BLASTX nr result

ID: Coptis25_contig00010638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010638
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-13
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141 GESLLGMSYSKEVNLSEPQIVNG-VEIYPK-DILKKGEDEWKEYLVGFFMESRIDYPVVK 314
           G   LG+S  + ++ + P + +G V++ P  D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 315 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 491
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 492 QKKQAKSIPIWVNLYD 539
            K     +P+WV LY+
Sbjct: 233 LKDDFARVPVWVRLYN 248


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 314
           G   LG+S  + ++ + P   +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 315 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 491
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 492 QKKQAKSIPIWVNLYD 539
            K     +P+WV LY+
Sbjct: 233 LKDDLARVPVWVRLYN 248


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 314
           G   LG+S  + ++ + P + +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 315 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 491
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 492 QKKQAKSIPIWVNLYD 539
            K    ++P+WV LY+
Sbjct: 233 LKDDLATVPVWVWLYN 248


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 314
           G   LG+S  + ++ + P + +G      P D+ + G + WK  LVG FM  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVN 172

Query: 315 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 491
               R W + G  ++ S+D  +  F F S +    VLE+ P  +A    V+K W   +  
Sbjct: 173 SIAKRIWSSYGLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQF 232

Query: 492 QKKQAKSIPIWVNLYD 539
            K     +P+WV LY+
Sbjct: 233 LKDDLARVPVWVWLYN 248


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141 GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 314
           G   LG+S  + ++ + P   +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 113 GSKTLGISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 172

Query: 315 QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 491
               R W + G  ++ S+D  +  F F   +    VLE+ P  +A R  V+K W   +  
Sbjct: 173 SIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQF 232

Query: 492 QKKQAKSIPIWVNLYD 539
            K     +P+WV LY+
Sbjct: 233 LKDDLARVPVWVRLYN 248



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141  GESLLGMSYSKEVNLSEPQIVNG--VEIYPKDILKKGEDEWKEYLVGFFMESRIDYPVVK 314
            G   LG+S  + ++ + P   +G      P D+ + G + WK  LVG F+  ++ YPVV 
Sbjct: 906  GSKTLGISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVN 965

Query: 315  QSLARQWKTKGTYDI-STDENYLCFKFVSPEDRQMVLEQGPVFIAGRVFVIKPWGKEIDR 491
                R W + G  ++ S+D  +  F F   +    VLE+ P  +A R  V+K W   +  
Sbjct: 966  SIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQF 1025

Query: 492  QKKQAKSIPIWVNLYD 539
             K     +P+WV LY+
Sbjct: 1026 LKDDLARVPVWVRLYN 1041


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