BLASTX nr result
ID: Coptis25_contig00010733
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010733
(2002 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274417.2| PREDICTED: BTB/POZ domain-containing protein... 505 e-140
ref|XP_003602605.1| PRLI-interacting factor G [Medicago truncatu... 500 e-139
ref|XP_002328324.1| predicted protein [Populus trichocarpa] gi|2... 488 e-135
ref|XP_002526636.1| transcription regulator, putative [Ricinus c... 481 e-133
ref|XP_002310504.1| predicted protein [Populus trichocarpa] gi|2... 474 e-131
>ref|XP_002274417.2| PREDICTED: BTB/POZ domain-containing protein At2g13690-like [Vitis
vinifera]
Length = 551
Score = 505 bits (1300), Expect = e-140
Identities = 259/403 (64%), Positives = 312/403 (77%), Gaps = 1/403 (0%)
Frame = -3
Query: 1499 NEVGSGSNGV-VYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKKNGVGVSR 1323
N V G NG V+DVRL+LKGK GG LVLEL+S VLSANSSVFA+L+ D RK ++
Sbjct: 138 NVVKEGENGAGVFDVRLNLKGKHGGSLVLELNSEVLSANSSVFADLISDYRKGCSGPAAK 197
Query: 1322 FCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMFTKGVLSCLK 1143
CRIEVPEVE+L VFRETIELMFE+D+T+R+ K GV R ID+LEV+AGIMFTKGVLSCLK
Sbjct: 198 LCRIEVPEVEHLGVFRETIELMFEEDITKRLLKAGVYRSIDILEVSAGIMFTKGVLSCLK 257
Query: 1142 YLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQLVRSVTGGT 963
YLEAVPWSE EE+KLRS+ D+LARL + +SQ +LA QLV S+T
Sbjct: 258 YLEAVPWSEEEEEKLRSVFERFKFDGATTKDILARLYPLDSGDSQGNLARQLVWSITTCV 317
Query: 962 ATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQEASDSIPEER 783
TN+R+ELK LVK L KSSVYEK + +NKEDLY CQSCL SLV LF+EA++ ER
Sbjct: 318 DTNARNELKLLVKGLLCKSSVYEKDRSDINKEDLYGVCQSCLGSLVTLFEEATNC--SER 375
Query: 782 STSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMHEKASPMVRY 603
KPLIE+IS Q D+INWLL+I++++Q+AEEFV++WA Q ELLRMHE SPMVRY
Sbjct: 376 LAKKEMDKPLIERISRQVDNINWLLDILVDRQIAEEFVEMWASQAELLRMHENTSPMVRY 435
Query: 602 ELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLDLKVLEEAMG 423
ELSR++A +F+A+G K+HCR+ R Q WF PM++DFGWLQRC+KGLD+K LEEAMG
Sbjct: 436 ELSRVSAILFIAVGTRKMHCRTEARLGLLQAWFGPMVLDFGWLQRCKKGLDMKALEEAMG 495
Query: 422 QALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS 294
QALLTLP+K+Q+ LFMEWF CFS+ GTECPNLSKAFQIWWRRS
Sbjct: 496 QALLTLPLKHQYMLFMEWFRCFSKHGTECPNLSKAFQIWWRRS 538
Score = 65.9 bits (159), Expect = 4e-08
Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Frame = -2
Query: 1845 RHRPWCCSFGIPPKSPENIN-----HXXXXXXXXXXXXSFANSPRN--TALNRVSRIDPR 1687
R R WCCSF +PP SPE++ SF NSP++ + L V RIDPR
Sbjct: 18 RRRSWCCSFSVPPTSPEHLRVSQPKPLQKFETLSKSGNSFPNSPQSARSGLGLVGRIDPR 77
Query: 1686 RMLSPGRVSPIDPD 1645
R+LSPGRVSPID D
Sbjct: 78 RILSPGRVSPIDSD 91
>ref|XP_003602605.1| PRLI-interacting factor G [Medicago truncatula]
gi|355491653|gb|AES72856.1| PRLI-interacting factor G
[Medicago truncatula]
Length = 537
Score = 500 bits (1288), Expect = e-139
Identities = 259/421 (61%), Positives = 318/421 (75%), Gaps = 5/421 (1%)
Frame = -3
Query: 1505 MRNEVGSGSNGVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKKN----G 1338
M + VG S G +DVR+SL+GK+GG +VLEL+S++L ANS VFA L+ D RK N G
Sbjct: 118 MNSAVGV-SVGDGFDVRMSLRGKNGGSIVLELNSAILCANSEVFAGLIADYRKGNSSSGG 176
Query: 1337 VGVSRFCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMFTKGV 1158
GV++ CRIEVPEV+NL VFRETIELMFEDDV +R+ +GV R IDVLEV+AGIMFTKGV
Sbjct: 177 TGVNKMCRIEVPEVDNLGVFRETIELMFEDDVAKRLLNIGVYRSIDVLEVSAGIMFTKGV 236
Query: 1157 LSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQLVRS 978
LSCL+YLEAVPW+E EE+KLR+L D+L RL L +SQ ++ LV S
Sbjct: 237 LSCLQYLEAVPWTEEEEEKLRNLFTRFKFDDETTRDILGRLYLHNPEDSQPNVTRHLVWS 296
Query: 977 VTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQEASDS 798
+T N+R+ELK LVK L KSSVYEK+ L+K+DLY C SC+DSL+ LF+EASDS
Sbjct: 297 ITTCVNANARNELKSLVKGLLCKSSVYEKNHLDLSKDDLYSVCHSCIDSLISLFEEASDS 356
Query: 797 IPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMHEKAS 618
+ ER T +T KP+IE IS Q D+INWLLEIML+ Q+AE+FVD+W+DQ +LL+MH AS
Sbjct: 357 VNPERLTKKDTNKPMIEHISRQVDNINWLLEIMLDGQIAEDFVDIWSDQHQLLKMHNNAS 416
Query: 617 PMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLDLKVL 438
PMVRYELSR++A +FVA+ KL CR R Q WF+PML+DFGWLQRCRKGLD+KVL
Sbjct: 417 PMVRYELSRVSAVLFVAMATRKLQCRLEARSGLLQAWFSPMLLDFGWLQRCRKGLDIKVL 476
Query: 437 EEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS-SKCSGTLSLDS 261
+EAMGQ LLTLP+K QH LFMEWF FSR GTECPNLSKAFQIWWRRS + S T +++S
Sbjct: 477 QEAMGQTLLTLPLKQQHTLFMEWFHHFSRHGTECPNLSKAFQIWWRRSFLRGSETYAIES 536
Query: 260 Q 258
+
Sbjct: 537 R 537
Score = 67.8 bits (164), Expect = 1e-08
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Frame = -2
Query: 1845 RHRPWCCSFGIPPKSPENINHXXXXXXXXXXXXSFA----NSPRNT-ALNRVSRIDPRRM 1681
RHR WCCSF +PP SP+N +F+ NSP+++ + R++RIDPRR+
Sbjct: 12 RHRTWCCSFAVPPSSPDNPPIKPRKPEPISKPTTFSSSIPNSPQSSKSTTRIARIDPRRI 71
Query: 1680 LSPGRVSPIDPDT 1642
LSPGRVSPI+ T
Sbjct: 72 LSPGRVSPIEDST 84
>ref|XP_002328324.1| predicted protein [Populus trichocarpa] gi|222838039|gb|EEE76404.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 488 bits (1257), Expect = e-135
Identities = 253/412 (61%), Positives = 305/412 (74%), Gaps = 10/412 (2%)
Frame = -3
Query: 1499 NEVGSGSNGVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKK-------- 1344
++ GS S V+DVRL+L+G++GG LVLEL+S VL ANS VFA + + RKK
Sbjct: 130 SDTGSDSGRGVFDVRLNLRGRNGGGLVLELNSEVLIANSEVFAGSICEYRKKLGSKCNSN 189
Query: 1343 -NGVGVSR-FCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMF 1170
+G +SR CRIEVP+VENL VFR+TIELMFE+D+ +R+ K+G R I +LEV+AGIMF
Sbjct: 190 EDGGNLSRKICRIEVPDVENLGVFRDTIELMFEEDIAKRLLKIGAYRAIGILEVSAGIMF 249
Query: 1169 TKGVLSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQ 990
TKGVLSCLKYLEAVPW+E EEDKLR+L D+LARL L +SQQ+LA Q
Sbjct: 250 TKGVLSCLKYLEAVPWTEEEEDKLRNLFTVFKFDETTTRDILARLHLLSSEDSQQNLARQ 309
Query: 989 LVRSVTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQE 810
LV S+T N+R+ELK LVK L KSSVYEK L KEDLY C SCL S+V L +E
Sbjct: 310 LVWSITTCADANARNELKSLVKGLLCKSSVYEKDQHDLTKEDLYDVCHSCLGSIVSLMEE 369
Query: 809 ASDSIPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMH 630
ASD IP+ T+KPLI +IS Q D+I WLLEI+L++Q+ EEFV +WADQV+LL+MH
Sbjct: 370 ASDIIPQGTVVKKETSKPLIGRISRQVDNIIWLLEILLDRQIGEEFVGMWADQVDLLKMH 429
Query: 629 EKASPMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLD 450
E SPMVRYELSR++A +F+A+G KLHCRS R Q WF PML+DFGWLQRC+KGLD
Sbjct: 430 ESTSPMVRYELSRVSAILFIAMGTRKLHCRSEARAALLQAWFGPMLLDFGWLQRCKKGLD 489
Query: 449 LKVLEEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS 294
+K LEEAMGQ LLTLPMK Q+ LF EWFG FS+ GTECPNLSKAFQIWWRRS
Sbjct: 490 MKALEEAMGQTLLTLPMKQQYMLFTEWFGYFSKHGTECPNLSKAFQIWWRRS 541
Score = 61.2 bits (147), Expect = 1e-06
Identities = 36/76 (47%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = -2
Query: 1845 RHRPWCCSFGIPPKSPENI---------NHXXXXXXXXXXXXSFANSPRNTALNRVSRID 1693
R WCCSF + P SPEN N S NSP+ LN V RID
Sbjct: 18 RRSSWCCSFAVQPSSPENRPFTKPAFRKNRKPDSSVSKPGPYSVPNSPK-PGLNFVGRID 76
Query: 1692 PRRMLSPGRVSPIDPD 1645
PRR+LSPGRVSPID D
Sbjct: 77 PRRILSPGRVSPIDSD 92
>ref|XP_002526636.1| transcription regulator, putative [Ricinus communis]
gi|223534028|gb|EEF35748.1| transcription regulator,
putative [Ricinus communis]
Length = 560
Score = 481 bits (1239), Expect = e-133
Identities = 249/422 (59%), Positives = 302/422 (71%), Gaps = 20/422 (4%)
Frame = -3
Query: 1499 NEVGSGSN--GVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKKNGVGVS 1326
+ +GSGS G V DVRL+LKGK GG LVLE S VL ANS VF L+ + R NG+G
Sbjct: 128 SHLGSGSEPCGGVCDVRLNLKGKRGGGLVLETSSEVLIANSEVFCGLISEYR--NGLGSK 185
Query: 1325 ------------------RFCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCID 1200
+ CRIEVP++ENL VFR+TIELMFE+D+T+R+ K+GV R ID
Sbjct: 186 SNSNNNNNSSSTSCKDSLKMCRIEVPDLENLGVFRDTIELMFEEDITKRLLKIGVYRAID 245
Query: 1199 VLEVAAGIMFTKGVLSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQ 1020
+LEV+ GI F KGVLSCLK+LEAVPW+E EE+KLR L D+LARL L
Sbjct: 246 ILEVSVGIKFNKGVLSCLKFLEAVPWTEEEEEKLRGLFAVFKFEEAASQDILARLCLNSS 305
Query: 1019 INSQQHLALQLVRSVTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSC 840
+S+Q+LA QLV S+T T TN+R+ELK LVK L KSS+YEK L+K DLY+ CQSC
Sbjct: 306 ADSKQNLARQLVWSITTCTDTNARNELKSLVKGLLCKSSIYEKDQPELDKRDLYVVCQSC 365
Query: 839 LDSLVVLFQEASDSIPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVW 660
L SL+ L +E + P R T KPLIE+IS Q D+INWLLEI++++QM EEFVD+W
Sbjct: 366 LGSLLTLLEEGCYTSPNGRVAKRETGKPLIERISRQVDNINWLLEILIDRQMGEEFVDMW 425
Query: 659 ADQVELLRMHEKASPMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFG 480
ADQ ELL++HE ASPMVRYELSR++A +F+A+G KLHCR+ R Q WF PML DFG
Sbjct: 426 ADQGELLKLHESASPMVRYELSRVSATLFIAMGARKLHCRAEARAGLLQAWFDPMLSDFG 485
Query: 479 WLQRCRKGLDLKVLEEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWR 300
WLQRC+KGLD K LEEA+GQ LLTLP+K Q+ LFMEWF CFS+ GTECPNLSKAFQIWWR
Sbjct: 486 WLQRCKKGLDTKALEEALGQTLLTLPLKQQYMLFMEWFRCFSKHGTECPNLSKAFQIWWR 545
Query: 299 RS 294
RS
Sbjct: 546 RS 547
Score = 58.5 bits (140), Expect = 6e-06
Identities = 38/79 (48%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = -2
Query: 1857 SVTSRHRPWCCSFGIPPKSPEN------INHXXXXXXXXXXXXSFANSPRNT--ALNRVS 1702
S +R WCCS P SPEN H S NSP NT LN V
Sbjct: 10 SSQARKLSWCCSLTGYPPSPENPVILAKAIHKKTDSVYKLSSNSVPNSPLNTKSGLNFVG 69
Query: 1701 RIDPRRMLSPGRVSPIDPD 1645
RIDPRR+LSPGRVSPID D
Sbjct: 70 RIDPRRILSPGRVSPIDSD 88
>ref|XP_002310504.1| predicted protein [Populus trichocarpa] gi|222853407|gb|EEE90954.1|
predicted protein [Populus trichocarpa]
Length = 546
Score = 474 bits (1221), Expect = e-131
Identities = 248/408 (60%), Positives = 294/408 (72%), Gaps = 9/408 (2%)
Frame = -3
Query: 1490 GSGSNGVVYDVRLSLKGKSGGCLVLELDSSVLSANSSVFANLVLDCRKK--------NGV 1335
G S V+DVRL L+GK+GG LVLEL+S VL ANS VFA L+ + RK G
Sbjct: 126 GLDSGRGVFDVRLKLRGKNGGGLVLELNSEVLIANSEVFAGLICEYRKNLGSKCDGDGGG 185
Query: 1334 GVSR-FCRIEVPEVENLSVFRETIELMFEDDVTRRVRKMGVSRCIDVLEVAAGIMFTKGV 1158
+SR CRIEVP+VENL +FRETIELMFE+D+ +R+ K+G R ID+LEV+AGIMFTKGV
Sbjct: 186 NLSRKMCRIEVPDVENLGIFRETIELMFEEDIAKRLLKVGAYRAIDILEVSAGIMFTKGV 245
Query: 1157 LSCLKYLEAVPWSESEEDKLRSLXXXXXXXXXXXXDVLARLSLPEQINSQQHLALQLVRS 978
LSCLKYLEA+PW+E EED+LR+L D+LARL L +S+Q+LA QLV S
Sbjct: 246 LSCLKYLEAIPWTEEEEDRLRNLFAVFKFDETTTQDILARLHLLSSEDSKQNLARQLVWS 305
Query: 977 VTGGTATNSRSELKCLVKDLFAKSSVYEKSLTGLNKEDLYLTCQSCLDSLVVLFQEASDS 798
+T N+R+ELK LVK L KSSVYEK NKEDLY CQSCL SLV L +EAS
Sbjct: 306 ITACADANARNELKSLVKGLLCKSSVYEKDQHDPNKEDLYDVCQSCLGSLVNLMEEASGI 365
Query: 797 IPEERSTSVNTAKPLIEQISTQADSINWLLEIMLEQQMAEEFVDVWADQVELLRMHEKAS 618
I + T+KPLI +IS Q D+INWLLEI+ +QQ+ EEFVD+WA Q ELL MH S
Sbjct: 366 ISPGKVVKKETSKPLIGRISRQVDNINWLLEILFDQQIGEEFVDMWAHQGELLSMHGSVS 425
Query: 617 PMVRYELSRITAWVFVALGRGKLHCRSVTRCRFFQVWFTPMLVDFGWLQRCRKGLDLKVL 438
PMVRYELSR++A +F+A+G KLHCRS R Q WF PML+DFGWLQRC+KGLD+K L
Sbjct: 426 PMVRYELSRVSAILFIAMGTRKLHCRSEARAALLQAWFGPMLLDFGWLQRCKKGLDMKAL 485
Query: 437 EEAMGQALLTLPMKNQHALFMEWFGCFSRQGTECPNLSKAFQIWWRRS 294
EEAMGQ LLTLP+K Q LF EWF FS+ GTECPNL KAFQIWWRRS
Sbjct: 486 EEAMGQTLLTLPLKQQDVLFTEWFRYFSKHGTECPNLCKAFQIWWRRS 533
Score = 60.1 bits (144), Expect = 2e-06
Identities = 33/63 (52%), Positives = 37/63 (58%)
Frame = -2
Query: 1833 WCCSFGIPPKSPENINHXXXXXXXXXXXXSFANSPRNTALNRVSRIDPRRMLSPGRVSPI 1654
WCCSF +PP +N SF NSP+ LN V RIDPRR+LSPGRVSPI
Sbjct: 22 WCCSFAVPPSFQKN--KKPDYSVSKLGPRSFPNSPK-PGLNFVGRIDPRRILSPGRVSPI 78
Query: 1653 DPD 1645
D D
Sbjct: 79 DSD 81