BLASTX nr result
ID: Coptis25_contig00010687
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010687 (228 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19 ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi... 93 2e-17 ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi... 92 3e-17 ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-17 tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays] 87 1e-15 >ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170 [Vitis vinifera] Length = 590 Score = 98.6 bits (244), Expect = 5e-19 Identities = 50/75 (66%), Positives = 54/75 (72%) Frame = +2 Query: 2 VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181 +Y KL ELME I +LGYKE + LWYHSEKLAVAFGVVS AAPPGKA Sbjct: 478 IYAKLVELMEKIEELGYKE-----------GVKKETLWYHSEKLAVAFGVVSDAAPPGKA 526 Query: 182 LRVVKNLRICKDCHE 226 LR+VKNLRICKDCHE Sbjct: 527 LRIVKNLRICKDCHE 541 >ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis sativus] gi|449487598|ref|XP_004157706.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Cucumis sativus] Length = 583 Score = 93.2 bits (230), Expect = 2e-17 Identities = 42/71 (59%), Positives = 54/71 (76%) Frame = +2 Query: 11 KLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKALRV 190 KL+EL+ I KLGY V LH + E +AL YHSEKLA+A+G+++G APPGKALR+ Sbjct: 477 KLKELVGEIEKLGYVPVCSETLHKVGEKERKEALLYHSEKLALAYGILTGVAPPGKALRI 536 Query: 191 VKNLRICKDCH 223 +KNLRIC+DCH Sbjct: 537 IKNLRICRDCH 547 >ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] Length = 561 Score = 92.4 bits (228), Expect = 3e-17 Identities = 46/75 (61%), Positives = 52/75 (69%) Frame = +2 Query: 2 VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181 +Y KL ELM I KLGY++ +ALWYHSEKLAVAFGV+ G APPGK Sbjct: 465 IYQKLAELMGDIEKLGYEK-------------RKEALWYHSEKLAVAFGVLCGPAPPGKP 511 Query: 182 LRVVKNLRICKDCHE 226 LR+VKNLRICKDCHE Sbjct: 512 LRIVKNLRICKDCHE 526 >ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like [Glycine max] Length = 561 Score = 92.0 bits (227), Expect = 4e-17 Identities = 45/75 (60%), Positives = 53/75 (70%) Frame = +2 Query: 2 VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181 +Y KL ELM I KLGY++ ++LWYHSEKLAVAFGV+ G+APPGK Sbjct: 465 IYQKLAELMGDIEKLGYEK-------------RKESLWYHSEKLAVAFGVLCGSAPPGKP 511 Query: 182 LRVVKNLRICKDCHE 226 LR+VKNLRICKDCHE Sbjct: 512 LRIVKNLRICKDCHE 526 >tpg|DAA43298.1| TPA: vegetative storage protein [Zea mays] Length = 563 Score = 87.0 bits (214), Expect = 1e-15 Identities = 40/75 (53%), Positives = 52/75 (69%) Frame = +2 Query: 2 VYDKLEELMEAIRKLGYKEVSDAMLHNMDVAENSKALWYHSEKLAVAFGVVSGAAPPGKA 181 +YDKL EL++ + KLGYKE + LW+HSE+LA+A+G++SGAAP GK Sbjct: 467 IYDKLHELIQEVEKLGYKEADER-------------LWHHSERLALAYGLISGAAPSGKV 513 Query: 182 LRVVKNLRICKDCHE 226 LR+VKNLRIC CHE Sbjct: 514 LRIVKNLRICAHCHE 528