
Sbjct: 346  LEIAPFMEKMELRMWIRWHHQPYCKEDGELRIGLPHQ-HAHLKYVRISGFFGHKDQVELA 404

Query: 1341 IYLLNSAIGLERMILEFQKRCRSIDEELEMKKKQVHRV 1454
            +++L S + LE+M++  +    +   +L + + + H V
Sbjct: 405  LHILGSCMVLEKMVITPKLEISTSHFQLSVSEYKQHYV 442


Top