BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010727
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   556   e-156
ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit al...   548   e-153
ref|XP_002514509.1| Succinyl-CoA ligase [GDP-forming] subunit al...   544   e-152
gb|ABK95068.1| unknown [Populus trichocarpa]                          544   e-152
ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|2...   542   e-152

>ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
           mitochondrial-like [Cucumis sativus]
          Length = 342

 Score =  556 bits (1432), Expect = e-156
 Identities = 281/327 (85%), Positives = 289/327 (88%)
 Frame = +1

Query: 19  KKMSRQATKLIGFLRTANQSRHYTXXXXXXXXVFVDHNTRVICQGITGKNGTFHTEQAIE 198
           +K S  ++    F R A+Q RHY+        VFVD NTRVICQGITGKNGTFHTEQAIE
Sbjct: 16  RKTSSSSSSSSVFSRAASQIRHYSAAPSPPPAVFVDKNTRVICQGITGKNGTFHTEQAIE 75

Query: 199 YGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXXXXXL 378
           YGT MVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPP F            L
Sbjct: 76  YGTKMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAEL 135

Query: 379 DLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVG 558
           DLVVCITEGIPQHDMVRVKAAL KQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGR+G
Sbjct: 136 DLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIG 195

Query: 559 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIVLIGE 738
           IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFL DPQTEGIVLIGE
Sbjct: 196 IVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIVLIGE 255

Query: 739 IGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRE 918
           IGGTAEEDAAALIKESGTDKPIV FIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRE
Sbjct: 256 IGGTAEEDAAALIKESGTDKPIVGFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLRE 315

Query: 919 AGVTVVESPAKIGVAMLESFKQRGLVS 999
           AGVTVVESPAKIGV+MLE FKQRGLVS
Sbjct: 316 AGVTVVESPAKIGVSMLEVFKQRGLVS 342


>ref|XP_002514510.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial
            precursor, putative [Ricinus communis]
            gi|223546409|gb|EEF47910.1| Succinyl-CoA ligase
            [GDP-forming] subunit alpha-2, mitochondrial precursor,
            putative [Ricinus communis]
          Length = 334

 Score =  548 bits (1411), Expect = e-153
 Identities = 281/334 (84%), Positives = 292/334 (87%), Gaps = 9/334 (2%)
 Frame = +1

Query: 25   MSRQAT-KLIGFLRT--------ANQSRHYTXXXXXXXXVFVDHNTRVICQGITGKNGTF 177
            M+RQA  KLIG + +        A Q+R Y         VFVD NTRVICQGITGKNGTF
Sbjct: 1    MARQAVAKLIGSIASRKPSLSSSAIQTRQYAAAASPPAAVFVDKNTRVICQGITGKNGTF 60

Query: 178  HTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXX 357
            HTEQAIEYGT MVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP F      
Sbjct: 61   HTEQAIEYGTTMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAIM 120

Query: 358  XXXXXXLDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYI 537
                  LDLVVCITEGIPQHDMVRVKAAL +QSKTRLIGPNCPGIIKPGECKIGIMPGYI
Sbjct: 121  EAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYI 180

Query: 538  HKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTE 717
            HKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFLADPQTE
Sbjct: 181  HKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLADPQTE 240

Query: 718  GIVLIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD 897
            GI+LIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD
Sbjct: 241  GIILIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD 300

Query: 898  KIKTLREAGVTVVESPAKIGVAMLESFKQRGLVS 999
            KIKTL+EAGVTVVESPAKIGVAML+ FKQRGL S
Sbjct: 301  KIKTLKEAGVTVVESPAKIGVAMLDVFKQRGLAS 334


>ref|XP_002514509.1| Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial
            precursor, putative [Ricinus communis]
            gi|223546408|gb|EEF47909.1| Succinyl-CoA ligase
            [GDP-forming] subunit alpha-2, mitochondrial precursor,
            putative [Ricinus communis]
          Length = 334

 Score =  544 bits (1401), Expect = e-152
 Identities = 279/334 (83%), Positives = 291/334 (87%), Gaps = 9/334 (2%)
 Frame = +1

Query: 25   MSRQAT-KLIGFLRT--------ANQSRHYTXXXXXXXXVFVDHNTRVICQGITGKNGTF 177
            M+RQA  KLIG + +        A Q+R Y         VFVD NT +ICQGITGKNGTF
Sbjct: 1    MARQAVAKLIGSIASRKPSLSSSAIQTRQYAAAASPPAAVFVDKNTGLICQGITGKNGTF 60

Query: 178  HTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXX 357
            HTEQAIEYGT MVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP F      
Sbjct: 61   HTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAIM 120

Query: 358  XXXXXXLDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYI 537
                  LDLVVCITEGIPQHDMVRVKAAL +QSKTRLIGPNCPGIIKPGECKIGIMPGYI
Sbjct: 121  EAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYI 180

Query: 538  HKPGRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTE 717
            HKPGR+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFLADPQTE
Sbjct: 181  HKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLADPQTE 240

Query: 718  GIVLIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD 897
            GI+LIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD
Sbjct: 241  GIILIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQD 300

Query: 898  KIKTLREAGVTVVESPAKIGVAMLESFKQRGLVS 999
            KIKTL+EAGVTVVESPAKIGVAML+ FKQRGL S
Sbjct: 301  KIKTLKEAGVTVVESPAKIGVAMLDVFKQRGLAS 334


>gb|ABK95068.1| unknown [Populus trichocarpa]
          Length = 331

 Score =  544 bits (1401), Expect = e-152
 Identities = 275/331 (83%), Positives = 291/331 (87%), Gaps = 6/331 (1%)
 Frame = +1

Query: 25  MSRQATKLIGFLRTA------NQSRHYTXXXXXXXXVFVDHNTRVICQGITGKNGTFHTE 186
           MSRQA +L+  L +       +QSR +T        VFVD NTRVICQGITGKNGTFHTE
Sbjct: 1   MSRQAKRLVSSLSSKISSFSYSQSRSFTAAPPPPPAVFVDKNTRVICQGITGKNGTFHTE 60

Query: 187 QAIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXX 366
           QAIEYGT MVGGVTPKKGGTEHLGLPVFNSV+EAKAETKANASVIYVPP F         
Sbjct: 61  QAIEYGTKMVGGVTPKKGGTEHLGLPVFNSVSEAKAETKANASVIYVPPPFAAAAILEAV 120

Query: 367 XXXLDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKP 546
              LDLVVCITEGIPQHDMVRVKAA+KKQ+KTRLIGPNCPGIIKPGECKIGIMPGYIHKP
Sbjct: 121 EAELDLVVCITEGIPQHDMVRVKAAIKKQTKTRLIGPNCPGIIKPGECKIGIMPGYIHKP 180

Query: 547 GRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIV 726
           GRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFLADPQTEGIV
Sbjct: 181 GRVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVEKFLADPQTEGIV 240

Query: 727 LIGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIK 906
           LIGEIGGTAEEDAA LIKESGT+KP+VAFIAG+TAPPGRRMGHAGAIVSGGKGTAQDKIK
Sbjct: 241 LIGEIGGTAEEDAATLIKESGTEKPVVAFIAGVTAPPGRRMGHAGAIVSGGKGTAQDKIK 300

Query: 907 TLREAGVTVVESPAKIGVAMLESFKQRGLVS 999
           TLR+AGV VVESPAKIG AML+ FK+RGLV+
Sbjct: 301 TLRDAGVIVVESPAKIGTAMLDVFKERGLVN 331


>ref|XP_002329684.1| predicted protein [Populus trichocarpa] gi|222870592|gb|EEF07723.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  542 bits (1396), Expect = e-152
 Identities = 274/330 (83%), Positives = 288/330 (87%), Gaps = 5/330 (1%)
 Frame = +1

Query: 25  MSRQATKLIGFL-----RTANQSRHYTXXXXXXXXVFVDHNTRVICQGITGKNGTFHTEQ 189
           M+RQA   I  L      +A Q+RHY         VFVD NTRVICQGITGKNGTFHTEQ
Sbjct: 1   MARQAPSSINSLLNLSPSSAAQTRHYAAAPPPPPAVFVDKNTRVICQGITGKNGTFHTEQ 60

Query: 190 AIEYGTNMVGGVTPKKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPSFXXXXXXXXXX 369
           AIEYGT MVGGVTPKKGGTEHLGLPVFN+VAEAKAETKANASVIYVPP F          
Sbjct: 61  AIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFAAAAILEAME 120

Query: 370 XXLDLVVCITEGIPQHDMVRVKAALKKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG 549
             L+LVVCITEGIPQHDMVRVKAAL +Q+KTRLIGPNCPGIIKPGECKIGIMP YIHKPG
Sbjct: 121 AELNLVVCITEGIPQHDMVRVKAALNRQTKTRLIGPNCPGIIKPGECKIGIMPAYIHKPG 180

Query: 550 RVGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLTKFLADPQTEGIVL 729
           R+GIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDC+ KFL DPQTEGI+L
Sbjct: 181 RIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQTEGIIL 240

Query: 730 IGEIGGTAEEDAAALIKESGTDKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKT 909
           IGEIGGTAEEDAAALIKESGT+KP+VAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKT
Sbjct: 241 IGEIGGTAEEDAAALIKESGTEKPVVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKT 300

Query: 910 LREAGVTVVESPAKIGVAMLESFKQRGLVS 999
           LREAGVTVVESPAKIGVAML+ FKQRGL +
Sbjct: 301 LREAGVTVVESPAKIGVAMLDVFKQRGLAN 330