BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010674
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ...   323   5e-86
emb|CBI35119.3| unnamed protein product [Vitis vinifera]              322   2e-85
ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4...   322   2e-85
emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]   322   2e-85
ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|2...   297   5e-78

>ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 310

 Score =  323 bits (829), Expect = 5e-86
 Identities = 169/282 (59%), Positives = 211/282 (74%), Gaps = 2/282 (0%)
 Frame = +3

Query: 126 MEVKVRTVRSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSP 305
           MEVK RT RSLV++LSS+SEQT+ +A+ +LRL+TKHDPDSR +I E  A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIAECGAIPYLAETLYSS 60

Query: 306 IQTAQENAVATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXX- 482
             TAQENA ATLLN+SIS+RD LMSTRG+LDA                            
Sbjct: 61  SHTAQENAAATLLNLSISTRDSLMSTRGLLDALGHALSHHSTTTSPLAVQSSAATLHSLL 120

Query: 483 -VDSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVG 659
            VDSYRPIIG+KRDIVY+LI+I+K  NS PR++KD LKA+FG+ALYPLNR  +IDLG V 
Sbjct: 121 IVDSYRPIIGSKRDIVYSLIDIVKSPNSPPRSVKDALKAMFGIALYPLNRCTLIDLGAVA 180

Query: 660 PLFSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARE 839
           PLFSLV+KDGR+GIVEDATAV+AQ+AGC ES   F + SG+G+L+DLLD  TGSS+R +E
Sbjct: 181 PLFSLVLKDGRVGIVEDATAVVAQIAGCEESEGEFARYSGVGILIDLLDLATGSSLRIKE 240

Query: 840 NAVSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 965
           NAVSALLN++RCG E++  DV++     ++E I +VAENG+S
Sbjct: 241 NAVSALLNLVRCGGERVAADVRDMAA-IVVEGIKEVAENGTS 281


>emb|CBI35119.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  322 bits (825), Expect = 2e-85
 Identities = 169/279 (60%), Positives = 209/279 (74%)
 Frame = +3

Query: 126 MEVKVRTVRSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSP 305
           MEVK RT RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR  I ++ A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSA 60

Query: 306 IQTAQENAVATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 485
           +   QENA ATLLN+SISSR LLMSTRG+LDA                            
Sbjct: 61  LPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVD 120

Query: 486 DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPL 665
           D YRPIIGAKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  L
Sbjct: 121 DDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAAL 180

Query: 666 FSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENA 845
           F+L VKDGR+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD  TGSSIR +ENA
Sbjct: 181 FTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENA 240

Query: 846 VSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGS 962
           VSALLN+++CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 241 VSALLNLVQCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
          Length = 309

 Score =  322 bits (825), Expect = 2e-85
 Identities = 169/279 (60%), Positives = 209/279 (74%)
 Frame = +3

Query: 126 MEVKVRTVRSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSP 305
           MEVK RT RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR  I ++ A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSA 60

Query: 306 IQTAQENAVATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 485
           +   QENA ATLLN+SISSR LLMSTRG+LDA                            
Sbjct: 61  LPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVD 120

Query: 486 DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPL 665
           D YRPIIGAKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  L
Sbjct: 121 DDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAAL 180

Query: 666 FSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENA 845
           F+L VKDGR+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD  TGSSIR +ENA
Sbjct: 181 FTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENA 240

Query: 846 VSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGS 962
           VSALLN+++CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 241 VSALLNLVQCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]
          Length = 309

 Score =  322 bits (825), Expect = 2e-85
 Identities = 171/279 (61%), Positives = 208/279 (74%)
 Frame = +3

Query: 126 MEVKVRTVRSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSP 305
           MEVK RT RSLV RLSS+S+QT+ +A+C+LRL++KHDPDSR  I ++ A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSA 60

Query: 306 IQTAQENAVATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 485
           +   QENA ATLLN+SISSR LLMSTRG+LDA                            
Sbjct: 61  LPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVD 120

Query: 486 DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPL 665
           D YRPIIGAKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  L
Sbjct: 121 DDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAAL 180

Query: 666 FSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARENA 845
           FSL VKDGR+GIVEDATAVIAQ+AGC E G+AF+KVSGIGVLVDLLD  TGSSIR +ENA
Sbjct: 181 FSLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGVLVDLLDPSTGSSIRTKENA 240

Query: 846 VSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGS 962
           VSALLN+ +CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 241 VSALLNLAQCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|222846458|gb|EEE84005.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  297 bits (760), Expect = 5e-78
 Identities = 167/282 (59%), Positives = 200/282 (70%), Gaps = 2/282 (0%)
 Frame = +3

Query: 126 MEVKVRTVRSLVNRLSSISEQTQLDAICQLRLMTKHDPDSRSLIGESSALPILTETLYSP 305
           MEVK RT R LV RL S+SEQT+ +A+ +LRLMTK+D +SR +I E+ A+P L ETLYS 
Sbjct: 1   MEVKRRTARLLVTRLGSVSEQTRSEALAELRLMTKNDAESRPIIAEAGAIPYLEETLYSS 60

Query: 306 IQTAQENAVATLLNISISSRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 485
              +Q+NA A LLNISISSR  LMSTRG+LDA                           +
Sbjct: 61  SHDSQDNAAAILLNISISSRTALMSTRGLLDAISHVLRHHATNSSPFAVQSSAATLHSLL 120

Query: 486 --DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVG 659
             DSYRP+IGAKRDIVY+LIEIIK  NS PR++KD LKALFG+AL+PLNRAN+I LG V 
Sbjct: 121 VDDSYRPVIGAKRDIVYSLIEIIKRPNSPPRSVKDALKALFGIALFPLNRANLIGLGGVA 180

Query: 660 PLFSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSIRARE 839
            LFSLV+KDGR+GIVEDATAVIAQ+AGC ES   F KVSG+ VLVDLLD  TGSS R +E
Sbjct: 181 ALFSLVLKDGRVGIVEDATAVIAQIAGCAESEREFWKVSGVKVLVDLLDVGTGSSERVKE 240

Query: 840 NAVSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 965
           NAV ALLN++ CG   +V+ VKE G    +E I DV ENG++
Sbjct: 241 NAVGALLNLVSCGGGGVVKQVKEMG-PGAVEGIRDVVENGTA 281