BLASTX nr result
ID: Coptis25_contig00010721
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010721
(1416 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23720.3| unnamed protein product [Vitis vinifera] 300 6e-79
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 293 6e-77
ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group] g... 292 2e-76
gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays] 292 2e-76
ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea ma... 292 2e-76
>emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 300 bits (768), Expect = 6e-79
Identities = 141/173 (81%), Positives = 161/173 (93%)
Frame = +1
Query: 520 NTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDCNTVL 699
NTKLYFGNLPY+CDSAQLAGIIQ+Y SPELVEVLY+R TG+SRGFAFVTMSSVEDCN V+
Sbjct: 110 NTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVI 169
Query: 700 QNLDGSLYGGRTLRVNFADKPKPKTPLYPETEYKLFVGNLSWTVTNEILNEAFQGHGTVV 879
+NLDGS YGGRTLRVNF+DKPKPK PLYPETEYKLFVGNLSW+VT+E LN+ FQ +G V+
Sbjct: 170 ENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVI 229
Query: 880 GARVLYDGDTGQSRGYGFVCYATREEMEVALNSLNGVELEGRAMRVSLAQGKR 1038
GARVLYDG+TG+SRGYGFVCY+T+ EM+ AL SLNGVELEGRA+R+SLAQG+R
Sbjct: 230 GARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRR 282
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 293 bits (751), Expect = 6e-77
Identities = 143/173 (82%), Positives = 158/173 (91%)
Frame = +1
Query: 520 NTKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDCNTVL 699
NTKLYFGNLPYN DSAQLAGIIQDY +PELVEVLYDR TG+SRGFAFVTMS+VEDCN V+
Sbjct: 112 NTKLYFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVI 171
Query: 700 QNLDGSLYGGRTLRVNFADKPKPKTPLYPETEYKLFVGNLSWTVTNEILNEAFQGHGTVV 879
+NLDGS + GR LRVNF+DKPKPK PLYPETE+KLFVGNLSW+VT+E L EAFQ +G +V
Sbjct: 172 ENLDGSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIV 231
Query: 880 GARVLYDGDTGQSRGYGFVCYATREEMEVALNSLNGVELEGRAMRVSLAQGKR 1038
GARVLYDG+TG+SRGYGFVCYATR EME AL SLNGVELEGRAMRVSLAQGK+
Sbjct: 232 GARVLYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKK 284
>ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein
RNP1 precursor [Oryza sativa Japonica Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein
RNP1 precursor [Oryza sativa Japonica Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa
Japonica Group] gi|125584133|gb|EAZ25064.1| hypothetical
protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 316
Score = 292 bits (747), Expect = 2e-76
Identities = 137/172 (79%), Positives = 158/172 (91%)
Frame = +1
Query: 523 TKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDCNTVLQ 702
TKLYFGNLPYNCDSAQLAGI+QDYA+PE+VEVLYDR TG+SRGFAFVTMS++EDC V++
Sbjct: 145 TKLYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIK 204
Query: 703 NLDGSLYGGRTLRVNFADKPKPKTPLYPETEYKLFVGNLSWTVTNEILNEAFQGHGTVVG 882
NLDGSLY GRT+RVNFADKPKPK PLYPETE+KLFVGNLSWTVT+E+L E FQ G VVG
Sbjct: 205 NLDGSLYSGRTMRVNFADKPKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVG 264
Query: 883 ARVLYDGDTGQSRGYGFVCYATREEMEVALNSLNGVELEGRAMRVSLAQGKR 1038
ARVLYDG+TG+SRGYGFVCY+T+EEM+ AL+SLNG ELEGR +RV+LA GK+
Sbjct: 265 ARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLALGKK 316
>gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 292 bits (747), Expect = 2e-76
Identities = 137/172 (79%), Positives = 161/172 (93%)
Frame = +1
Query: 523 TKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDCNTVLQ 702
TKLYFGNLPYNCDSAQLAGI+Q+YASPE+VEVLYDRTTG+SRGFAFVTM++V+DC V++
Sbjct: 116 TKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIK 175
Query: 703 NLDGSLYGGRTLRVNFADKPKPKTPLYPETEYKLFVGNLSWTVTNEILNEAFQGHGTVVG 882
NLDGSLYGGRT++VNFAD+PKPK LYPETE+KLFVGNLSWTVT+E+L EAF GTVVG
Sbjct: 176 NLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVG 235
Query: 883 ARVLYDGDTGQSRGYGFVCYATREEMEVALNSLNGVELEGRAMRVSLAQGKR 1038
ARVLYDG+TG+SRGYGFVCY+TREEM+ AL+SLNG+E+EGR MRV+LA GK+
Sbjct: 236 ARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLALGKK 287
>ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 292 bits (747), Expect = 2e-76
Identities = 137/172 (79%), Positives = 161/172 (93%)
Frame = +1
Query: 523 TKLYFGNLPYNCDSAQLAGIIQDYASPELVEVLYDRTTGKSRGFAFVTMSSVEDCNTVLQ 702
TKLYFGNLPYNCDSAQLAGI+Q+YASPE+VEVLYDRTTG+SRGFAFVTM++V+DC V++
Sbjct: 116 TKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIK 175
Query: 703 NLDGSLYGGRTLRVNFADKPKPKTPLYPETEYKLFVGNLSWTVTNEILNEAFQGHGTVVG 882
NLDGSLYGGRT++VNFAD+PKPK LYPETE+KLFVGNLSWTVT+E+L EAF GTVVG
Sbjct: 176 NLDGSLYGGRTMKVNFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVG 235
Query: 883 ARVLYDGDTGQSRGYGFVCYATREEMEVALNSLNGVELEGRAMRVSLAQGKR 1038
ARVLYDG+TG+SRGYGFVCY+TREEM+ AL+SLNG+E+EGR MRV+LA GK+
Sbjct: 236 ARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNLALGKK 287