BLASTX nr result

ID: Coptis25_contig00010613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010613
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265895.1| PREDICTED: uncharacterized protein LOC100242...   148   2e-33
emb|CAN63741.1| hypothetical protein VITISV_041628 [Vitis vinifera]   146   7e-33
gb|AFK46036.1| unknown [Lotus japonicus]                              139   8e-31
gb|AFK44431.1| unknown [Lotus japonicus]                              139   1e-30
ref|XP_002315368.1| predicted protein [Populus trichocarpa] gi|2...   136   7e-30

>ref|XP_002265895.1| PREDICTED: uncharacterized protein LOC100242841 [Vitis vinifera]
          Length = 134

 Score =  148 bits (373), Expect = 2e-33
 Identities = 73/137 (53%), Positives = 102/137 (74%), Gaps = 1/137 (0%)
 Frame = +2

Query: 56  KKMATPAALPPT-PEQQSQRKKGPPQIPTPKELVSHYESQGMETNEATMKVIEDLQNVLV 232
           +K  TP+A+P + P  ++Q++K    +PTPKEL++HYESQGME  EA++KVI+DLQ  L 
Sbjct: 2   EKPLTPSAIPSSQPPPRTQKRK----LPTPKELIAHYESQGMEPQEASLKVIDDLQTALF 57

Query: 233 RVVSSGRGKKDKLMAESCRKLDTAITRLAILELKMDSKPGYGESLAIGVVAGGFVRGIGS 412
           RV+SSGRGKKD+   ++ RKLDTA  RLAILE+K+DSKPGY ++LA+GV + G    +  
Sbjct: 58  RVISSGRGKKDRFTMDASRKLDTANARLAILEMKLDSKPGYPQTLALGVASAGIASALPH 117

Query: 413 VVGAVGDMWNAVRSCTK 463
           V GA   +W++VRS +K
Sbjct: 118 VFGAFSQIWSSVRSASK 134


>emb|CAN63741.1| hypothetical protein VITISV_041628 [Vitis vinifera]
          Length = 134

 Score =  146 bits (369), Expect = 7e-33
 Identities = 72/137 (52%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
 Frame = +2

Query: 56  KKMATPAALPPT-PEQQSQRKKGPPQIPTPKELVSHYESQGMETNEATMKVIEDLQNVLV 232
           +K  TP+ +P + P  ++Q++K    +PTPKEL++HYESQGME  EA++KVI+DLQ  L 
Sbjct: 2   EKPPTPSVIPSSQPPPRTQKRK----LPTPKELIAHYESQGMEPQEASLKVIDDLQTALF 57

Query: 233 RVVSSGRGKKDKLMAESCRKLDTAITRLAILELKMDSKPGYGESLAIGVVAGGFVRGIGS 412
           RV+SSGRGKKD+   ++ RKLDTA  RLAILE+K+DSKPGY ++LA+GV + G    +  
Sbjct: 58  RVISSGRGKKDRFTMDASRKLDTANARLAILEMKLDSKPGYPQTLALGVASAGIASALPH 117

Query: 413 VVGAVGDMWNAVRSCTK 463
           V GA   +W++VRS +K
Sbjct: 118 VFGAFSQIWSSVRSASK 134


>gb|AFK46036.1| unknown [Lotus japonicus]
          Length = 143

 Score =  139 bits (351), Expect = 8e-31
 Identities = 69/135 (51%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
 Frame = +2

Query: 71  PAALPPTPEQQSQRKKGPPQIPTPKELVSHYESQGMETNEATMKVIEDLQNVLVRVVSSG 250
           PA+  P+      +     ++P+P+EL+SHYESQGMET EA++KVIEDLQ  L  V+SSG
Sbjct: 5   PASNLPSKPGIKAKPSIKKKLPSPRELISHYESQGMETEEASLKVIEDLQKALFGVISSG 64

Query: 251 RGKKDKLMAESCRKLDTAITRLAILELKMDSKPGYGESLAIGVVAGGFVRGIGSV----V 418
           RGKKDKL+++S RK+D   +RLAIL++K+DSKPGY E+ AIGV +G  ++GIG+V    +
Sbjct: 65  RGKKDKLLSDSSRKMDAVNSRLAILDMKLDSKPGYVETFAIGVASGAALKGIGAVLPHII 124

Query: 419 GAVGDMWNAVRSCTK 463
           G +  +WN+V   +K
Sbjct: 125 GPLSQIWNSVTIASK 139


>gb|AFK44431.1| unknown [Lotus japonicus]
          Length = 142

 Score =  139 bits (350), Expect = 1e-30
 Identities = 66/116 (56%), Positives = 92/116 (79%), Gaps = 4/116 (3%)
 Frame = +2

Query: 128 QIPTPKELVSHYESQGMETNEATMKVIEDLQNVLVRVVSSGRGKKDKLMAESCRKLDTAI 307
           ++P+P+EL+SHYESQGMET EA++KVIEDLQ  L  V+SSGRGKKDKL+++S RK+D   
Sbjct: 23  KLPSPRELISHYESQGMETEEASLKVIEDLQKALFGVISSGRGKKDKLLSDSSRKMDAVN 82

Query: 308 TRLAILELKMDSKPGYGESLAIGVVAGGFVRGIGSV----VGAVGDMWNAVRSCTK 463
           +RLAIL++K+DSKPGY E+ AIGV +G  ++GIG+V    +G +  +WN+V   +K
Sbjct: 83  SRLAILDMKLDSKPGYVETFAIGVASGAALKGIGAVLPHIIGPLSQIWNSVTIASK 138


>ref|XP_002315368.1| predicted protein [Populus trichocarpa] gi|222864408|gb|EEF01539.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  136 bits (343), Expect = 7e-30
 Identities = 71/141 (50%), Positives = 99/141 (70%), Gaps = 6/141 (4%)
 Frame = +2

Query: 59  KMATPAALPPTPEQQSQRKKGPPQIP-TPKELVSHYESQGMETNEATMKVIEDLQNVLVR 235
           KM  PA    TP + +   KG  + P TP+EL+SHY+SQG+++ EA++KVIEDLQNVL R
Sbjct: 2   KMEQPATPNITPSKDNNSIKGTKKKPPTPQELISHYQSQGLDSQEASIKVIEDLQNVLFR 61

Query: 236 VVSSG-RGKKDKLMAESCRKLDTAITRLAILELKMDSKPGYGESLAIGVVAGGFVRGIGS 412
           V++S  RGKKDKL  E+ RK+D   TR+A++++K+D KPGY E+ AIGV +    RG+ +
Sbjct: 62  VIASNSRGKKDKLAGEASRKIDAVNTRVAVVDMKLDLKPGYAETFAIGVASASAFRGVET 121

Query: 413 ----VVGAVGDMWNAVRSCTK 463
               VVG +  +WNAVR+ TK
Sbjct: 122 VWPHVVGGIAQIWNAVRTVTK 142


Top