BLASTX nr result

ID: Coptis25_contig00010649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010649
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257...   348   5e-94
emb|CBI15004.3| unnamed protein product [Vitis vinifera]              342   5e-92
ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|2...   325   8e-87
ref|XP_002511375.1| conserved hypothetical protein [Ricinus comm...   323   2e-86
ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|2...   323   2e-86

>ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera]
          Length = 1087

 Score =  348 bits (894), Expect = 5e-94
 Identities = 179/247 (72%), Positives = 203/247 (82%)
 Frame = +1

Query: 1   VNACNLLVYGPGQVIPSTMKVLQSELKFSLLVGLSSTVQYGRVVLVMDKNFCTDSAGNSF 180
           VNACNLLVYG GQVIPST  VLQ  LKFS+LVGLS +V YGRV+LVMDK+FC DSA N F
Sbjct: 140 VNACNLLVYGAGQVIPSTFNVLQPNLKFSVLVGLSYSVPYGRVILVMDKSFCADSARNKF 199

Query: 181 RRTANSSFFVHFDRRSVFVNLRTHIPEKLLQLNRETRTVEATNNLRNLKVYLYFSEPVLN 360
            RT NSS  VHFD RSVFVNLRTH+PEKLL+LN ETRTV+ATNN +NLKVYLYFSEPVLN
Sbjct: 200 MRTENSSLLVHFDIRSVFVNLRTHVPEKLLELNSETRTVQATNNYKNLKVYLYFSEPVLN 259

Query: 361 SSLEIMNSLHTSEGLLILRDGKTKGNRRFGFLVTNISSIAIVTISFNSSSIISRQGTAVS 540
           SS E+++SL+TS+G+L+   G++ GNRRFGFLV N+SS+AIVTISF+SS+IISRQGT VS
Sbjct: 260 SSTEVLSSLNTSQGVLLPNGGRSLGNRRFGFLVENVSSVAIVTISFDSSAIISRQGTPVS 319

Query: 541 PIAPVTFIYDSQRPSVRLSTTSAMRTREHXXXXXXXXXXXXXGFNSSTLSISGGHLQRFL 720
           PIAPVTF+YDSQRP VRLSTTS MRTREH             GFNSS +SISGG LQ F 
Sbjct: 320 PIAPVTFLYDSQRPIVRLSTTSNMRTREHTIPILIKFLKPVFGFNSSHISISGGQLQSFN 379

Query: 721 EMSRSIY 741
            +SRSIY
Sbjct: 380 AISRSIY 386


>emb|CBI15004.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  342 bits (877), Expect = 5e-92
 Identities = 180/259 (69%), Positives = 204/259 (78%), Gaps = 12/259 (4%)
 Frame = +1

Query: 1    VNACNLLVYGPGQVIPSTMKVLQSELKFSLLVGLSSTVQYGRVVLVMDKNFCTDSAGNSF 180
            VNACNLLVYG GQVIPST  VLQ  LKFS+LVGLS +V YGRV+LVMDK+FC DSA N F
Sbjct: 485  VNACNLLVYGAGQVIPSTFNVLQPNLKFSVLVGLSYSVPYGRVILVMDKSFCADSARNKF 544

Query: 181  RRTANSSFFVHFDRRSVFVNLRTHIPEKLLQLNRETRTVEATNNLRNLKVYLYFSEPVLN 360
             RT NSS  VHFD RSVFVNLRTH+PEKLL+LN ETRTV+ATNN +NLKVYLYFSEPVLN
Sbjct: 545  MRTENSSLLVHFDIRSVFVNLRTHVPEKLLELNSETRTVQATNNYKNLKVYLYFSEPVLN 604

Query: 361  SSLEIMNSLHTSEGLLILRDGKTKGNRRFGFLVTNISSIAIVTISFNSSSIISRQGTAVS 540
            SS E+++SL+TS+G+L+   G++ GNRRFGFLV N+SS+AIVTISF+SS+IISRQGT VS
Sbjct: 605  SSTEVLSSLNTSQGVLLPNGGRSLGNRRFGFLVENVSSVAIVTISFDSSAIISRQGTPVS 664

Query: 541  PIAPVTFIYDSQRPSVRLSTTSAMRTREHXXXXXXXXXXXXXGFNSSTLSISGGHLQR-- 714
            PIAPVTF+YDSQRP VRLSTTS MRTREH             GFNSS +SISGG LQR  
Sbjct: 665  PIAPVTFLYDSQRPIVRLSTTSNMRTREHTIPILIKFLKPVFGFNSSHISISGGQLQRQV 724

Query: 715  ----------FLEMSRSIY 741
                      F  +SRSIY
Sbjct: 725  ISCSQTQAYIFNAISRSIY 743


>ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|222869169|gb|EEF06300.1|
           predicted protein [Populus trichocarpa]
          Length = 937

 Score =  325 bits (832), Expect = 8e-87
 Identities = 167/244 (68%), Positives = 197/244 (80%)
 Frame = +1

Query: 13  NLLVYGPGQVIPSTMKVLQSELKFSLLVGLSSTVQYGRVVLVMDKNFCTDSAGNSFRRTA 192
           +LLVYG GQVIPS++ VL+  LK++LLVGLS +V YGRV+LVMDKNFCTD+AGN F R A
Sbjct: 17  HLLVYGAGQVIPSSLTVLEPNLKYTLLVGLSPSVLYGRVILVMDKNFCTDTAGNRFTRAA 76

Query: 193 NSSFFVHFDRRSVFVNLRTHIPEKLLQLNRETRTVEATNNLRNLKVYLYFSEPVLNSSLE 372
           NSSFFVHFDRRSVFV+LR HIPEKLLQLN E RTV+ATNN  NLK Y+YFSEP+LNSS E
Sbjct: 77  NSSFFVHFDRRSVFVDLRIHIPEKLLQLNNEIRTVKATNNDDNLKFYMYFSEPILNSSAE 136

Query: 373 IMNSLHTSEGLLILRDGKTKGNRRFGFLVTNISSIAIVTISFNSSSIISRQGTAVSPIAP 552
           I+NSL+TS+G+L+   G+  GNR+FGF V N+SSIA+VTI   S+SIISR GT+VSPIAP
Sbjct: 137 ILNSLNTSQGVLLPISGENLGNRKFGFQVANLSSIAVVTIGLLSNSIISRPGTSVSPIAP 196

Query: 553 VTFIYDSQRPSVRLSTTSAMRTREHXXXXXXXXXXXXXGFNSSTLSISGGHLQRFLEMSR 732
           VTF+YDSQRP+VRL T+S  RT+EH             GFNSS LSISGGHLQ F E+SR
Sbjct: 197 VTFLYDSQRPAVRLRTSSNTRTKEHSIPISIKFVKPVFGFNSSFLSISGGHLQGFHEISR 256

Query: 733 SIYM 744
           S Y+
Sbjct: 257 SKYI 260


>ref|XP_002511375.1| conserved hypothetical protein [Ricinus communis]
           gi|223550490|gb|EEF51977.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1087

 Score =  323 bits (829), Expect = 2e-86
 Identities = 163/248 (65%), Positives = 200/248 (80%)
 Frame = +1

Query: 1   VNACNLLVYGPGQVIPSTMKVLQSELKFSLLVGLSSTVQYGRVVLVMDKNFCTDSAGNSF 180
           VN CNLLVYG GQVI S++  ++ +L++SLLV LS TVQYGRV+LVMD+NFCTD+AGNSF
Sbjct: 157 VNDCNLLVYGAGQVISSSLTTVEPDLRYSLLVDLSPTVQYGRVILVMDRNFCTDTAGNSF 216

Query: 181 RRTANSSFFVHFDRRSVFVNLRTHIPEKLLQLNRETRTVEATNNLRNLKVYLYFSEPVLN 360
            R ANSSF+VHFDRRSVFV+ R HIPEKLLQL+ +TRTV+ATN+   L+VYLYFS+PV+N
Sbjct: 217 TRAANSSFYVHFDRRSVFVDQRIHIPEKLLQLDNQTRTVQATNDYDKLRVYLYFSQPVVN 276

Query: 361 SSLEIMNSLHTSEGLLILRDGKTKGNRRFGFLVTNISSIAIVTISFNSSSIISRQGTAVS 540
           SS +I++SL+ SEG L+  +G+  GNRRFGF V N+S+IAI+TI  NSSSIISR GT++S
Sbjct: 277 SSAQILDSLNISEGELLPINGENLGNRRFGFQVANVSTIAIITIGLNSSSIISRSGTSIS 336

Query: 541 PIAPVTFIYDSQRPSVRLSTTSAMRTREHXXXXXXXXXXXXXGFNSSTLSISGGHLQRFL 720
           PIAPVTF+YDSQRP+V LST S  RT+EH             GFNSS+LSISGGHLQ F 
Sbjct: 337 PIAPVTFLYDSQRPAVGLSTMSTSRTKEHSIPVSINFMKPVFGFNSSSLSISGGHLQSFH 396

Query: 721 EMSRSIYM 744
           E+SRS Y+
Sbjct: 397 EISRSKYI 404


>ref|XP_002318079.1| predicted protein [Populus trichocarpa] gi|222858752|gb|EEE96299.1|
           predicted protein [Populus trichocarpa]
          Length = 1083

 Score =  323 bits (829), Expect = 2e-86
 Identities = 170/248 (68%), Positives = 193/248 (77%)
 Frame = +1

Query: 1   VNACNLLVYGPGQVIPSTMKVLQSELKFSLLVGLSSTVQYGRVVLVMDKNFCTDSAGNSF 180
           VNACNL+VYG GQVIPS++ VL+  LK++LLVGL   V YGRVVLVMDKNFCTD+AGN F
Sbjct: 157 VNACNLIVYGAGQVIPSSLTVLEPNLKYTLLVGLYPNVFYGRVVLVMDKNFCTDAAGNRF 216

Query: 181 RRTANSSFFVHFDRRSVFVNLRTHIPEKLLQLNRETRTVEATNNLRNLKVYLYFSEPVLN 360
            R ANSSFFVH DRR VFV+LR HIPEKLLQLN E RTV+ATNN  NLK YLYFSEP+LN
Sbjct: 217 TRAANSSFFVHLDRRRVFVDLRIHIPEKLLQLNNEIRTVKATNNYDNLKFYLYFSEPILN 276

Query: 361 SSLEIMNSLHTSEGLLILRDGKTKGNRRFGFLVTNISSIAIVTISFNSSSIISRQGTAVS 540
           SS EI+NSL+TSEG+L+   G+   NR+FGF V N+SSIAI+TIS  S+SIISR GT+VS
Sbjct: 277 SSAEILNSLNTSEGVLLPISGENLMNRKFGFQVANLSSIAIITISLLSNSIISRPGTSVS 336

Query: 541 PIAPVTFIYDSQRPSVRLSTTSAMRTREHXXXXXXXXXXXXXGFNSSTLSISGGHLQRFL 720
           PIAP TF+YDSQRP VRLST S  RT EH             GFNSS LSI GGHLQ F 
Sbjct: 337 PIAPSTFLYDSQRPVVRLSTLSNTRTGEHSIPISIKFMKPVFGFNSSFLSIGGGHLQGFH 396

Query: 721 EMSRSIYM 744
           E+SRS Y+
Sbjct: 397 EISRSKYI 404


Top