BLASTX nr result

ID: Coptis25_contig00010733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010733
         (2002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274417.2| PREDICTED: BTB/POZ domain-containing protein...   505   e-140
ref|XP_003602605.1| PRLI-interacting factor G [Medicago truncatu...   500   e-139
ref|XP_002328324.1| predicted protein [Populus trichocarpa] gi|2...   488   e-135
ref|XP_002526636.1| transcription regulator, putative [Ricinus c...   481   e-133
ref|XP_002310504.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131

>ref|XP_002274417.2| PREDICTED: BTB/POZ domain-containing protein At2g13690-like [Vitis
            vinifera]
          Length = 551

 Score =  505 bits (1300), Expect = e-140
 Identities = 259/403 (64%), Positives = 312/403 (77%), Gaps = 1/403 (0%)
 Frame = -3

Query: 1499 NEVGSGSNGV-VYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKKNGVGVSR 1323
            N V  G NG  V+DVRL+LKGK GG LVLEL+S VLSANSSVFA+L+ D RK      ++
Sbjct: 138  NVVKEGENGAGVFDVRLNLKGKHGGSLVLELNSEVLSANSSVFADLISDYRKGCSGPAAK 197

Query: 1322 FCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMFTKGVLSCLK 1143
             CRIEVPEVE+L VFRETIELMFE+D+T+R+ K GV R ID+LEV+AGIMFTKGVLSCLK
Sbjct: 198  LCRIEVPEVEHLGVFRETIELMFEEDITKRLLKAGVYRSIDILEVSAGIMFTKGVLSCLK 257

Query: 1142 YLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQLVRSVTGGT 963
            YLEAVPWSE EE+KLRS+            D+LARL   +  +SQ +LA QLV S+T   
Sbjct: 258  YLEAVPWSEEEEEKLRSVFERFKFDGATTKDILARLYPLDSGDSQGNLARQLVWSITTCV 317

Query: 962  ATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQEASDSIPEER 783
             TN+R+ELK LVK L  KSSVYEK  + +NKEDLY  CQSCL SLV LF+EA++    ER
Sbjct: 318  DTNARNELKLLVKGLLCKSSVYEKDRSDINKEDLYGVCQSCLGSLVTLFEEATNC--SER 375

Query: 782  STSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMHEKASPMVRY 603
                   KPLIE+IS Q D+INWLL+I++++Q+AEEFV++WA Q ELLRMHE  SPMVRY
Sbjct: 376  LAKKEMDKPLIERISRQVDNINWLLDILVDRQIAEEFVEMWASQAELLRMHENTSPMVRY 435

Query: 602  ELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLDLKVLEEAMG 423
            ELSR++A +F+A+G  K+HCR+  R    Q WF PM++DFGWLQRC+KGLD+K LEEAMG
Sbjct: 436  ELSRVSAILFIAVGTRKMHCRTEARLGLLQAWFGPMVLDFGWLQRCKKGLDMKALEEAMG 495

Query: 422  QALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS 294
            QALLTLP+K+Q+ LFMEWF CFS+ GTECPNLSKAFQIWWRRS
Sbjct: 496  QALLTLPLKHQYMLFMEWFRCFSKHGTECPNLSKAFQIWWRRS 538



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
 Frame = -2

Query: 1845 RHRPWCCSFGIPPKSPENIN-----HXXXXXXXXXXXXSFANSPRN--TALNRVSRIDPR 1687
            R R WCCSF +PP SPE++                   SF NSP++  + L  V RIDPR
Sbjct: 18   RRRSWCCSFSVPPTSPEHLRVSQPKPLQKFETLSKSGNSFPNSPQSARSGLGLVGRIDPR 77

Query: 1686 RMLSPGRVSPIDPD 1645
            R+LSPGRVSPID D
Sbjct: 78   RILSPGRVSPIDSD 91


>ref|XP_003602605.1| PRLI-interacting factor G [Medicago truncatula]
            gi|355491653|gb|AES72856.1| PRLI-interacting factor G
            [Medicago truncatula]
          Length = 537

 Score =  500 bits (1288), Expect = e-139
 Identities = 259/421 (61%), Positives = 318/421 (75%), Gaps = 5/421 (1%)
 Frame = -3

Query: 1505 MRNEVGSGSNGVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKKN----G 1338
            M + VG  S G  +DVR+SL+GK+GG +VLEL+S++L ANS VFA L+ D RK N    G
Sbjct: 118  MNSAVGV-SVGDGFDVRMSLRGKNGGSIVLELNSAILCANSEVFAGLIADYRKGNSSSGG 176

Query: 1337 VGVSRFCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMFTKGV 1158
             GV++ CRIEVPEV+NL VFRETIELMFEDDV +R+  +GV R IDVLEV+AGIMFTKGV
Sbjct: 177  TGVNKMCRIEVPEVDNLGVFRETIELMFEDDVAKRLLNIGVYRSIDVLEVSAGIMFTKGV 236

Query: 1157 LSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQLVRS 978
            LSCL+YLEAVPW+E EE+KLR+L            D+L RL L    +SQ ++   LV S
Sbjct: 237  LSCLQYLEAVPWTEEEEEKLRNLFTRFKFDDETTRDILGRLYLHNPEDSQPNVTRHLVWS 296

Query: 977  VTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQEASDS 798
            +T     N+R+ELK LVK L  KSSVYEK+   L+K+DLY  C SC+DSL+ LF+EASDS
Sbjct: 297  ITTCVNANARNELKSLVKGLLCKSSVYEKNHLDLSKDDLYSVCHSCIDSLISLFEEASDS 356

Query: 797  IPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMHEKAS 618
            +  ER T  +T KP+IE IS Q D+INWLLEIML+ Q+AE+FVD+W+DQ +LL+MH  AS
Sbjct: 357  VNPERLTKKDTNKPMIEHISRQVDNINWLLEIMLDGQIAEDFVDIWSDQHQLLKMHNNAS 416

Query: 617  PMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLDLKVL 438
            PMVRYELSR++A +FVA+   KL CR   R    Q WF+PML+DFGWLQRCRKGLD+KVL
Sbjct: 417  PMVRYELSRVSAVLFVAMATRKLQCRLEARSGLLQAWFSPMLLDFGWLQRCRKGLDIKVL 476

Query: 437  EEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS-SKCSGTLSLDS 261
            +EAMGQ LLTLP+K QH LFMEWF  FSR GTECPNLSKAFQIWWRRS  + S T +++S
Sbjct: 477  QEAMGQTLLTLPLKQQHTLFMEWFHHFSRHGTECPNLSKAFQIWWRRSFLRGSETYAIES 536

Query: 260  Q 258
            +
Sbjct: 537  R 537



 Score = 67.8 bits (164), Expect = 1e-08
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -2

Query: 1845 RHRPWCCSFGIPPKSPENINHXXXXXXXXXXXXSFA----NSPRNT-ALNRVSRIDPRRM 1681
            RHR WCCSF +PP SP+N               +F+    NSP+++ +  R++RIDPRR+
Sbjct: 12   RHRTWCCSFAVPPSSPDNPPIKPRKPEPISKPTTFSSSIPNSPQSSKSTTRIARIDPRRI 71

Query: 1680 LSPGRVSPIDPDT 1642
            LSPGRVSPI+  T
Sbjct: 72   LSPGRVSPIEDST 84


>ref|XP_002328324.1| predicted protein [Populus trichocarpa] gi|222838039|gb|EEE76404.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  488 bits (1257), Expect = e-135
 Identities = 253/412 (61%), Positives = 305/412 (74%), Gaps = 10/412 (2%)
 Frame = -3

Query: 1499 NEVGSGSNGVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKK-------- 1344
            ++ GS S   V+DVRL+L+G++GG LVLEL+S VL ANS VFA  + + RKK        
Sbjct: 130  SDTGSDSGRGVFDVRLNLRGRNGGGLVLELNSEVLIANSEVFAGSICEYRKKLGSKCNSN 189

Query: 1343 -NGVGVSR-FCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMF 1170
             +G  +SR  CRIEVP+VENL VFR+TIELMFE+D+ +R+ K+G  R I +LEV+AGIMF
Sbjct: 190  EDGGNLSRKICRIEVPDVENLGVFRDTIELMFEEDIAKRLLKIGAYRAIGILEVSAGIMF 249

Query: 1169 TKGVLSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQ 990
            TKGVLSCLKYLEAVPW+E EEDKLR+L            D+LARL L    +SQQ+LA Q
Sbjct: 250  TKGVLSCLKYLEAVPWTEEEEDKLRNLFTVFKFDETTTRDILARLHLLSSEDSQQNLARQ 309

Query: 989  LVRSVTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQE 810
            LV S+T     N+R+ELK LVK L  KSSVYEK    L KEDLY  C SCL S+V L +E
Sbjct: 310  LVWSITTCADANARNELKSLVKGLLCKSSVYEKDQHDLTKEDLYDVCHSCLGSIVSLMEE 369

Query: 809  ASDSIPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMH 630
            ASD IP+       T+KPLI +IS Q D+I WLLEI+L++Q+ EEFV +WADQV+LL+MH
Sbjct: 370  ASDIIPQGTVVKKETSKPLIGRISRQVDNIIWLLEILLDRQIGEEFVGMWADQVDLLKMH 429

Query: 629  EKASPMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLD 450
            E  SPMVRYELSR++A +F+A+G  KLHCRS  R    Q WF PML+DFGWLQRC+KGLD
Sbjct: 430  ESTSPMVRYELSRVSAILFIAMGTRKLHCRSEARAALLQAWFGPMLLDFGWLQRCKKGLD 489

Query: 449  LKVLEEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS 294
            +K LEEAMGQ LLTLPMK Q+ LF EWFG FS+ GTECPNLSKAFQIWWRRS
Sbjct: 490  MKALEEAMGQTLLTLPMKQQYMLFTEWFGYFSKHGTECPNLSKAFQIWWRRS 541



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 36/76 (47%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
 Frame = -2

Query: 1845 RHRPWCCSFGIPPKSPENI---------NHXXXXXXXXXXXXSFANSPRNTALNRVSRID 1693
            R   WCCSF + P SPEN          N             S  NSP+   LN V RID
Sbjct: 18   RRSSWCCSFAVQPSSPENRPFTKPAFRKNRKPDSSVSKPGPYSVPNSPK-PGLNFVGRID 76

Query: 1692 PRRMLSPGRVSPIDPD 1645
            PRR+LSPGRVSPID D
Sbjct: 77   PRRILSPGRVSPIDSD 92


>ref|XP_002526636.1| transcription regulator, putative [Ricinus communis]
            gi|223534028|gb|EEF35748.1| transcription regulator,
            putative [Ricinus communis]
          Length = 560

 Score =  481 bits (1239), Expect = e-133
 Identities = 249/422 (59%), Positives = 302/422 (71%), Gaps = 20/422 (4%)
 Frame = -3

Query: 1499 NEVGSGSN--GVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKKNGVGVS 1326
            + +GSGS   G V DVRL+LKGK GG LVLE  S VL ANS VF  L+ + R  NG+G  
Sbjct: 128  SHLGSGSEPCGGVCDVRLNLKGKRGGGLVLETSSEVLIANSEVFCGLISEYR--NGLGSK 185

Query: 1325 ------------------RFCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCID 1200
                              + CRIEVP++ENL VFR+TIELMFE+D+T+R+ K+GV R ID
Sbjct: 186  SNSNNNNNSSSTSCKDSLKMCRIEVPDLENLGVFRDTIELMFEEDITKRLLKIGVYRAID 245

Query: 1199 VLEVAAGIMFTKGVLSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQ 1020
            +LEV+ GI F KGVLSCLK+LEAVPW+E EE+KLR L            D+LARL L   
Sbjct: 246  ILEVSVGIKFNKGVLSCLKFLEAVPWTEEEEEKLRGLFAVFKFEEAASQDILARLCLNSS 305

Query: 1019 INSQQHLALQLVRSVTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSC 840
             +S+Q+LA QLV S+T  T TN+R+ELK LVK L  KSS+YEK    L+K DLY+ CQSC
Sbjct: 306  ADSKQNLARQLVWSITTCTDTNARNELKSLVKGLLCKSSIYEKDQPELDKRDLYVVCQSC 365

Query: 839  LDSLVVLFQEASDSIPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVW 660
            L SL+ L +E   + P  R     T KPLIE+IS Q D+INWLLEI++++QM EEFVD+W
Sbjct: 366  LGSLLTLLEEGCYTSPNGRVAKRETGKPLIERISRQVDNINWLLEILIDRQMGEEFVDMW 425

Query: 659  ADQVELLRMHEKASPMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFG 480
            ADQ ELL++HE ASPMVRYELSR++A +F+A+G  KLHCR+  R    Q WF PML DFG
Sbjct: 426  ADQGELLKLHESASPMVRYELSRVSATLFIAMGARKLHCRAEARAGLLQAWFDPMLSDFG 485

Query: 479  WLQRCRKGLDLKVLEEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWR 300
            WLQRC+KGLD K LEEA+GQ LLTLP+K Q+ LFMEWF CFS+ GTECPNLSKAFQIWWR
Sbjct: 486  WLQRCKKGLDTKALEEALGQTLLTLPLKQQYMLFMEWFRCFSKHGTECPNLSKAFQIWWR 545

Query: 299  RS 294
            RS
Sbjct: 546  RS 547



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 38/79 (48%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
 Frame = -2

Query: 1857 SVTSRHRPWCCSFGIPPKSPEN------INHXXXXXXXXXXXXSFANSPRNT--ALNRVS 1702
            S  +R   WCCS    P SPEN        H            S  NSP NT   LN V 
Sbjct: 10   SSQARKLSWCCSLTGYPPSPENPVILAKAIHKKTDSVYKLSSNSVPNSPLNTKSGLNFVG 69

Query: 1701 RIDPRRMLSPGRVSPIDPD 1645
            RIDPRR+LSPGRVSPID D
Sbjct: 70   RIDPRRILSPGRVSPIDSD 88


>ref|XP_002310504.1| predicted protein [Populus trichocarpa] gi|222853407|gb|EEE90954.1|
            predicted protein [Populus trichocarpa]
          Length = 546

 Score =  474 bits (1221), Expect = e-131
 Identities = 248/408 (60%), Positives = 294/408 (72%), Gaps = 9/408 (2%)
 Frame = -3

Query: 1490 GSGSNGVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKK--------NGV 1335
            G  S   V+DVRL L+GK+GG LVLEL+S VL ANS VFA L+ + RK          G 
Sbjct: 126  GLDSGRGVFDVRLKLRGKNGGGLVLELNSEVLIANSEVFAGLICEYRKNLGSKCDGDGGG 185

Query: 1334 GVSR-FCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMFTKGV 1158
             +SR  CRIEVP+VENL +FRETIELMFE+D+ +R+ K+G  R ID+LEV+AGIMFTKGV
Sbjct: 186  NLSRKMCRIEVPDVENLGIFRETIELMFEEDIAKRLLKVGAYRAIDILEVSAGIMFTKGV 245

Query: 1157 LSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQLVRS 978
            LSCLKYLEA+PW+E EED+LR+L            D+LARL L    +S+Q+LA QLV S
Sbjct: 246  LSCLKYLEAIPWTEEEEDRLRNLFAVFKFDETTTQDILARLHLLSSEDSKQNLARQLVWS 305

Query: 977  VTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQEASDS 798
            +T     N+R+ELK LVK L  KSSVYEK     NKEDLY  CQSCL SLV L +EAS  
Sbjct: 306  ITACADANARNELKSLVKGLLCKSSVYEKDQHDPNKEDLYDVCQSCLGSLVNLMEEASGI 365

Query: 797  IPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMHEKAS 618
            I   +     T+KPLI +IS Q D+INWLLEI+ +QQ+ EEFVD+WA Q ELL MH   S
Sbjct: 366  ISPGKVVKKETSKPLIGRISRQVDNINWLLEILFDQQIGEEFVDMWAHQGELLSMHGSVS 425

Query: 617  PMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLDLKVL 438
            PMVRYELSR++A +F+A+G  KLHCRS  R    Q WF PML+DFGWLQRC+KGLD+K L
Sbjct: 426  PMVRYELSRVSAILFIAMGTRKLHCRSEARAALLQAWFGPMLLDFGWLQRCKKGLDMKAL 485

Query: 437  EEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS 294
            EEAMGQ LLTLP+K Q  LF EWF  FS+ GTECPNL KAFQIWWRRS
Sbjct: 486  EEAMGQTLLTLPLKQQDVLFTEWFRYFSKHGTECPNLCKAFQIWWRRS 533



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 33/63 (52%), Positives = 37/63 (58%)
 Frame = -2

Query: 1833 WCCSFGIPPKSPENINHXXXXXXXXXXXXSFANSPRNTALNRVSRIDPRRMLSPGRVSPI 1654
            WCCSF +PP   +N               SF NSP+   LN V RIDPRR+LSPGRVSPI
Sbjct: 22   WCCSFAVPPSFQKN--KKPDYSVSKLGPRSFPNSPK-PGLNFVGRIDPRRILSPGRVSPI 78

Query: 1653 DPD 1645
            D D
Sbjct: 79   DSD 81


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