BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010687
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...    93   2e-17
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays]             87   1e-15

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/75 (66%), Positives = 54/75 (72%)
 Frame = +2

Query: 2   VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181
           +Y KL ELME I +LGYKE               + LWYHSEKLAVAFGVVS AAPPGKA
Sbjct: 478 IYAKLVELMEKIEELGYKE-----------GVKKETLWYHSEKLAVAFGVVSDAAPPGKA 526

Query: 182 LRVVKNLRICKDCHE 226
           LR+VKNLRICKDCHE
Sbjct: 527 LRIVKNLRICKDCHE 541


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/71 (59%), Positives = 54/71 (76%)
 Frame = +2

Query: 11  KLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRV 190
           KL+EL+  I KLGY  V    LH +   E  +AL YHSEKLA+A+G+++G APPGKALR+
Sbjct: 477 KLKELVGEIEKLGYVPVCSETLHKVGEKERKEALLYHSEKLALAYGILTGVAPPGKALRI 536

Query: 191 VKNLRICKDCH 223
           +KNLRIC+DCH
Sbjct: 537 IKNLRICRDCH 547


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/75 (61%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181
           +Y KL ELM  I KLGY++               +ALWYHSEKLAVAFGV+ G APPGK 
Sbjct: 465 IYQKLAELMGDIEKLGYEK-------------RKEALWYHSEKLAVAFGVLCGPAPPGKP 511

Query: 182 LRVVKNLRICKDCHE 226
           LR+VKNLRICKDCHE
Sbjct: 512 LRIVKNLRICKDCHE 526


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/75 (60%), Positives = 53/75 (70%)
 Frame = +2

Query: 2   VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181
           +Y KL ELM  I KLGY++               ++LWYHSEKLAVAFGV+ G+APPGK 
Sbjct: 465 IYQKLAELMGDIEKLGYEK-------------RKESLWYHSEKLAVAFGVLCGSAPPGKP 511

Query: 182 LRVVKNLRICKDCHE 226
           LR+VKNLRICKDCHE
Sbjct: 512 LRIVKNLRICKDCHE 526


>tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays]
          Length = 563

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181
           +YDKL EL++ + KLGYKE  +              LW+HSE+LA+A+G++SGAAP GK 
Sbjct: 467 IYDKLHELIQEVEKLGYKEADER-------------LWHHSERLALAYGLISGAAPSGKV 513

Query: 182 LRVVKNLRICKDCHE 226
           LR+VKNLRIC  CHE
Sbjct: 514 LRIVKNLRICAHCHE 528