BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010658
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278469.1| PREDICTED: WD repeat-containing protein LWD1...   666   0.0  
ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1...   664   0.0  
ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1...   661   0.0  
ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1...   660   0.0  
ref|XP_002334240.1| predicted protein [Populus trichocarpa] gi|2...   660   0.0  

>ref|XP_002278469.1| PREDICTED: WD repeat-containing protein LWD1 isoform 1 [Vitis
            vinifera] gi|359488412|ref|XP_003633757.1| PREDICTED: WD
            repeat-containing protein LWD1 isoform 2 [Vitis vinifera]
            gi|113707436|gb|ABF66626.2| WD repeat 2 [Vitis vinifera]
          Length = 344

 Score =  666 bits (1718), Expect = 0.0
 Identities = 322/342 (94%), Positives = 334/342 (97%)
 Frame = -2

Query: 1169 SNSDPIQNGSEEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQHQNRVEIVQ 990
            ++SDP Q+ S+EQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQ+ NRVEIVQ
Sbjct: 3    ASSDPTQDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQ 62

Query: 989  LDDSTGEIRSDPKLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRIWNISDDTVQLKS 810
            LDDSTGEIRSDP LSFEH YPPTKTIFIPDK+CQKPDLLATS DFLR+WNISDD V+LK 
Sbjct: 63   LDDSTGEIRSDPNLSFEHHYPPTKTIFIPDKDCQKPDLLATSSDFLRVWNISDDRVELKC 122

Query: 809  LLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDI 630
            LLNGN+NSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEV+DI
Sbjct: 123  LLNGNRNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVFDI 182

Query: 629  AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD 450
            AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD
Sbjct: 183  AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD 242

Query: 449  SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV 270
            SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV
Sbjct: 243  SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV 302

Query: 269  EGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQILRV 144
            EGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQILRV
Sbjct: 303  EGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 344


>ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1-like [Cucumis sativus]
            gi|449501305|ref|XP_004161333.1| PREDICTED: WD
            repeat-containing protein LWD1-like [Cucumis sativus]
          Length = 346

 Score =  664 bits (1713), Expect = 0.0
 Identities = 323/344 (93%), Positives = 336/344 (97%), Gaps = 2/344 (0%)
 Frame = -2

Query: 1169 SNSDPIQNGSEEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQHQNRVEIVQ 990
            ++SDP Q+ S+EQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQ+ NRVEIVQ
Sbjct: 3    ASSDPNQDASDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQ 62

Query: 989  LDDSTGEIRSDPKLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRIWNISDD--TVQL 816
            LDDS+GEIRSDP LSFEHPYPPTKTIFIPDKECQ+PDLLATS DFLR+W ISDD  +V+L
Sbjct: 63   LDDSSGEIRSDPNLSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDDPSSVEL 122

Query: 815  KSLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVY 636
            KSLLNGNKNSEFCGPLTSFDWN+AEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVY
Sbjct: 123  KSLLNGNKNSEFCGPLTSFDWNDAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVY 182

Query: 635  DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 456
            DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII
Sbjct: 183  DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 242

Query: 455  MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQ 276
            MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQ
Sbjct: 243  MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQ 302

Query: 275  PVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQILRV 144
            PVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQILRV
Sbjct: 303  PVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346


>ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  661 bits (1705), Expect = 0.0
 Identities = 316/342 (92%), Positives = 335/342 (97%)
 Frame = -2

Query: 1169 SNSDPIQNGSEEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQHQNRVEIVQ 990
            ++SDP Q+GS+EQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQ+ NRVEIVQ
Sbjct: 3    ASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQ 62

Query: 989  LDDSTGEIRSDPKLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRIWNISDDTVQLKS 810
            LDDS GEIRSDP LSFEHPYPPTK+IFIPDK+C +PDLLATS DFLR+W+IS+ +V+LKS
Sbjct: 63   LDDSNGEIRSDPSLSFEHPYPPTKSIFIPDKDCHRPDLLATSSDFLRVWHISESSVELKS 122

Query: 809  LLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDI 630
            LLNGNKNSE+CGPLTSFDWNEAEP+RIGTSSIDTTCTIWDIE+ETVDTQLIAHDKEVYDI
Sbjct: 123  LLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDI 182

Query: 629  AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD 450
            AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD
Sbjct: 183  AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD 242

Query: 449  SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV 270
            SAKVVVLDIRFPTLPVVELQRHQASVNA+AWAPHSSCHICTAGDDSQALIWDLSSMGQPV
Sbjct: 243  SAKVVVLDIRFPTLPVVELQRHQASVNAVAWAPHSSCHICTAGDDSQALIWDLSSMGQPV 302

Query: 269  EGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQILRV 144
            EGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQILRV
Sbjct: 303  EGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 344


>ref|XP_003548808.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  660 bits (1704), Expect = 0.0
 Identities = 317/342 (92%), Positives = 333/342 (97%)
 Frame = -2

Query: 1169 SNSDPIQNGSEEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQHQNRVEIVQ 990
            ++SDP Q+GS+EQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQ+ NRVEIVQ
Sbjct: 3    ASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQ 62

Query: 989  LDDSTGEIRSDPKLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRIWNISDDTVQLKS 810
            LDDS GEIRSDP LSFEHPYPPTK IFIPDK+C +PDLLATS DFLR+W+IS+  V+LKS
Sbjct: 63   LDDSNGEIRSDPSLSFEHPYPPTKAIFIPDKDCHRPDLLATSSDFLRVWHISESAVELKS 122

Query: 809  LLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVYDI 630
            LLNGNKNSE+CGPLTSFDWNEAEP+RIGTSSIDTTCTIWDIE+ETVDTQLIAHDKEVYDI
Sbjct: 123  LLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYDI 182

Query: 629  AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD 450
            AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD
Sbjct: 183  AWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMD 242

Query: 449  SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV 270
            SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV
Sbjct: 243  SAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPV 302

Query: 269  EGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQILRV 144
            EGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQILRV
Sbjct: 303  EGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 344


>ref|XP_002334240.1| predicted protein [Populus trichocarpa]
            gi|224131364|ref|XP_002321066.1| predicted protein
            [Populus trichocarpa] gi|222861839|gb|EEE99381.1|
            predicted protein [Populus trichocarpa]
            gi|222870324|gb|EEF07455.1| predicted protein [Populus
            trichocarpa]
          Length = 346

 Score =  660 bits (1703), Expect = 0.0
 Identities = 320/344 (93%), Positives = 334/344 (97%), Gaps = 2/344 (0%)
 Frame = -2

Query: 1169 SNSDPIQNGSEEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQHQNRVEIVQ 990
            ++SDP Q+GS+EQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQ+ NRVEIVQ
Sbjct: 3    ASSDPNQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQ 62

Query: 989  LDDSTGEIRSDPKLSFEHPYPPTKTIFIPDKECQKPDLLATSGDFLRIWNISDDT--VQL 816
            LDDS GEIRSDP LSFEHPYPPTKTIFIPDKECQKPDLLATS DFLR+W I+D+   V+L
Sbjct: 63   LDDSNGEIRSDPNLSFEHPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRINDEQPRVEL 122

Query: 815  KSLLNGNKNSEFCGPLTSFDWNEAEPKRIGTSSIDTTCTIWDIERETVDTQLIAHDKEVY 636
            KSLLNGNKNSEFCGPLTSFDWNEAEP+RIGTSSIDTTCTIWDIE+ETVDTQLIAHDKEVY
Sbjct: 123  KSLLNGNKNSEFCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVY 182

Query: 635  DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 456
            DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII
Sbjct: 183  DIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATII 242

Query: 455  MDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQ 276
            MDSAKVVVLDIRFPTLPVVELQRH ASVNA+AWAPHSSCHICTAGDDSQALIWDLSSMGQ
Sbjct: 243  MDSAKVVVLDIRFPTLPVVELQRHHASVNAVAWAPHSSCHICTAGDDSQALIWDLSSMGQ 302

Query: 275  PVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQILRV 144
            PVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQILRV
Sbjct: 303  PVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346