BLASTX nr result
ID: Coptis25_contig00010659
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010659
(861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 428 e-118
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2... 424 e-116
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu... 394 e-107
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 378 e-103
ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus] 378 e-103
>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
Length = 5286
Score = 428 bits (1101), Expect = e-118
Identities = 204/288 (70%), Positives = 247/288 (85%), Gaps = 2/288 (0%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGGRKGLP+SFLNRFTKVYVDELV+DDY +IC+SL+PSI +P+LSKLILFNKRL+ D M+
Sbjct: 1813 GGGRKGLPRSFLNRFTKVYVDELVEDDYLFICSSLYPSIQRPILSKLILFNKRLHEDIML 1872
Query: 680 SHNYGREGSPWEFNLRDIIRSCQIIEGAPESSKEDVFLNTVYIQRMRTAADRQEVVKLYA 501
+H + ++GSPWEFNLRD+IRSC+IIEGAPE K D FLN VY+QRMRTAADR+EV++LY
Sbjct: 1873 NHKFAQDGSPWEFNLRDVIRSCEIIEGAPEKLKPDCFLNIVYVQRMRTAADRREVLRLYE 1932
Query: 500 EVFGVKPFINPYPRLQVNPRYLIVGNTVIERNRFQPSETLKSQLSILPGIRHSLESVAHC 321
+VF VKP+INPYPR+Q+N RYL+VGNT I RN FQ S+ SQL ILPGIR SLE+VAHC
Sbjct: 1933 QVFQVKPYINPYPRVQLNHRYLVVGNTSIRRNHFQSSKISNSQLKILPGIRQSLEAVAHC 1992
Query: 320 VQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCFEQYNAFRSFR 141
VQ QWLCILVGPS+SGK+S++RLLA TGNVLNEL+LSSATDISELLGCFEQYNAFR+FR
Sbjct: 1993 VQRQWLCILVGPSSSGKTSLIRLLAHSTGNVLNELSLSSATDISELLGCFEQYNAFRNFR 2052
Query: 140 SAITQVERYIDEYCGLSLE--LEAIVLERKDLVSKWFKLLSSMYGNPT 3
S + QVE Y++EYC L LE +EA + ER+D+++ W +LSSM P+
Sbjct: 2053 SVVGQVECYVNEYCSLQLESSMEAFISERRDMITGWLAVLSSMDCGPS 2100
Score = 60.5 bits (145), Expect = 5e-07
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Frame = -2
Query: 854 GRKGLPKSFLNRFTKVYVDELVDDD--YFYICNSLHPSIPK-PLLSKLILFNKRLYSDTM 684
G++ LP S +RFT+ +VD+++DD +I SL S L+ K++ F K ++
Sbjct: 922 GKRDLPYSLRSRFTEYFVDDVLDDKDLTLFITQSLDDSCSSGDLVDKIVSFYKAAKKESE 981
Query: 683 ISHNYGREGSPWEFNLRDIIRSCQIIEGAPESSKEDVFLNTVYIQRMRTAADRQEV--VK 510
G P +++LR + R+ IE ++ ++ F +Y +V K
Sbjct: 982 ERLQDGANQKP-QYSLRSLYRA---IEYTNKAKRKFGFQKAIYDGFSMFFLTLLDVPSAK 1037
Query: 509 LYAEVFGVKPFINPYPRLQVNPRYLIVGNTVIERNRFQPSETLKSQLSILPGIRHSLESV 330
L ++ K P YL+V + I + + KS +R L ++
Sbjct: 1038 LMNQMILSKVLGGKIPPQVPFDEYLMVRGSTISGDFLENYILTKS-------VREHLRNL 1090
Query: 329 AHCVQ-HQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCF 171
A V ++ +L GP++SGK+S+V+ LA +TG+ +N TD+ E LG +
Sbjct: 1091 ARAVLIKRYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHTDLQEYLGSY 1144
>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
predicted protein [Populus trichocarpa]
Length = 5317
Score = 424 bits (1091), Expect = e-116
Identities = 200/283 (70%), Positives = 241/283 (85%), Gaps = 2/283 (0%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGGRKGLPKSFLNRFTKVY+DELV+ DY ICNSL+PSIP+PLLSKLI+FNKRL+ DTM+
Sbjct: 1872 GGGRKGLPKSFLNRFTKVYIDELVEGDYLSICNSLYPSIPRPLLSKLIVFNKRLHEDTML 1931
Query: 680 SHNYGREGSPWEFNLRDIIRSCQIIEGAPESSKEDVFLNTVYIQRMRTAADRQEVVKLYA 501
H +G++GSPWEFNLRD+IRSCQIIEG PE K D FLN +Y+QRMRTAADR+EV+++Y
Sbjct: 1932 YHKFGQDGSPWEFNLRDVIRSCQIIEGVPEKLKVDCFLNILYVQRMRTAADRKEVLRIYE 1991
Query: 500 EVFGVKPFINPYPRLQVNPRYLIVGNTVIERNRFQPSETLKSQLSILPGIRHSLESVAHC 321
EVFGVKPFINP+PR+Q+N +YLIVGNTVI+RN + S+ S L+I+P IRHS+E+V HC
Sbjct: 1992 EVFGVKPFINPHPRVQLNSKYLIVGNTVIKRNISRSSKLSNSGLNIIPSIRHSMEAVVHC 2051
Query: 320 VQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCFEQYNAFRSFR 141
++HQWLCILVGP SGK+S++RLLA LTGNVLNEL+LS+ TDISELLGCFEQYNAFR+FR
Sbjct: 2052 IKHQWLCILVGPPCSGKTSLIRLLAQLTGNVLNELSLSTTTDISELLGCFEQYNAFRNFR 2111
Query: 140 SAITQVERYIDEYCGLSLELE--AIVLERKDLVSKWFKLLSSM 18
S I QVERY+ EYC L LE A + ER DL++KW LS+M
Sbjct: 2112 SVIAQVERYVSEYCNLQLEFSKVAFMSERTDLITKWLAFLSTM 2154
>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
gi|223539440|gb|EEF41030.1| ATP binding protein, putative
[Ricinus communis]
Length = 5282
Score = 394 bits (1012), Expect = e-107
Identities = 187/282 (66%), Positives = 231/282 (81%), Gaps = 1/282 (0%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGGRKGLPKSFLNRFTKVY+DELV++DY +I +SL+PSIP+P+LSKLILFNKRL+ DTM
Sbjct: 1798 GGGRKGLPKSFLNRFTKVYIDELVENDYLFISSSLYPSIPRPVLSKLILFNKRLHEDTMT 1857
Query: 680 SHNYGREGSPWEFNLRDIIRSCQIIEGAPESSKEDVFLNTVYIQRMRTAADRQEVVKLYA 501
+ +EGSPWEFNLRD+IRSC II+GAPE K D F++ +Y+QRMRT ADR+EV++LY
Sbjct: 1858 YRKFAQEGSPWEFNLRDVIRSCDIIQGAPEMLKLDGFVDILYVQRMRTPADRKEVLRLYQ 1917
Query: 500 EVFGVKPFINPYPRLQVNPRYLIVGNTVIERNRFQPSETLKSQLSILPGIRHSLESVAHC 321
EVFGVKP INPYPR+Q+N +YLIVGNT + RN + S+ +QL+ILP I HSLE+ HC
Sbjct: 1918 EVFGVKPLINPYPRVQLNTKYLIVGNTAVRRNSVRLSKFKSNQLNILPSILHSLEAAMHC 1977
Query: 320 VQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCFEQYNAFRSFR 141
+QHQWLCILVGP +SGK+S++RL+A+LTGNVLNELNLSS TDISELLGCFEQY+A R+FR
Sbjct: 1978 LQHQWLCILVGPPSSGKTSLIRLVAELTGNVLNELNLSSVTDISELLGCFEQYDACRNFR 2037
Query: 140 SAITQVERYIDEYCGLSLELEAIVL-ERKDLVSKWFKLLSSM 18
S V+RY+ EYC L LE + ER+DL++KW S M
Sbjct: 2038 SICAHVKRYVAEYCSLLLEFSKVTFCERRDLIAKWLAFSSRM 2079
Score = 57.0 bits (136), Expect = 5e-06
Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 25/232 (10%)
Frame = -2
Query: 788 DDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMISH-------NYGREGSPWEFNLRD 630
+DD I + +P++ +PL KLI +R+ S + H ++ GS F++RD
Sbjct: 504 NDDLHNIVKARYPNL-EPLARKLIGTFERVNS-VCLHHILEFQTGSFTLSGSQSRFSIRD 561
Query: 629 IIRSCQIIEG---APESSKEDVFLNTVYIQRMRTAAD-------RQEVVKLYAEVFGVKP 480
+++ C+ I G P +Y + + A R ++K ++ + P
Sbjct: 562 LLKWCKRIAGLGYCPTDVLTAYECRCIYQEAIDIFAAFSASTEIRLAIMKDITNLWMIPP 621
Query: 479 ----FINPY-PRLQVNPRYLIVGNTVIERNRFQ---PSETLKSQLSILPGIRHSLESVAH 324
+ PY P +Q L +G ++R P + +K + S+ H LE ++
Sbjct: 622 SEAGILYPYKPEIQGFLAELKIGRVTVQRQETALHGPEKLVKMRSSL-----HVLERISC 676
Query: 323 CVQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCFE 168
V++ +LVG + +GK+++++ LA + G L LNLS +D+++LLG F+
Sbjct: 677 SVKYNEPVLLVGETGTGKTTLIQNLAMMLGQRLTVLNLSQQSDVADLLGGFK 728
>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
Length = 5431
Score = 378 bits (971), Expect = e-103
Identities = 181/283 (63%), Positives = 223/283 (78%), Gaps = 2/283 (0%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGGRKGLPKSFLNRFTKVY+DEL++DDY +IC+SL+ SIPKPLLSKLILFNKRL+ + M+
Sbjct: 1954 GGGRKGLPKSFLNRFTKVYLDELIEDDYLFICSSLYESIPKPLLSKLILFNKRLHEEVML 2013
Query: 680 SHNYGREGSPWEFNLRDIIRSCQIIEGAPESSKEDVFLNTVYIQRMRTAADRQEVVKLYA 501
+ ++GSPWEFNLRD++RSCQIIEGAPE + FLN VY+QRMRTA DR+EV++LY
Sbjct: 2014 HKKFAQDGSPWEFNLRDVLRSCQIIEGAPERLRSYCFLNIVYVQRMRTAGDRREVLRLYE 2073
Query: 500 EVFGVKPFINPYPRLQVNPRYLIVGNTVIERNRFQPSETLKSQLSILPGIRHSLESVAHC 321
EVFG K INPYPR+Q+N R+LIVGN I RN Q SQL ILPGIR SLE+VAHC
Sbjct: 2074 EVFGAKYLINPYPRVQLNSRFLIVGNIAIGRNSIQACNVASSQLKILPGIRQSLEAVAHC 2133
Query: 320 VQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCFEQYNAFRSFR 141
+Q+QW+CILVGPS+SGK+S+VRLLA LTGNVLNELNLSS TDISELLGCFEQY+A R+F
Sbjct: 2134 IQYQWMCILVGPSSSGKTSLVRLLAQLTGNVLNELNLSSTTDISELLGCFEQYDAIRNFH 2193
Query: 140 SAITQVERYIDEYCGLSLELEAIVLERKD--LVSKWFKLLSSM 18
I QV ++++YC + + +R +++KW S +
Sbjct: 2194 HVIDQVGFHVNKYCSVQIRCSKKEFDRDGNCIMTKWLSFSSKI 2236
Score = 57.8 bits (138), Expect = 3e-06
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 22/302 (7%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGG G+ + KV + ++D I + +P I + + SKL+ +++ S +
Sbjct: 521 GGGTIGM------LWRKVMIGSPNNEDMQSIVKTQYP-ILESIASKLVETLEKVNSCSQQ 573
Query: 680 SHNYGREGS-----PWEFNLRDIIRSCQIIEGAPESSKEDVF----LNTVYIQRMRTAAD 528
+ E S P F+LRD+++ C+ I G S D F ++Y + + A
Sbjct: 574 LLGFRCEESASVSYPNRFSLRDLLKWCKRIVGLGFSFMGDGFSAYQCQSIYHEAIDIFAA 633
Query: 527 -----------RQEVVKLYAEVFGVKPFINPY--PRLQVNPRYLIVGNTVIERNRFQPSE 387
+E+ KL+ V + P P +Q L VG I+R +
Sbjct: 634 FSTSPENRLTIMKEIAKLWLGDASVPGTLYPQYKPVIQDLITELRVGRVDIQRVQPTSKH 693
Query: 386 TLKSQLSILPGIRHSLESVAHCVQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLS 207
++ + I + H LE +A +++ +LVG + +GK+++V+ LA G+ LNLS
Sbjct: 694 VVQPFVEIRSSL-HMLERIACSIKYNEPVLLVGETGTGKTTLVQSLARRIGHNFTVLNLS 752
Query: 206 SATDISELLGCFEQYNAFRSFRSAITQVERYIDEYCGLSLELEAIVLERKDLVSKWFKLL 27
+D+++LLG F+ +A S + E + L + +E + +K K +K+L
Sbjct: 753 QQSDVADLLGGFKPIDARFICFSLYKEFEDLFSKTFSLKVNVEFLAHLQKHFGDKNWKML 812
Query: 26 SS 21
S
Sbjct: 813 LS 814
>ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]
Length = 5062
Score = 378 bits (971), Expect = e-103
Identities = 181/283 (63%), Positives = 223/283 (78%), Gaps = 2/283 (0%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGGRKGLPKSFLNRFTKVY+DEL++DDY +IC+SL+ SIPKPLLSKLILFNKRL+ + M+
Sbjct: 1556 GGGRKGLPKSFLNRFTKVYLDELIEDDYLFICSSLYESIPKPLLSKLILFNKRLHEEVML 1615
Query: 680 SHNYGREGSPWEFNLRDIIRSCQIIEGAPESSKEDVFLNTVYIQRMRTAADRQEVVKLYA 501
+ ++GSPWEFNLRD++RSCQIIEGAPE + FLN VY+QRMRTA DR+EV++LY
Sbjct: 1616 HKKFAQDGSPWEFNLRDVLRSCQIIEGAPERLRSYCFLNIVYVQRMRTAGDRREVLRLYE 1675
Query: 500 EVFGVKPFINPYPRLQVNPRYLIVGNTVIERNRFQPSETLKSQLSILPGIRHSLESVAHC 321
EVFG K INPYPR+Q+N R+LIVGN I RN Q SQL ILPGIR SLE+VAHC
Sbjct: 1676 EVFGAKYLINPYPRVQLNSRFLIVGNIAIGRNSIQACNVASSQLKILPGIRQSLEAVAHC 1735
Query: 320 VQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLSSATDISELLGCFEQYNAFRSFR 141
+Q+QW+CILVGPS+SGK+S+VRLLA LTGNVLNELNLSS TDISELLGCFEQY+A R+F
Sbjct: 1736 IQYQWMCILVGPSSSGKTSLVRLLAQLTGNVLNELNLSSTTDISELLGCFEQYDAIRNFH 1795
Query: 140 SAITQVERYIDEYCGLSLELEAIVLERKD--LVSKWFKLLSSM 18
I QV ++++YC + + +R +++KW S +
Sbjct: 1796 HVIDQVGFHVNKYCSVQIRCSKKEFDRDGNCIMTKWLSFSSKI 1838
Score = 58.5 bits (140), Expect = 2e-06
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 22/302 (7%)
Frame = -2
Query: 860 GGGRKGLPKSFLNRFTKVYVDELVDDDYFYICNSLHPSIPKPLLSKLILFNKRLYSDTMI 681
GGG G+ + KV + ++D I + +P I + + SKL+ +++ S +
Sbjct: 99 GGGTIGM------LWRKVMIGSPNNEDMQSIVKTQYP-ILESIASKLVETLEKVNSCSQQ 151
Query: 680 SHNYGREGS-----PWEFNLRDIIRSCQIIEGAPESSKEDVF----LNTVYIQRMRTAAD 528
+ E S P F+LRD+++ C+ I G S D F ++Y + + A
Sbjct: 152 LLGFRCEESASVSYPNRFSLRDLLKWCKRIVGLGFSFMGDGFSAYQCQSIYHEAIDIFAA 211
Query: 527 -----------RQEVVKLYAEVFGVKPFINPY--PRLQVNPRYLIVGNTVIERNRFQPSE 387
+E+ KL+ V + P P +Q L VG I+R +
Sbjct: 212 FSTSPENRLTIMKEIAKLWLGDASVPGTLYPQYKPAIQDLITELRVGRVDIQRVQPTSKH 271
Query: 386 TLKSQLSILPGIRHSLESVAHCVQHQWLCILVGPSASGKSSVVRLLADLTGNVLNELNLS 207
++ + I + H LE +A +++ +LVG + +GK+++V+ LA G+ LNLS
Sbjct: 272 VVQPFVEIRSSL-HMLERIACSIKYNEPVLLVGETGTGKTTLVQSLARRIGHNFTVLNLS 330
Query: 206 SATDISELLGCFEQYNAFRSFRSAITQVERYIDEYCGLSLELEAIVLERKDLVSKWFKLL 27
+D+++LLG F+ +A S + E + L + +E + +K K +K+L
Sbjct: 331 QQSDVADLLGGFKPIDARFICFSLYKEFEDLFSKTFSLKVNVEFLAHLQKHFGDKNWKML 390
Query: 26 SS 21
S
Sbjct: 391 LS 392