BLASTX nr result

ID: Coptis25_contig00010671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010671
         (1600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267...   186   2e-44
emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]   186   2e-44
ref|XP_002524522.1| protein with unknown function [Ricinus commu...   185   3e-44
ref|XP_004146085.1| PREDICTED: uncharacterized protein LOC101222...   182   3e-43
ref|XP_002298910.1| predicted protein [Populus trichocarpa] gi|2...   178   3e-42

>ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267416 [Vitis vinifera]
            gi|302142872|emb|CBI20167.3| unnamed protein product
            [Vitis vinifera]
          Length = 330

 Score =  186 bits (471), Expect = 2e-44
 Identities = 111/269 (41%), Positives = 166/269 (61%), Gaps = 3/269 (1%)
 Frame = -2

Query: 1182 ELKKKVRKLEMEVRXXXXXXXXXXXXEQPRVQLKGIRLSSLFECKTNNKHYVNVKKISGN 1003
            ELKK++R+LE EVR               R++   +  S   + K   K    +K+ +  
Sbjct: 76   ELKKRLRELEREVR---------------RLKANAVTESETPKKKKELKKDGVLKEQT-- 118

Query: 1002 KPIVPKEMQVSSNVECTKQEQKVSRNVKSKRLKKDEPM-FKDIWPEMRLFANRLYEECYL 826
            KP       + SN +    ++  S +++ K  +++EP+ FKD+  +M LF + L+ E Y 
Sbjct: 119  KPKTSSLYSLFSNGKNRDGKRGESGSLEKKEDEEEEPVVFKDLSEDMLLFVSHLHREGYF 178

Query: 825  NELNFLRKKEFDLCTLGNRNYREFLRFAAEKFGRDHQEIAKWLSGSDLKKVALFGCPSVD 646
             + NFL +         +   R +++FAAE+FG+D+QEIAKWLSGSDLKKVALFGCPS+ 
Sbjct: 179  KDANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLS 238

Query: 645  KKSVFAAKKLRHFFNIQEDIVCRGCKLNSSCKFVNKTAW-DKTSNLNLADALRTLTSYSL 469
            +KSVFAAK+LR FF IQE++VC  C L  SCKFVN++ W   T +LNL+  +R LT Y++
Sbjct: 239  RKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAM 298

Query: 468  -NLTLQLAIPNEVKVSISKLLKEVVDLNQ 385
             ++  QL +P+EVK S+ +LLKEV+ L++
Sbjct: 299  ESMPPQLVLPDEVKASVGRLLKEVLRLSE 327


>emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]
          Length = 330

 Score =  186 bits (471), Expect = 2e-44
 Identities = 111/269 (41%), Positives = 166/269 (61%), Gaps = 3/269 (1%)
 Frame = -2

Query: 1182 ELKKKVRKLEMEVRXXXXXXXXXXXXEQPRVQLKGIRLSSLFECKTNNKHYVNVKKISGN 1003
            ELKK++R+LE EVR               R++   +  S   + K   K    +K+ +  
Sbjct: 76   ELKKRLRELEREVR---------------RLKANAVTESETPKKKKELKKDGVLKEQT-- 118

Query: 1002 KPIVPKEMQVSSNVECTKQEQKVSRNVKSKRLKKDEPM-FKDIWPEMRLFANRLYEECYL 826
            KP       + SN +    ++  S +++ K  +++EP+ FKD+  +M LF + L+ E Y 
Sbjct: 119  KPKTSSLYSLFSNGKNRDGKRGESGSLEKKEDEEEEPVVFKDLSEDMLLFVSHLHREGYF 178

Query: 825  NELNFLRKKEFDLCTLGNRNYREFLRFAAEKFGRDHQEIAKWLSGSDLKKVALFGCPSVD 646
             + NFL +         +   R +++FAAE+FG+D+QEIAKWLSGSDLKKVALFGCPS+ 
Sbjct: 179  KDANFLPRSGLIYGAFDDSYSRAYIKFAAERFGKDNQEIAKWLSGSDLKKVALFGCPSLS 238

Query: 645  KKSVFAAKKLRHFFNIQEDIVCRGCKLNSSCKFVNKTAW-DKTSNLNLADALRTLTSYSL 469
            +KSVFAAK+LR FF IQE++VC  C L  SCKFVN++ W   T +LNL+  +R LT Y++
Sbjct: 239  RKSVFAAKRLRTFFRIQEELVCSKCVLKQSCKFVNQSVWKGDTKSLNLSVVMRLLTLYAM 298

Query: 468  -NLTLQLAIPNEVKVSISKLLKEVVDLNQ 385
             ++  QL +P+EVK S+ +LLKEV+ L++
Sbjct: 299  ESMPPQLVLPDEVKASVGRLLKEVLRLSE 327


>ref|XP_002524522.1| protein with unknown function [Ricinus communis]
            gi|223536196|gb|EEF37849.1| protein with unknown function
            [Ricinus communis]
          Length = 299

 Score =  185 bits (470), Expect = 3e-44
 Identities = 97/229 (42%), Positives = 143/229 (62%), Gaps = 3/229 (1%)
 Frame = -2

Query: 1062 LFECKTNNKHYVNVKKISGNKPIVPKEMQVSSNVECTKQEQKVSRNVKSKRLKKDEPM-F 886
            L+E +   +H    +  +  K   PK+ +    +   K+   ++  V+++R K + P+  
Sbjct: 71   LWELEREIRHLKEAEPKNNTKVAQPKKTKSLYGLFTGKE---IAEKVETERKKLEGPLNL 127

Query: 885  KDIWPEMRLFANRLYEECYLNELNFLRKKEFDLCTLGNRNYREFLRFAAEKFGRDHQEIA 706
            K++ P+M++F N LY E Y  + NF R    D     +   R+F++FA E F +DHQEIA
Sbjct: 128  KELSPDMKMFVNHLYNEGYFTKANFFRNSHIDFSCFNDSYGRDFIKFAVEMFAKDHQEIA 187

Query: 705  KWLSGSDLKKVALFGCPSVDKKSVFAAKKLRHFFNIQEDIVCRGCKLNSSCKFVNKTAWD 526
            KWLSGSDLKKVALFGCPS+ KK+VF+AK+LR +  IQEDIVC  C L  SCKFVN++ W+
Sbjct: 188  KWLSGSDLKKVALFGCPSLAKKNVFSAKRLRKYLEIQEDIVCNKCVLRHSCKFVNQSVWN 247

Query: 525  KT-SNLNLADALRTLTSYSLNLT-LQLAIPNEVKVSISKLLKEVVDLNQ 385
                 LNL   +R +T Y+L L    L +P+E+K S+ +LLKE++ L+Q
Sbjct: 248  SDYKTLNLVVLMRVITLYALELAHPDLPVPDEIKGSVRRLLKEILKLSQ 296


>ref|XP_004146085.1| PREDICTED: uncharacterized protein LOC101222492 [Cucumis sativus]
           gi|449521303|ref|XP_004167669.1| PREDICTED:
           uncharacterized LOC101222492 [Cucumis sativus]
          Length = 277

 Score =  182 bits (461), Expect = 3e-43
 Identities = 96/202 (47%), Positives = 130/202 (64%), Gaps = 2/202 (0%)
 Frame = -2

Query: 987 KEMQVSSNVECTKQEQKVSRNVKSKRLKKDEPMFKDIWPEMRLFANRLYEECYLNELNFL 808
           K  +     E T  + KV      K  ++D  + K + P+M +F   LY+E Y N  NFL
Sbjct: 70  KSQEGKGRNEETVLKGKVGSEGNKKLTREDALLRKQLSPDMEMFVRHLYQEGYFNYANFL 129

Query: 807 RKKEFDLCTLGNRNYREFLRFAAEKFGRDHQEIAKWLSGSDLKKVALFGCPSVDKKSVFA 628
              +F L     R+ R+F++ AA++FGRD+QEIAKWLSGSDL+KVA FGCPS  +K VFA
Sbjct: 130 PDNKFVLSYFECRHGRDFIKSAAQRFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFA 189

Query: 627 AKKLRHFFNIQEDIVCRGCKLNSSCKFVNKTAWDK-TSNLNLADALRTLTSYSLN-LTLQ 454
           AK+LR FF IQED VC  C L  SCK+VN+  W++ T NLNL   L+  T Y+L  +  Q
Sbjct: 190 AKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNEDTKNLNLGVVLQVTTQYALEAIPEQ 249

Query: 453 LAIPNEVKVSISKLLKEVVDLN 388
           L IP +VK S+S+LLKE+++L+
Sbjct: 250 LIIPEDVKASVSRLLKEILNLS 271


>ref|XP_002298910.1| predicted protein [Populus trichocarpa] gi|222846168|gb|EEE83715.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  178 bits (452), Expect = 3e-42
 Identities = 90/182 (49%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
 Frame = -2

Query: 921 KSKRLKKDEP-MFKDIWPEMRLFANRLYEECYLNELNFLRKKEFDLCTLGNRNYREFLRF 745
           K K  ++D P +FK + P+M +F   LY+E Y N  +FL+    D     +   R+F+++
Sbjct: 16  KMKVGREDRPKVFKVLSPDMEMFITHLYKEGYFNNASFLKDVSLDFSFFHDSYGRDFIKY 75

Query: 744 AAEKFGRDHQEIAKWLSGSDLKKVALFGCPSVDKKSVFAAKKLRHFFNIQEDIVCRGCKL 565
           AAEKFG+DHQEIAKWLSGSDLKKVALFGCP++ +KSVF+AK+LR+FF IQE  VC  C L
Sbjct: 76  AAEKFGKDHQEIAKWLSGSDLKKVALFGCPTLMRKSVFSAKRLRNFFEIQEATVCNKCVL 135

Query: 564 NSSCKFVNKTAW-DKTSNLNLADALRTLTSYSLN-LTLQLAIPNEVKVSISKLLKEVVDL 391
             SC FVN++ W      LNLA  +R +T Y+L  +  +L++PNE+K S+++LL E++ L
Sbjct: 136 KHSCNFVNQSVWRGDIKTLNLAVVMRVITLYALEAVHPELSVPNEIKASVNRLLTEILKL 195

Query: 390 NQ 385
           +Q
Sbjct: 196 SQ 197


Top