BLASTX nr result

ID: Coptis25_contig00010725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010725
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257...   242   1e-61
ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257...   241   2e-61
emb|CBI27058.3| unnamed protein product [Vitis vinifera]              241   2e-61
ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
ref|XP_002893418.1| predicted protein [Arabidopsis lyrata subsp....   221   2e-55

>ref|XP_002281762.2| PREDICTED: uncharacterized protein LOC100257723 isoform 1 [Vitis
           vinifera]
          Length = 369

 Score =  242 bits (618), Expect = 1e-61
 Identities = 144/272 (52%), Positives = 175/272 (64%), Gaps = 14/272 (5%)
 Frame = -2

Query: 775 VINYMETMHTTNK-KSYEEYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXX 599
           +I    TM  ++K +   +Y++ALEEERRKIQVF RELPLCL+LV+QAIE+C+QQ+    
Sbjct: 1   MIRKYSTMDFSDKMQRCHDYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTT 60

Query: 598 XXXXXXXXXXXXXEG--GPVLEEFIPIKRSLSSSQEEKS-----DEHKSNESNGTKVDWL 440
                            GPVLEEFIPIK++     E++S     ++ K+N+ +G K DWL
Sbjct: 61  QEYFHGQSECSEQTSSDGPVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWL 120

Query: 439 RSVQLWNQNPSSPSKEVIHNSQANSEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVG 260
           RSVQLWNQ P  P KE       + E    VK+NGGAFHPF + K V            G
Sbjct: 121 RSVQLWNQTPDPPVKEDTPKKIPSME----VKKNGGAFHPFKRDKAV------------G 164

Query: 259 TNITMTIQNSVPAASTSSTAD-----NSHKKKEDKEGLN-RKTRRCWSPELHRRFLQALQ 98
           TN T     S P+A+TSSTA+     +S  +KE+KEG + RK RRCWSPELHRRFL ALQ
Sbjct: 165 TNPT-----SAPSAATSSTAETATGCSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQ 219

Query: 97  QLGGSHAATPKQIRELMKVDGLTNDEV*SHLQ 2
           QLGGSH ATPKQIRELMKVDGLTNDEV SHLQ
Sbjct: 220 QLGGSHVATPKQIRELMKVDGLTNDEVKSHLQ 251


>ref|XP_003631224.1| PREDICTED: uncharacterized protein LOC100257723 isoform 2 [Vitis
           vinifera]
          Length = 362

 Score =  241 bits (616), Expect = 2e-61
 Identities = 140/254 (55%), Positives = 167/254 (65%), Gaps = 13/254 (5%)
 Frame = -2

Query: 724 EYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXXXXXXXXXXXXXXXEG--G 551
           +Y++ALEEERRKIQVF RELPLCL+LV+QAIE+C+QQ+                     G
Sbjct: 12  DYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDG 71

Query: 550 PVLEEFIPIKRSLSSSQEEKS-----DEHKSNESNGTKVDWLRSVQLWNQNPSSPSKEVI 386
           PVLEEFIPIK++     E++S     ++ K+N+ +G K DWLRSVQLWNQ P  P KE  
Sbjct: 72  PVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDT 131

Query: 385 HNSQANSEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVGTNITMTIQNSVPAASTSS 206
                + E    VK+NGGAFHPF + K V            GTN T     S P+A+TSS
Sbjct: 132 PKKIPSME----VKKNGGAFHPFKRDKAV------------GTNPT-----SAPSAATSS 170

Query: 205 TAD-----NSHKKKEDKEGLN-RKTRRCWSPELHRRFLQALQQLGGSHAATPKQIRELMK 44
           TA+     +S  +KE+KEG + RK RRCWSPELHRRFL ALQQLGGSH ATPKQIRELMK
Sbjct: 171 TAETATGCSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMK 230

Query: 43  VDGLTNDEV*SHLQ 2
           VDGLTNDEV SHLQ
Sbjct: 231 VDGLTNDEVKSHLQ 244


>emb|CBI27058.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score =  241 bits (616), Expect = 2e-61
 Identities = 140/254 (55%), Positives = 167/254 (65%), Gaps = 13/254 (5%)
 Frame = -2

Query: 724 EYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXXXXXXXXXXXXXXXEG--G 551
           +Y++ALEEERRKIQVF RELPLCL+LV+QAIE+C+QQ+                     G
Sbjct: 6   DYIEALEEERRKIQVFQRELPLCLELVSQAIESCRQQMSGTTQEYFHGQSECSEQTSSDG 65

Query: 550 PVLEEFIPIKRSLSSSQEEKS-----DEHKSNESNGTKVDWLRSVQLWNQNPSSPSKEVI 386
           PVLEEFIPIK++     E++S     ++ K+N+ +G K DWLRSVQLWNQ P  P KE  
Sbjct: 66  PVLEEFIPIKKTSDDEDEQQSHQPNDNKDKNNDKSGKKSDWLRSVQLWNQTPDPPVKEDT 125

Query: 385 HNSQANSEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVGTNITMTIQNSVPAASTSS 206
                + E    VK+NGGAFHPF + K V            GTN T     S P+A+TSS
Sbjct: 126 PKKIPSME----VKKNGGAFHPFKRDKAV------------GTNPT-----SAPSAATSS 164

Query: 205 TAD-----NSHKKKEDKEGLN-RKTRRCWSPELHRRFLQALQQLGGSHAATPKQIRELMK 44
           TA+     +S  +KE+KEG + RK RRCWSPELHRRFL ALQQLGGSH ATPKQIRELMK
Sbjct: 165 TAETATGCSSGSRKEEKEGQSQRKARRCWSPELHRRFLHALQQLGGSHVATPKQIRELMK 224

Query: 43  VDGLTNDEV*SHLQ 2
           VDGLTNDEV SHLQ
Sbjct: 225 VDGLTNDEVKSHLQ 238


>ref|XP_002315957.1| predicted protein [Populus trichocarpa] gi|222864997|gb|EEF02128.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score =  231 bits (589), Expect = 2e-58
 Identities = 138/269 (51%), Positives = 166/269 (61%), Gaps = 28/269 (10%)
 Frame = -2

Query: 724 EYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQVYXXXXXXXXXXXXXXXXEG--- 554
           EY++ALEEERRKIQVF RELPLCL+LV QAIE CK+++                 +    
Sbjct: 12  EYVEALEEERRKIQVFERELPLCLELVTQAIEACKRELSGTTEDHNMHGQSECSEQTSSE 71

Query: 553 GPVLEEFIPIKRSLSSSQEEKSDEH--------------KSNESNGT--------KVDWL 440
           GPVLEEFIPIKR+ SS  EE  + H              K N+SN +        K DWL
Sbjct: 72  GPVLEEFIPIKRTHSSDDEENDNNHDDDDHQEQQSQNDNKRNKSNSSISNNDHKKKSDWL 131

Query: 439 RSVQLWNQNPSSPSKEVIHNSQANSEKVIGVKENG--GAFHPFHKSKVV-KPMVKAVKEA 269
           RSVQLWNQ+P  P K+ +    A +E    VK NG  GAF PFH+ K V K   +A+ +A
Sbjct: 132 RSVQLWNQSPDPPQKQDLPRKAAVTE----VKRNGAGGAFQPFHREKSVGKSSNQAISKA 187

Query: 268 EVGTNITMTIQNSVPAASTSSTADNSHKKKEDKEGLNRKTRRCWSPELHRRFLQALQQLG 89
                 + T  +S+  A T  T    +KK++ ++G  RK RRCWSPELHRRFL +LQQLG
Sbjct: 188 PPSVPASAT--SSIAGAVTGGTGGGGNKKEDKEKGNQRKQRRCWSPELHRRFLHSLQQLG 245

Query: 88  GSHAATPKQIRELMKVDGLTNDEV*SHLQ 2
           GSHAATPKQIRELMKVDGLTNDEV SHLQ
Sbjct: 246 GSHAATPKQIRELMKVDGLTNDEVKSHLQ 274


>ref|XP_002893418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339260|gb|EFH69677.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score =  221 bits (563), Expect = 2e-55
 Identities = 129/259 (49%), Positives = 162/259 (62%), Gaps = 9/259 (3%)
 Frame = -2

Query: 751 HTTNKKSYEEYMQALEEERRKIQVFHRELPLCLDLVNQAIENCKQQV------YXXXXXX 590
           HT   K   EY++ALE E++KIQVF RELPLCL+LV QAIE+C++++             
Sbjct: 12  HTQKMKRCHEYVEALEVEQKKIQVFQRELPLCLELVTQAIESCRKELSESSEHVGGQSEC 71

Query: 589 XXXXXXXXXXEGGPVLEEFIPIKRSLSSSQE-EKSDEHKSNESNGTKVDWLRSVQLWNQN 413
                      GG V EEFIPIK + SSS E +K +E ++N  +  K DWLRSVQLWNQ+
Sbjct: 72  SERTTSECGGGGGVVFEEFIPIKWTSSSSDETDKDEEAENNGGDKKKSDWLRSVQLWNQS 131

Query: 412 PS-SPSKEVIHNSQANSEKVIGVKENGGAFHPFHKSKVVKPMVKAVKEAEVGTNITMTIQ 236
           P   P ++ + N + N   VI VK N GAF PF K K         K A+     T+T  
Sbjct: 132 PDPKPKEDHVINKKTN---VIEVKRNAGAFQPFQKEKP--------KAADSQPLKTITPT 180

Query: 235 NSVPAASTSSTADNSHKKKEDKEG-LNRKTRRCWSPELHRRFLQALQQLGGSHAATPKQI 59
           ++  ++ST+ T     + ++ K+   NRK RRCWSPELHRRFL ALQQLGGSH ATPKQI
Sbjct: 181 STTTSSSTAETVGGKSELEDPKQSHSNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQI 240

Query: 58  RELMKVDGLTNDEV*SHLQ 2
           R+LMKVDGLTNDEV SHLQ
Sbjct: 241 RDLMKVDGLTNDEVKSHLQ 259


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