BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010655
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|2...   319   3e-85
ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus...   311   5e-83
gb|ACU18910.1| unknown [Glycine max]                                  308   8e-82
ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homol...   307   1e-81
ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homol...   306   2e-81

>ref|XP_002313577.1| predicted protein [Populus trichocarpa] gi|222849985|gb|EEE87532.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  319 bits (818), Expect = 3e-85
 Identities = 164/220 (74%), Positives = 183/220 (83%), Gaps = 2/220 (0%)
 Frame = -2

Query: 656 LVTLHQTVIPHLSSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYA 477
           L  LHQ VIPHLS+PIMLCDFLTRSYD+GGV SVMALSSL+ILMT+HGLEYPNFYEKLY 
Sbjct: 299 LSNLHQAVIPHLSNPIMLCDFLTRSYDIGGVVSVMALSSLFILMTKHGLEYPNFYEKLYV 358

Query: 476 LLEPSIFMAKHRAKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIH 297
           LL PSIFMAKHRAKFF+LLDSCLKSPLLPAYLAAAF KKLSRL+LVVPPSGALV+IA+IH
Sbjct: 359 LLLPSIFMAKHRAKFFQLLDSCLKSPLLPAYLAAAFAKKLSRLALVVPPSGALVIIALIH 418

Query: 296 NLLRRHPSINFLVQQQ--NDETDGDXXXXXXXXXXSVKESDACTDISTAKPGIDMFNSEE 123
           NLLRRHPSIN LV Q+  ND TD +             E  A T+I+  K GID F++EE
Sbjct: 419 NLLRRHPSINCLVHQEDCNDTTDNNSEAEGGDNE---NEFGASTNIAARKAGIDHFDNEE 475

Query: 122 TDPAKSNAMRSSLWEIDTLRHHYCPAVSRFVASLENDLTV 3
           ++P KS+A+ SSLWEID+LRHHYCP VSRFV SLENDLTV
Sbjct: 476 SNPLKSHALGSSLWEIDSLRHHYCPPVSRFVQSLENDLTV 515


>ref|XP_002531130.1| nucleolar complex protein, putative [Ricinus communis]
            gi|223529279|gb|EEF31250.1| nucleolar complex protein,
            putative [Ricinus communis]
          Length = 652

 Score =  311 bits (798), Expect = 5e-83
 Identities = 154/219 (70%), Positives = 179/219 (81%), Gaps = 1/219 (0%)
 Frame = -2

Query: 656  LVTLHQTVIPHLSSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYA 477
            L++LHQ VIP++S+P+MLCDFLTRSYD+GGV SVMALSSL+ILMTQHGLEYPNFYEKLYA
Sbjct: 345  LISLHQAVIPYISNPLMLCDFLTRSYDIGGVVSVMALSSLFILMTQHGLEYPNFYEKLYA 404

Query: 476  LLEPSIFMAKHRAKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIH 297
            LL PS+FMAKHR+KFF+LLDSCLKSPLLPAYLAAAF K+LSRL+L  PPSG +V+IA+IH
Sbjct: 405  LLLPSVFMAKHRSKFFQLLDSCLKSPLLPAYLAAAFAKRLSRLALTAPPSGGVVIIALIH 464

Query: 296  NLLRRHPSINFLVQQQN-DETDGDXXXXXXXXXXSVKESDACTDISTAKPGIDMFNSEET 120
            NLLRRHPSIN LV +++ +E+  D              S   +  S  KPGID FN+EE 
Sbjct: 465  NLLRRHPSINCLVHREDGNESAADNSKAKGEDAGDANNSRNGSHASARKPGIDRFNNEEC 524

Query: 119  DPAKSNAMRSSLWEIDTLRHHYCPAVSRFVASLENDLTV 3
             P KS+A+RSSLWEIDTL HHYCP VSRFV SLENDLTV
Sbjct: 525  SPIKSSALRSSLWEIDTLSHHYCPPVSRFVLSLENDLTV 563


>gb|ACU18910.1| unknown [Glycine max]
          Length = 253

 Score =  308 bits (788), Expect = 8e-82
 Identities = 154/218 (70%), Positives = 175/218 (80%)
 Frame = -2

Query: 656 LVTLHQTVIPHLSSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYA 477
           LV LHQ VIPHLS+PIMLCDFLTRSYDVGGV SVMALSSL++LMTQ+GLEYPNFYEKLYA
Sbjct: 26  LVNLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYA 85

Query: 476 LLEPSIFMAKHRAKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIH 297
           LL PSIFMAKHRA+FF+LLDSCLKSPLLPAYLAA+F KKLSRL L VPPSGALV+ A+IH
Sbjct: 86  LLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIH 145

Query: 296 NLLRRHPSINFLVQQQNDETDGDXXXXXXXXXXSVKESDACTDISTAKPGIDMFNSEETD 117
           N+LRRHPSIN LV +++   +G           +  ++     + + K GID FNS ETD
Sbjct: 146 NILRRHPSINCLVHREDGVDEGKGDHRTDEGMATNSDNAKTVAMPSQKSGIDHFNSSETD 205

Query: 116 PAKSNAMRSSLWEIDTLRHHYCPAVSRFVASLENDLTV 3
           P KS+AMRSSLWEIDT+ HHYCP  SRF  SL NDLTV
Sbjct: 206 PKKSDAMRSSLWEIDTILHHYCPPASRFALSLGNDLTV 243


>ref|XP_003544990.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 600

 Score =  307 bits (787), Expect = 1e-81
 Identities = 154/218 (70%), Positives = 174/218 (79%)
 Frame = -2

Query: 656 LVTLHQTVIPHLSSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYA 477
           LV LHQ VIPHLS+PIMLCDFLTRSYDVGGV SVMALSSL++LMTQ+GLEYPNFYEKLYA
Sbjct: 308 LVNLHQAVIPHLSNPIMLCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYEKLYA 367

Query: 476 LLEPSIFMAKHRAKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIH 297
           LL PSIFMAKHRA+FF+LLDSCLKSPLLPAYLAA+F KKLSRL L VPPSGALV+ A+IH
Sbjct: 368 LLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIH 427

Query: 296 NLLRRHPSINFLVQQQNDETDGDXXXXXXXXXXSVKESDACTDISTAKPGIDMFNSEETD 117
           N+LRRHPSIN LV +++   +G           +  ++     + + K GID FNS ETD
Sbjct: 428 NILRRHPSINCLVHREDGVDEGKGDHRTDEGMATNSDNAKTVAMPSQKSGIDHFNSSETD 487

Query: 116 PAKSNAMRSSLWEIDTLRHHYCPAVSRFVASLENDLTV 3
           P KS AMRSSLWEIDT+ HHYCP  SRF  SL NDLTV
Sbjct: 488 PKKSGAMRSSLWEIDTILHHYCPPASRFALSLGNDLTV 525


>ref|XP_003519333.1| PREDICTED: nucleolar complex protein 4 homolog [Glycine max]
          Length = 581

 Score =  306 bits (785), Expect = 2e-81
 Identities = 158/220 (71%), Positives = 177/220 (80%), Gaps = 2/220 (0%)
 Frame = -2

Query: 656 LVTLHQTVIPHLSSPIMLCDFLTRSYDVGGVTSVMALSSLYILMTQHGLEYPNFYEKLYA 477
           LV LHQ VIPHLS+PI+LCDFLTRSYDVGGV SVMALSSL++LMTQ+GLEYPNFY+KLYA
Sbjct: 299 LVCLHQAVIPHLSNPIILCDFLTRSYDVGGVVSVMALSSLFVLMTQYGLEYPNFYDKLYA 358

Query: 476 LLEPSIFMAKHRAKFFELLDSCLKSPLLPAYLAAAFTKKLSRLSLVVPPSGALVVIAIIH 297
           LL PSIFMAKHRA+FF+LLDSCLKSPLLPAYLAA+F KKLSRL L VPPSGALV+ A+IH
Sbjct: 359 LLVPSIFMAKHRARFFQLLDSCLKSPLLPAYLAASFAKKLSRLLLSVPPSGALVITALIH 418

Query: 296 NLLRRHPSINFLVQQQN--DETDGDXXXXXXXXXXSVKESDACTDISTAKPGIDMFNSEE 123
           NLLRRHPSIN LV +++  DE  GD          +    +A T + + K GID FNS E
Sbjct: 419 NLLRRHPSINCLVHREDGVDEGKGD-------EGMATNSDNAKTAMPSQKSGIDHFNSSE 471

Query: 122 TDPAKSNAMRSSLWEIDTLRHHYCPAVSRFVASLENDLTV 3
           TDP KS AMRSSLWEIDT+ HHYCP  SRF  SL NDLTV
Sbjct: 472 TDPKKSGAMRSSLWEIDTILHHYCPPASRFALSLGNDLTV 511