BLASTX nr result
ID: Coptis25_contig00010663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010663
(1938 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana] ... 213 1e-73
ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arab... 204 1e-72
ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251... 194 1e-69
ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|2... 194 2e-69
ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265... 193 6e-69
>ref|NP_193341.3| uncharacterized protein [Arabidopsis thaliana]
gi|332658287|gb|AEE83687.1| uncharacterized protein
[Arabidopsis thaliana]
Length = 289
Score = 213 bits (541), Expect(2) = 1e-73
Identities = 118/175 (67%), Positives = 134/175 (76%), Gaps = 7/175 (4%)
Frame = +1
Query: 1267 STPTTQQFPSLKFKKSTHP---TISMASS----DGLQSISITKTWTQLNNKSDFASLLSS 1425
S P + F S K P T+S++SS D +SI +L ++SDF LLSS
Sbjct: 12 SLPFSFAFSSTPCKSRASPPRSTVSLSSSRRRQDRRRSIEAMSQVMELEDESDFEKLLSS 71
Query: 1426 DGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAAPIFFQRGIANAETQEI 1605
D ISI GFGSLLSE+SARSTFP+L NFRIAKL GFRRVFAH+APIFF+RGIAN ET+EI
Sbjct: 72 DNRISITGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAPIFFERGIANPETKEI 131
Query: 1606 SSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPETLEGRPFTNRAV 1770
SSLSVEPCEGESLVVTVFEIK SEIP+FI RE EFRFLAVVPETLEG+P+TN AV
Sbjct: 132 SSLSVEPCEGESLVVTVFEIKSSEIPAFIGRELEFRFLAVVPETLEGKPYTNSAV 186
Score = 92.4 bits (228), Expect(2) = 1e-73
Identities = 36/49 (73%), Positives = 45/49 (91%)
Frame = +2
Query: 1790 VLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 1936
VLCGRYSDEE+FQ+RCKG++ +YF+ YG++ I KIWRDDILPCR+YLRH
Sbjct: 186 VLCGRYSDEEFFQIRCKGNKGIYFQHYGRFKIDKIWRDDILPCRLYLRH 234
>ref|XP_002870187.1| hypothetical protein ARALYDRAFT_493280 [Arabidopsis lyrata subsp.
lyrata] gi|297316023|gb|EFH46446.1| hypothetical protein
ARALYDRAFT_493280 [Arabidopsis lyrata subsp. lyrata]
Length = 297
Score = 204 bits (519), Expect(2) = 1e-72
Identities = 103/129 (79%), Positives = 116/129 (89%)
Frame = +1
Query: 1384 QLNNKSDFASLLSSDGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAAPI 1563
+L ++SDF LLSSD ISI GFGSLLSE+SARSTFP+L NFRIAKL GFRRVFAH+API
Sbjct: 66 ELEDESDFEKLLSSDNRISIAGFGSLLSERSARSTFPDLENFRIAKLQGFRRVFAHSAPI 125
Query: 1564 FFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPETLE 1743
FF+ GIAN ET+EISSLSVEPCEGESLVVTVFEIK SEIP+FI+RE EFRFLAVVPET+E
Sbjct: 126 FFELGIANPETKEISSLSVEPCEGESLVVTVFEIKSSEIPAFIQRELEFRFLAVVPETME 185
Query: 1744 GRPFTNRAV 1770
G+P+TN AV
Sbjct: 186 GKPYTNSAV 194
Score = 97.8 bits (242), Expect(2) = 1e-72
Identities = 38/49 (77%), Positives = 47/49 (95%)
Frame = +2
Query: 1790 VLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 1936
VLCGRYSDEE+FQ+RCKG++E+YF+ YG++NI KIWRDDILPCR+YLRH
Sbjct: 194 VLCGRYSDEEFFQIRCKGNKEIYFQHYGRFNIEKIWRDDILPCRLYLRH 242
>ref|XP_002273099.1| PREDICTED: uncharacterized protein LOC100251759 [Vitis vinifera]
gi|296083318|emb|CBI22954.3| unnamed protein product
[Vitis vinifera]
Length = 248
Score = 194 bits (494), Expect(2) = 1e-69
Identities = 96/132 (72%), Positives = 114/132 (86%), Gaps = 3/132 (2%)
Frame = +1
Query: 1384 QLNNKSDFASLLSSDG---YISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHA 1554
+L ++SDF +LS DG +S+CGFGSLLSE+SARSTFP+L+NFR+A+LN FRRVFAH
Sbjct: 14 ELKDESDFEKVLSPDGGLGLLSVCGFGSLLSERSARSTFPDLMNFRVARLNSFRRVFAHV 73
Query: 1555 APIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPE 1734
APIFF+RGIA ET EISSLSVEPCEGE+L+VTVFEI+ SEIPSFI+REHEFRFLAV PE
Sbjct: 74 APIFFERGIAKPETMEISSLSVEPCEGETLIVTVFEIQRSEIPSFIKREHEFRFLAVFPE 133
Query: 1735 TLEGRPFTNRAV 1770
TL+G+ FT AV
Sbjct: 134 TLDGKLFTTPAV 145
Score = 97.4 bits (241), Expect(2) = 1e-69
Identities = 38/49 (77%), Positives = 47/49 (95%)
Frame = +2
Query: 1790 VLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 1936
VLC RYSDEE+FQ RCKGS+E+YF++YG++NIHKIWRDD+LPCR+YLRH
Sbjct: 145 VLCARYSDEEFFQNRCKGSKEIYFQQYGRHNIHKIWRDDVLPCRVYLRH 193
>ref|XP_002315483.1| predicted protein [Populus trichocarpa] gi|222864523|gb|EEF01654.1|
predicted protein [Populus trichocarpa]
Length = 245
Score = 194 bits (492), Expect(2) = 2e-69
Identities = 98/131 (74%), Positives = 114/131 (87%), Gaps = 2/131 (1%)
Frame = +1
Query: 1384 QLNNKSDFASLLSSDG--YISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAA 1557
+L + SDF S LSS IS+CGFGSLLSE+SARSTFP+L+NFR+A+LNGFRRVFAH A
Sbjct: 12 ELRDDSDFRSFLSSSDSDLISVCGFGSLLSERSARSTFPDLLNFRVARLNGFRRVFAHVA 71
Query: 1558 PIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPET 1737
PIFF+RGIA ET+EISSLSVEPCEGE LVVTVFEI++SEIP+F+ERE EFRFLAVVPET
Sbjct: 72 PIFFERGIAKPETKEISSLSVEPCEGEGLVVTVFEIEKSEIPAFMERELEFRFLAVVPET 131
Query: 1738 LEGRPFTNRAV 1770
L+G+PF AV
Sbjct: 132 LDGKPFDFPAV 142
Score = 97.8 bits (242), Expect(2) = 2e-69
Identities = 40/49 (81%), Positives = 46/49 (93%)
Frame = +2
Query: 1790 VLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 1936
VLC RYSDEE+FQVRCKGS+E+YF+ YG+YNI+KIWRDDILPCR YLRH
Sbjct: 142 VLCARYSDEEFFQVRCKGSKEIYFQHYGRYNINKIWRDDILPCRAYLRH 190
>ref|XP_002271042.1| PREDICTED: uncharacterized protein LOC100265416 [Vitis vinifera]
gi|296083319|emb|CBI22955.3| unnamed protein product
[Vitis vinifera]
Length = 308
Score = 193 bits (490), Expect(2) = 6e-69
Identities = 96/131 (73%), Positives = 113/131 (86%), Gaps = 1/131 (0%)
Frame = +1
Query: 1381 TQLNNKSDFASLLSS-DGYISICGFGSLLSEKSARSTFPELINFRIAKLNGFRRVFAHAA 1557
T+L+++SDF L SS D +SICGFGSLLSE+SARSTFP+LINFR+A+LNGFRRVFAH
Sbjct: 75 TELHDESDFERLASSNDDLLSICGFGSLLSERSARSTFPDLINFRVARLNGFRRVFAHVT 134
Query: 1558 PIFFQRGIANAETQEISSLSVEPCEGESLVVTVFEIKESEIPSFIEREHEFRFLAVVPET 1737
P+FF+RGIA ET EIS LSVEPCEGESL+VTVFEI SEIPS+I+RE E+RFLAV PET
Sbjct: 135 PVFFERGIAKPETMEISGLSVEPCEGESLIVTVFEIHRSEIPSYIKREIEYRFLAVFPET 194
Query: 1738 LEGRPFTNRAV 1770
L+G PFT+ AV
Sbjct: 195 LDGTPFTSPAV 205
Score = 96.7 bits (239), Expect(2) = 6e-69
Identities = 37/49 (75%), Positives = 46/49 (93%)
Frame = +2
Query: 1790 VLCGRYSDEEYFQVRCKGSREVYFERYGQYNIHKIWRDDILPCRIYLRH 1936
VLC RYSDEE+ Q+RCKGS+E++FE+YG+YNIHKIWRDD+ PCR+YLRH
Sbjct: 205 VLCARYSDEEFLQIRCKGSKEMFFEQYGRYNIHKIWRDDVFPCRVYLRH 253