BLASTX nr result

ID: Coptis25_contig00010622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010622
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ...   375   e-102
ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...   366   4e-99
ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sat...   361   1e-97
ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]     358   6e-97
ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arab...   353   3e-95

>ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus
           communis] gi|223550091|gb|EEF51578.1| Oligosaccharide
           translocation protein rft1, putative [Ricinus communis]
          Length = 436

 Score =  375 bits (963), Expect = e-102
 Identities = 198/282 (70%), Positives = 220/282 (78%)
 Frame = -2

Query: 848 GLRLSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXAAATLLRCMTTYILI 669
           GL L+D +AQAILI+  ACILELLAE                     ATLLRC+T YILI
Sbjct: 124 GLNLNDSYAQAILINACACILELLAEPLYILSQNLLLLKLRLMAETVATLLRCLTMYILI 183

Query: 668 VRQMNMEREIVFALSQIAYGACXXXXXXXXXXXFRIVRSSNLIPFRMGNMLDLDGKLLHM 489
           VRQ  ME++IVFALSQ AYGAC           F    SS L PFR+G ++D D +L +M
Sbjct: 184 VRQPGMEKDIVFALSQTAYGACLFIGYWSYFLLFCSFGSSELFPFRLGTIMDYDKQLCNM 243

Query: 488 CKLFTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATF 309
           C LFT QSFRKLVLQEGEKM+LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSYATF
Sbjct: 244 CMLFTLQSFRKLVLQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATF 303

Query: 308 ARFASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASA 129
           AR ASGQ+P+  RKL G LTEALKLVLLIGLV MAFGPSYSY+LIR+LYG+KWSDGEAS 
Sbjct: 304 ARSASGQHPEKRRKLGGYLTEALKLVLLIGLVFMAFGPSYSYSLIRLLYGNKWSDGEAST 363

Query: 128 ALRYYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFS 3
           AL+YYC Y+IVLAMNGTSEAFLHAVATE QLK+SNDSLL+FS
Sbjct: 364 ALQYYCLYIIVLAMNGTSEAFLHAVATEKQLKRSNDSLLVFS 405


>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  366 bits (939), Expect = 4e-99
 Identities = 193/282 (68%), Positives = 219/282 (77%)
 Frame = -2

Query: 848 GLRLSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXAAATLLRCMTTYILI 669
           GL  SD +AQAILI+G ACILELLAE                    AATLLRC+T YILI
Sbjct: 73  GLTYSDPYAQAILINGCACILELLAEPLYIVSQNLLLLKLRLIVETAATLLRCLTMYILI 132

Query: 668 VRQMNMEREIVFALSQIAYGACXXXXXXXXXXXFRIVRSSNLIPFRMGNMLDLDGKLLHM 489
           V+Q +M++ IVFALSQ AYGAC           FR  RSS L PFR+G ++D D +L  M
Sbjct: 133 VKQTSMDKGIVFALSQTAYGACLFLGYWSYFVLFRAFRSSVLFPFRLGTIMDYDKQLSSM 192

Query: 488 CKLFTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATF 309
           C LFT QSF+KL+LQEGEK +LVW DTP+NQAVYGLVDKLG LVVRLVFLPFEESSYATF
Sbjct: 193 CVLFTLQSFQKLILQEGEKFVLVWLDTPYNQAVYGLVDKLGILVVRLVFLPFEESSYATF 252

Query: 308 ARFASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASA 129
           AR ASG++P  +RKL   L+EALKLVLLIG+V M FGPSYSY+LIR+LYG KWSDGEAS 
Sbjct: 253 ARSASGKDPNKSRKLGSCLSEALKLVLLIGVVFMTFGPSYSYSLIRMLYGRKWSDGEAST 312

Query: 128 ALRYYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFS 3
           AL+YYCFYVIVLAMNGTSEAFLHAVATE+QLK+SNDSLL+FS
Sbjct: 313 ALQYYCFYVIVLAMNGTSEAFLHAVATESQLKRSNDSLLVFS 354


>ref|XP_004146915.1| PREDICTED: protein RFT1 homolog [Cucumis sativus]
           gi|449520289|ref|XP_004167166.1| PREDICTED: protein RFT1
           homolog [Cucumis sativus]
          Length = 528

 Score =  361 bits (926), Expect = 1e-97
 Identities = 192/279 (68%), Positives = 213/279 (76%)
 Frame = -2

Query: 839 LSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXAAATLLRCMTTYILIVRQ 660
           LS+ +AQAILI+G ACILELLAE                     AT  RCMT YIL+VR 
Sbjct: 129 LSNPYAQAILINGCACILELLAEPLYILSQTLLLLKLRLLVETMATFSRCMTMYILLVRG 188

Query: 659 MNMEREIVFALSQIAYGACXXXXXXXXXXXFRIVRSSNLIPFRMGNMLDLDGKLLHMCKL 480
            NME+ I+FALSQ AYGAC           FR  + S+L PFR+GNM D D KL +MC L
Sbjct: 189 SNMEKGIIFALSQSAYGACLFLGYWVYFLNFRAFKWSDLFPFRVGNMKDFDKKLSNMCIL 248

Query: 479 FTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARF 300
           FT QSFRKLVLQEGEKM+LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSY TFAR 
Sbjct: 249 FTLQSFRKLVLQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYTTFARS 308

Query: 299 ASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALR 120
           ASG+ P   RKLA  L+EALKLV+LIGL+ MAFGPSYSYALIR+LYG KWSDGEA  ALR
Sbjct: 309 ASGEYPDKTRKLAICLSEALKLVVLIGLIFMAFGPSYSYALIRLLYGQKWSDGEAPTALR 368

Query: 119 YYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFS 3
           YYC Y+IVLAMNGTSEAFLHAVA E+QLK+SNDSLL+FS
Sbjct: 369 YYCLYIIVLAMNGTSEAFLHAVANESQLKKSNDSLLLFS 407


>ref|XP_003534407.1| PREDICTED: protein RFT1 homolog [Glycine max]
          Length = 518

 Score =  358 bits (920), Expect = 6e-97
 Identities = 189/278 (67%), Positives = 209/278 (75%)
 Frame = -2

Query: 836 SDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXAAATLLRCMTTYILIVRQM 657
           S  H QAILI+GFACILELLAE                     ATL RC+T Y LIV+Q 
Sbjct: 119 SSPHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSRCLTMYFLIVKQT 178

Query: 656 NMEREIVFALSQIAYGACXXXXXXXXXXXFRIVRSSNLIPFRMGNMLDLDGKLLHMCKLF 477
            ME+ I+FALSQ AYGAC            +  R S L PFR G M+D D +L  MC LF
Sbjct: 179 GMEKSIIFALSQSAYGACLFLGYWGYLLLSQKFRVSYLFPFREGKMIDFDQQLSKMCILF 238

Query: 476 TGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARFA 297
           T QSFRKL+LQEGEK++LVW DTP+NQAVYGLVDKLGSLVVRLVFLPFEESSY TFAR A
Sbjct: 239 TFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYVTFARSA 298

Query: 296 SGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAALRY 117
           SGQ P  ++KL  +LTE+LKLVLLIGLV MAFGPSYSY+LIR+LYG KWSDGEAS ALR 
Sbjct: 299 SGQYPGKSKKLGNSLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRC 358

Query: 116 YCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFS 3
           YCFYVIVLAMNGTSEAF+HAVATE QLK+SNDSLLIFS
Sbjct: 359 YCFYVIVLAMNGTSEAFMHAVATERQLKRSNDSLLIFS 396


>ref|XP_002871280.1| hypothetical protein ARALYDRAFT_325378 [Arabidopsis lyrata subsp.
           lyrata] gi|297317117|gb|EFH47539.1| hypothetical protein
           ARALYDRAFT_325378 [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score =  353 bits (906), Expect = 3e-95
 Identities = 178/281 (63%), Positives = 210/281 (74%)
 Frame = -2

Query: 845 LRLSDLHAQAILIHGFACILELLAEXXXXXXXXXXXXXXXXXXXAAATLLRCMTTYILIV 666
           L  SD +AQAILIHGFAC+LEL+AE                    AAT  RC+T + LIV
Sbjct: 74  LSYSDTYAQAILIHGFACVLELMAEPLYILSQTLVKLELRLFVEIAATFARCVTLWSLIV 133

Query: 665 RQMNMEREIVFALSQIAYGACXXXXXXXXXXXFRIVRSSNLIPFRMGNMLDLDGKLLHMC 486
            Q NME+ IVFALSQ+AYG               ++RSS+L PFR GN +D D KL +MC
Sbjct: 134 NQTNMEKGIVFALSQVAYGGSLFLGYWAYFLICGVLRSSDLFPFRPGNFMDFDNKLSNMC 193

Query: 485 KLFTGQSFRKLVLQEGEKMILVWFDTPFNQAVYGLVDKLGSLVVRLVFLPFEESSYATFA 306
            LFT QSFRKL+LQEGEK++LVW DTP+NQAVYG+VDKLG+LVVR+VF PFEE+SY  FA
Sbjct: 194 MLFTFQSFRKLILQEGEKLVLVWLDTPYNQAVYGIVDKLGNLVVRMVFFPFEETSYTIFA 253

Query: 305 RFASGQNPQGNRKLAGALTEALKLVLLIGLVVMAFGPSYSYALIRILYGSKWSDGEASAA 126
           RFASG   +  +KL   LTEALKLV+LIGL+ MAFGPSYSY+LIR+LYG KWSDGEAS A
Sbjct: 254 RFASGDYQERKKKLGIGLTEALKLVILIGLIFMAFGPSYSYSLIRLLYGEKWSDGEASLA 313

Query: 125 LRYYCFYVIVLAMNGTSEAFLHAVATENQLKQSNDSLLIFS 3
           L++YC Y+IVLAMNGTSEAFLHAV TEN+LK+SND LL+FS
Sbjct: 314 LQFYCLYIIVLAMNGTSEAFLHAVGTENELKRSNDMLLVFS 354


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