BLASTX nr result

ID: Coptis25_contig00010715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010715
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   420   e-115
ref|XP_003613125.1| ABC transporter B family member [Medicago tr...   414   e-113
ref|XP_002315672.1| ABC transporter family protein [Populus tric...   406   e-111
emb|CBI18648.3| unnamed protein product [Vitis vinifera]              403   e-110
ref|XP_003517500.1| PREDICTED: ABC transporter B family member 2...   400   e-109

>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
            [Vitis vinifera]
          Length = 705

 Score =  420 bits (1080), Expect = e-115
 Identities = 207/281 (73%), Positives = 232/281 (82%)
 Frame = +3

Query: 327  VREIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXXSE 506
            +R I  GGS+W+  +H   ++  KPVT + AL+RMW LVA DRW+I++          SE
Sbjct: 99   IRSIWPGGSWWSLSDHADFIMTAKPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAVSE 158

Query: 507  ISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMRE 686
            ISIPH+LTASIFSAQSG  VVF  N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE
Sbjct: 159  ISIPHFLTASIFSAQSGEIVVFHRNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRE 218

Query: 687  MLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFI 866
             LYSALLFQDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL +
Sbjct: 219  TLYSALLFQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLV 278

Query: 867  LSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGT 1046
            LSWPL L T+ ICS L  IML YG+YQKKAA+L QEFTASANEV QETFSL+RTVRVYGT
Sbjct: 279  LSWPLGLCTMMICSTLLIIMLLYGRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVYGT 338

Query: 1047 EIEELGRYKLWLKKLADISLRQSVAYGFWNLSFNTLYHSTQ 1169
            E +E+GRYK WL K+ADISLRQS AYG WNLSFNTLYHSTQ
Sbjct: 339  EEQEVGRYKQWLGKIADISLRQSAAYGLWNLSFNTLYHSTQ 379


>ref|XP_003613125.1| ABC transporter B family member [Medicago truncatula]
            gi|355514460|gb|AES96083.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 712

 Score =  414 bits (1064), Expect = e-113
 Identities = 217/351 (61%), Positives = 255/351 (72%)
 Frame = +3

Query: 117  QPIFPIHHTNSHFQLYPCISTHIYKKPIQLKSAFFDEFSVGSFDRGANXXXXXXXXNDGI 296
            QP+      N H   +   S+        +KS+  +E S+ +    A+        +D  
Sbjct: 33   QPLITFSSVNRHH--FTLSSSKRILLSSSIKSSSINEVSIHNNSESASNA------SDEF 84

Query: 297  FENLKKWSVLVREIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYSXX 476
             + ++K    +  I  GG++WNF +  +V + N+PVT  +AL +MW+LVA DRWVI++  
Sbjct: 85   LDRIRKLVSFLPSIFPGGTWWNFSDDVEVSMFNQPVTVWYALGKMWNLVAKDRWVIFAAF 144

Query: 477  XXXXXXXXSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIA 656
                    SEISIPH+LTASIFSAQ G   VF GN RLLIL+C TSGICSG+RGC F IA
Sbjct: 145  SALIIAAVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILMCVTSGICSGIRGCFFGIA 204

Query: 657  NMILVKRMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQ 836
            NMILVKRMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+ILRN+LQ
Sbjct: 205  NMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQ 264

Query: 837  GTGALIYLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFS 1016
            G G+LIYL ILSWPL L TL ICS+L+ +ML YG YQKKAARL QE TASAN V QETFS
Sbjct: 265  GGGSLIYLLILSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFS 324

Query: 1017 LIRTVRVYGTEIEELGRYKLWLKKLADISLRQSVAYGFWNLSFNTLYHSTQ 1169
            LIRTVRVYGTE EE GRYK WL+KLADISLRQS AYGFWN SFNTLYHSTQ
Sbjct: 325  LIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGFWNFSFNTLYHSTQ 375


>ref|XP_002315672.1| ABC transporter family protein [Populus trichocarpa]
            gi|222864712|gb|EEF01843.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 797

 Score =  406 bits (1043), Expect = e-111
 Identities = 201/275 (73%), Positives = 226/275 (82%)
 Frame = +3

Query: 345  GGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXXSEISIPHY 524
            GG++W+F +   + +  KPVT   AL RMW LVA DRWVI++          SEISIPH+
Sbjct: 117  GGNWWSFSDEADIKIMAKPVTVWRALTRMWHLVAQDRWVIFAAFTALIVAALSEISIPHF 176

Query: 525  LTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSAL 704
            LTASIFSAQ+ +  VF  N RLL+ LC  +GICSG+RGCCF IANMILVKRMRE LYSAL
Sbjct: 177  LTASIFSAQTATVAVFHRNVRLLVALCVVAGICSGIRGCCFGIANMILVKRMRETLYSAL 236

Query: 705  LFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLA 884
            L QDISFFD+ETVGDLTSRLGSDCQQVSRVIGNDLN+ILRN+LQ TGALIYL ILSW L 
Sbjct: 237  LLQDISFFDNETVGDLTSRLGSDCQQVSRVIGNDLNLILRNVLQATGALIYLIILSWKLG 296

Query: 885  LSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEIEELG 1064
              TL IC+ L+ +ML YGQYQKKAA+LTQEFTASANEV QETFSL+RTVR+YGTE  ELG
Sbjct: 297  SFTLLICTTLAAVMLIYGQYQKKAAKLTQEFTASANEVAQETFSLMRTVRIYGTEKVELG 356

Query: 1065 RYKLWLKKLADISLRQSVAYGFWNLSFNTLYHSTQ 1169
            RYKLWL+KLA+ISLRQS AYGFWNLSFNTLYHSTQ
Sbjct: 357  RYKLWLEKLANISLRQSAAYGFWNLSFNTLYHSTQ 391


>emb|CBI18648.3| unnamed protein product [Vitis vinifera]
          Length = 587

 Score =  403 bits (1035), Expect = e-110
 Identities = 200/258 (77%), Positives = 219/258 (84%)
 Frame = +3

Query: 396  KPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXXSEISIPHYLTASIFSAQSGSSVVFK 575
            KPVT + AL+RMW LVA DRW+I++          SEISIPH+LTASIFSAQSG  VVF 
Sbjct: 4    KPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVFH 63

Query: 576  GNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSALLFQDISFFDSETVGDLT 755
             N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE LYSALLFQDISFFD+ETVGDLT
Sbjct: 64   RNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSALLFQDISFFDNETVGDLT 123

Query: 756  SRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLAICSVLSTIMLFY 935
            SRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL +LSWPL L T+ ICS L  IML Y
Sbjct: 124  SRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLGLCTMMICSTLLIIMLLY 183

Query: 936  GQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEIEELGRYKLWLKKLADISLRQS 1115
            G+YQKKAA+L QEFTASANEV QETFSL+RTVRVYGTE +E+GRYK WL K+ADISLRQS
Sbjct: 184  GRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVYGTEEQEVGRYKQWLGKIADISLRQS 243

Query: 1116 VAYGFWNLSFNTLYHSTQ 1169
             AYG WNLSFNTLYHSTQ
Sbjct: 244  AAYGLWNLSFNTLYHSTQ 261


>ref|XP_003517500.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
            [Glycine max]
          Length = 701

 Score =  400 bits (1028), Expect = e-109
 Identities = 202/293 (68%), Positives = 229/293 (78%)
 Frame = +3

Query: 291  GIFENLKKWSVLVREIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYS 470
            G+ + ++KW   +  I  GG +W F     V V  +PVT   AL +MWDLVA DRWVI++
Sbjct: 84   GLLDRIRKWVGFLPSILPGGRWWEFSGDVDVQVVAQPVTVWRALGKMWDLVARDRWVIFA 143

Query: 471  XXXXXXXXXXSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFS 650
                      SEISIPH+LTASIFSAQS    VF  N RLL+LLC  SGICSG+RGC F 
Sbjct: 144  AFSALIVAAVSEISIPHFLTASIFSAQSADLAVFHRNVRLLVLLCVASGICSGIRGCFFG 203

Query: 651  IANMILVKRMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNI 830
            IANMILVKRMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I+RN+
Sbjct: 204  IANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLIMRNV 263

Query: 831  LQGTGALIYLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQET 1010
            LQG G+LIYL ILSWPL LSTL +CS+L+ +ML YG+YQKKAARL QE TASAN+V QE 
Sbjct: 264  LQGGGSLIYLLILSWPLGLSTLVVCSILAAVMLRYGRYQKKAARLIQEVTASANDVAQEM 323

Query: 1011 FSLIRTVRVYGTEIEELGRYKLWLKKLADISLRQSVAYGFWNLSFNTLYHSTQ 1169
            FSLIRTVRVYGTE EE GRYK WL+KLADISLRQS AYG WN SFN LYHSTQ
Sbjct: 324  FSLIRTVRVYGTEEEEHGRYKWWLEKLADISLRQSAAYGVWNFSFNILYHSTQ 376


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