BLASTX nr result

ID: Coptis25_contig00010612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010612
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513142.1| conserved hypothetical protein [Ricinus comm...   480   e-133
ref|XP_002267971.1| PREDICTED: uncharacterized protein LOC100243...   475   e-131
emb|CAN78564.1| hypothetical protein VITISV_010403 [Vitis vinifera]   458   e-126
ref|XP_003555821.1| PREDICTED: uncharacterized protein LOC100819...   431   e-118
ref|XP_002874126.1| hypothetical protein ARALYDRAFT_489200 [Arab...   431   e-118

>ref|XP_002513142.1| conserved hypothetical protein [Ricinus communis]
            gi|223548153|gb|EEF49645.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 723

 Score =  480 bits (1236), Expect = e-133
 Identities = 256/414 (61%), Positives = 308/414 (74%), Gaps = 4/414 (0%)
 Frame = -3

Query: 1232 LVEQFL-NRQNSFKSIIFRGTRNEDQPNXXXXXXXXXPLAISLLSTLANSVVDRCSKILC 1056
            ++E F+ N QNS KS+  R   +  Q N          + I  LS LANSVV RCSKIL 
Sbjct: 4    MLETFMKNHQNSLKSLFQRKRSSISQDNDSPADAISP-MPIPQLSPLANSVVARCSKILG 62

Query: 1055 IPTLVLQQHFEMEMPDHANTSSTYARNLLEYCSYQALHVFTNQHPDYLNDKDFRRLTYDM 876
            +PT  LQ  F++E+P+      TYARNLLE+CSY+AL+      P+YL+DKDFRRLTYDM
Sbjct: 63   VPTQELQHQFDIELPESVKQLFTYARNLLEFCSYKALNCVVATTPNYLSDKDFRRLTYDM 122

Query: 875  MLAWELPGIESQQPLLLNENVSP--KNQVVEEEDDGWSLFYTNSISMAVQVDENKTVGPK 702
            MLAWE P IE Q  L   E  SP  +++   E++DG SLFY++  + AVQVD+ +TVG +
Sbjct: 123  MLAWETPCIEIQSKL---ETTSPSSRDEDENEDEDGASLFYSSPTNTAVQVDDTQTVGRE 179

Query: 701  XXXXXXXXXXXXXXXITVHNLFDVLTSSSGGQLHFLIYDKYLGSLDKVIKAAKCASGPPL 522
                           IT HNLF  LTSSS  +LHFLIYDKYL +L K+IKAAK A  P L
Sbjct: 180  SFARIAPACPLVADVITAHNLFYALTSSSADRLHFLIYDKYLHTLHKIIKAAKNAPAP-L 238

Query: 521  CSSLQLADGEIILNIDGTIPTQPVLQHIGISAWPGRLTLTNYALYFES-GVGLYDKAVRY 345
             S+LQLA+GE+IL++DGT+PTQP+LQHIGISAWPGRLTLTNYALYFES GVGLYDKAVRY
Sbjct: 239  ISNLQLAEGELILDVDGTVPTQPILQHIGISAWPGRLTLTNYALYFESLGVGLYDKAVRY 298

Query: 344  DLAMELKQVVKPELTGPLGARLFDKAVMYKSTSVIEPVYFEFPEFKGNSRRDYWLENILE 165
            DLAM++KQV+KPELTGPLGARLFDKAVMYKS SV+EPVYFEFPEFKGNSRRDYWL+  LE
Sbjct: 299  DLAMDMKQVIKPELTGPLGARLFDKAVMYKSASVVEPVYFEFPEFKGNSRRDYWLDICLE 358

Query: 164  VLLAHRFIRKHNFKETQHVEALAKAILGIFRLSAVRQVFHIFPSHYKTLLNYNL 3
            +L AH+FIRK+NFKETQ +E LA+A LGIFR  AVR+ FH F SHYK++L++ L
Sbjct: 359  ILHAHKFIRKNNFKETQQLEVLARASLGIFRYRAVREAFHFFSSHYKSILSFKL 412


>ref|XP_002267971.1| PREDICTED: uncharacterized protein LOC100243889 [Vitis vinifera]
            gi|297742719|emb|CBI35353.3| unnamed protein product
            [Vitis vinifera]
          Length = 731

 Score =  475 bits (1222), Expect = e-131
 Identities = 262/421 (62%), Positives = 307/421 (72%), Gaps = 5/421 (1%)
 Frame = -3

Query: 1250 ESKIGNLVEQFLNRQNS-FKSIIFRGTRNE---DQPNXXXXXXXXXPLAISLLSTLANSV 1083
            ++K G L E F+  Q+S +KS++ R +RN    D PN            I  LS+ ANSV
Sbjct: 8    KNKFGTL-ESFIRSQHSTWKSLLSRASRNSSDADPPNDDTSNHL-----IPNLSSFANSV 61

Query: 1082 VDRCSKILCIPTLVLQQHFEMEMPDHANTSSTYARNLLEYCSYQALHVFTNQHPDYLNDK 903
            V RCSKIL IPT  LQ  FE E+P+      +YARN LE+CSY AL    ++ PDYL++ 
Sbjct: 62   VARCSKILQIPTQELQHRFERELPESVKQPLSYARNFLEFCSYLALFQ-ASRGPDYLSNN 120

Query: 902  DFRRLTYDMMLAWELPGIESQQPLLLNENVSPKNQVVEEEDDGWSLFYTNSISMAVQVDE 723
            +FRRL+YDMMLAWE P  ES+   L  E  S  NQ  E+ED GWSLFY++S + AVQVDE
Sbjct: 121  EFRRLSYDMMLAWEAPDAESEP--LTKEATSCSNQQAEDED-GWSLFYSSSTNTAVQVDE 177

Query: 722  NKTVGPKXXXXXXXXXXXXXXXITVHNLFDVLTSSSGGQLHFLIYDKYLGSLDKVIKAAK 543
             KTVGP+               ITVHNLF+ LTSSS  +LHFLIYDKYL SLDKVIK+AK
Sbjct: 178  EKTVGPEAFARIAPACAAIADIITVHNLFEALTSSSCHRLHFLIYDKYLRSLDKVIKSAK 237

Query: 542  CASGPPLCSSLQLADGEIILNIDGTIPTQPVLQHIGISAWPGRLTLTNYALYFES-GVGL 366
             ASG  L S+LQL +GEIIL+IDGT+PTQPVLQHIGISAWPGRLTLTNYALYFES GVGL
Sbjct: 238  NASGSTLFSNLQLVEGEIILDIDGTVPTQPVLQHIGISAWPGRLTLTNYALYFESLGVGL 297

Query: 365  YDKAVRYDLAMELKQVVKPELTGPLGARLFDKAVMYKSTSVIEPVYFEFPEFKGNSRRDY 186
            YDKA RYDLA ++KQV+KPELTGPLGARLFD+AVMYKS SV EPVY EFPEFK NSRRDY
Sbjct: 298  YDKASRYDLATDMKQVIKPELTGPLGARLFDRAVMYKSISVSEPVYLEFPEFKSNSRRDY 357

Query: 185  WLENILEVLLAHRFIRKHNFKETQHVEALAKAILGIFRLSAVRQVFHIFPSHYKTLLNYN 6
            WL+  +E+L  H+FIRK+N KE Q  E LA+AILGIFR  AVR+ FHIF S YK+LL +N
Sbjct: 358  WLDICIEILHVHKFIRKYNLKEMQQSEVLARAILGIFRYRAVREAFHIFSSQYKSLLVFN 417

Query: 5    L 3
            L
Sbjct: 418  L 418


>emb|CAN78564.1| hypothetical protein VITISV_010403 [Vitis vinifera]
          Length = 653

 Score =  458 bits (1179), Expect = e-126
 Identities = 256/421 (60%), Positives = 301/421 (71%), Gaps = 5/421 (1%)
 Frame = -3

Query: 1250 ESKIGNLVEQFLNRQNS-FKSIIFRGTRNE---DQPNXXXXXXXXXPLAISLLSTLANSV 1083
            ++K G L E F+  Q+S +KS++ R +RN    D PN            I  LS  ANSV
Sbjct: 8    KNKFGTL-ESFIRSQHSTWKSLLSRASRNSSDADPPNDDISNHL-----IPNLSAFANSV 61

Query: 1082 VDRCSKILCIPTLVLQQHFEMEMPDHANTSSTYARNLLEYCSYQALHVFTNQHPDYLNDK 903
            V RCSKIL IPT  LQ  FE E+P+      +YARN LE+CSY AL    ++ PDYL++ 
Sbjct: 62   VARCSKILQIPTQELQHRFERELPESVKQPLSYARNFLEFCSYLALFQ-ASRGPDYLSNN 120

Query: 902  DFRRLTYDMMLAWELPGIESQQPLLLNENVSPKNQVVEEEDDGWSLFYTNSISMAVQVDE 723
            +FRRL+YDMMLAWE P  ES+   L  E  S  NQ  E+ED GWSLFY++S + AVQVDE
Sbjct: 121  EFRRLSYDMMLAWEAPDAESEP--LTKEATSCSNQQAEDED-GWSLFYSSSTNTAVQVDE 177

Query: 722  NKTVGPKXXXXXXXXXXXXXXXITVHNLFDVLTSSSGGQLHFLIYDKYLGSLDKVIKAAK 543
             KTVGP+               ITVHNLF+ LTSSS  +LHFLIYDKYL SLDKVIK+AK
Sbjct: 178  EKTVGPEAFARIAPACAAIADIITVHNLFEALTSSSCHRLHFLIYDKYLRSLDKVIKSAK 237

Query: 542  CASGPPLCSSLQLADGEIILNIDGTIPTQPVLQHIGISAWPGRLTLTNYALYFES-GVGL 366
             ASG  L S+LQL +GEIIL+IDGT+PTQPVLQHIGISAWPGRLTLTNYALYFES GVGL
Sbjct: 238  NASGSTLFSNLQLVEGEIILDIDGTVPTQPVLQHIGISAWPGRLTLTNYALYFESLGVGL 297

Query: 365  YDKAVRYDLAMELKQVVKPELTGPLGARLFDKAVMYKSTSVIEPVYFEFPEFKGNSRRDY 186
            YDKA RYDLA ++KQV+KPELTGPLGARLFD+AV      + EPVY EFPEFK NSRRDY
Sbjct: 298  YDKASRYDLATDMKQVIKPELTGPLGARLFDRAV------ISEPVYLEFPEFKSNSRRDY 351

Query: 185  WLENILEVLLAHRFIRKHNFKETQHVEALAKAILGIFRLSAVRQVFHIFPSHYKTLLNYN 6
            WL+  +E+L  H+FIRK+N KE Q  E LA+AILGIFR  AVR+ FHIF S YK+LL +N
Sbjct: 352  WLDICIEILHVHKFIRKYNLKEMQQSEVLARAILGIFRYRAVREAFHIFSSQYKSLLVFN 411

Query: 5    L 3
            L
Sbjct: 412  L 412


>ref|XP_003555821.1| PREDICTED: uncharacterized protein LOC100819482 [Glycine max]
          Length = 722

 Score =  431 bits (1108), Expect = e-118
 Identities = 236/409 (57%), Positives = 287/409 (70%), Gaps = 5/409 (1%)
 Frame = -3

Query: 1214 NRQNSFKSIIFRGTRNEDQPNXXXXXXXXXP-LAISLLSTLANSVVDRCSKILCIPTLVL 1038
            N Q+S KS+  R       PN             I LLS LANSVV RCSKIL +    L
Sbjct: 11   NHQHSLKSLFHRS--KPSSPNAAAADESAYSPKPIPLLSHLANSVVSRCSKILGMSPQEL 68

Query: 1037 QQHFEMEMPDHANTSSTYARNLLEYCSYQALHVFTNQHPDYLNDKDFRRLTYDMMLAWEL 858
            Q  F+ E+P       TYAR+LLE+CSY+ALH   + + D+LND DFRRLT+DMMLAWE 
Sbjct: 69   QHCFDSELPMGVKELLTYARHLLEFCSYKALHKLIH-NSDFLNDNDFRRLTFDMMLAWEA 127

Query: 857  PGIESQQPLLLNENVSP---KNQVVEEEDDGWSLFYTNSISMAVQVDENKTVGPKXXXXX 687
            P + +     L++N S    K +   +EDD  SLFY++S +MA+QVD+ KTVG +     
Sbjct: 128  PSVHT-----LSDNPSSSSSKEETAGDEDDA-SLFYSSSTNMALQVDDKKTVGLEAFSRI 181

Query: 686  XXXXXXXXXXITVHNLFDVLTSSSGGQLHFLIYDKYLGSLDKVIKAAKCASGPPLCSSLQ 507
                      +TVHNLF  LTS+S  +LHFL+YDKYL  LDKVIK +K         +LQ
Sbjct: 182  APVCVPIADVVTVHNLFHALTSTSAHRLHFLVYDKYLRFLDKVIKNSKNVMAVS-AGNLQ 240

Query: 506  LADGEIILNIDGTIPTQPVLQHIGISAWPGRLTLTNYALYFES-GVGLYDKAVRYDLAME 330
            LA+GEI+L++DGTIPTQPVLQHIGI+AWPGRLTLTNYALYFES GVG+Y+KAVRYDL  +
Sbjct: 241  LAEGEIVLHVDGTIPTQPVLQHIGITAWPGRLTLTNYALYFESLGVGVYEKAVRYDLGTD 300

Query: 329  LKQVVKPELTGPLGARLFDKAVMYKSTSVIEPVYFEFPEFKGNSRRDYWLENILEVLLAH 150
            +KQV++P+LTGPLGARLFDKAVMYKSTSV+EPVYFEFPEFK N RRDYWL+  LE+L AH
Sbjct: 301  MKQVIRPDLTGPLGARLFDKAVMYKSTSVVEPVYFEFPEFKANLRRDYWLDISLEILRAH 360

Query: 149  RFIRKHNFKETQHVEALAKAILGIFRLSAVRQVFHIFPSHYKTLLNYNL 3
            +FIRK+  KE Q  E LA+A+LGIFR  AVR+ F  F SHYKTLL +NL
Sbjct: 361  KFIRKYYLKEVQKSEVLARALLGIFRYRAVREAFRFFSSHYKTLLTFNL 409


>ref|XP_002874126.1| hypothetical protein ARALYDRAFT_489200 [Arabidopsis lyrata subsp.
            lyrata] gi|297319963|gb|EFH50385.1| hypothetical protein
            ARALYDRAFT_489200 [Arabidopsis lyrata subsp. lyrata]
          Length = 729

 Score =  431 bits (1108), Expect = e-118
 Identities = 226/415 (54%), Positives = 291/415 (70%)
 Frame = -3

Query: 1247 SKIGNLVEQFLNRQNSFKSIIFRGTRNEDQPNXXXXXXXXXPLAISLLSTLANSVVDRCS 1068
            +K+G L      +Q+S KS+  R   +  +           P  I  LS LANSVV RCS
Sbjct: 9    AKVGVLENFMRTQQSSLKSLFQRKKSSSGRDGDASPSPIASPKPIPQLSLLANSVVSRCS 68

Query: 1067 KILCIPTLVLQQHFEMEMPDHANTSSTYARNLLEYCSYQALHVFTNQHPDYLNDKDFRRL 888
            KIL IPT  LQ HF++E+P+      TYARN LE+CS+QALH    + PDYL+D++FR+L
Sbjct: 69   KILNIPTEDLQHHFDVELPESVKQLLTYARNFLEFCSFQALHQVMKK-PDYLSDQEFRQL 127

Query: 887  TYDMMLAWELPGIESQQPLLLNENVSPKNQVVEEEDDGWSLFYTNSISMAVQVDENKTVG 708
             +DMMLAWE P + S+Q    N++ +  ++   E++DGWSLFY++  +MA+QVDE K+VG
Sbjct: 128  LFDMMLAWETPSVTSEQE---NKDAASPSKQDSEDEDGWSLFYSSPTNMAMQVDEKKSVG 184

Query: 707  PKXXXXXXXXXXXXXXXITVHNLFDVLTSSSGGQLHFLIYDKYLGSLDKVIKAAKCASGP 528
             +               ITVHNLFD LTSSSG +LHF++YDKY+ +LDK+ KAAK   GP
Sbjct: 185  QEAFARIAPVCPAIADAITVHNLFDALTSSSGHRLHFIVYDKYIRTLDKIFKAAKSTLGP 244

Query: 527  PLCSSLQLADGEIILNIDGTIPTQPVLQHIGISAWPGRLTLTNYALYFESGVGLYDKAVR 348
               ++LQLA GEI+L++DG  P  PVL+H+GISAWPG+LTLTNYALYF+S +G  +KA+R
Sbjct: 245  S-AANLQLAKGEIVLDMDGANPVLPVLKHVGISAWPGKLTLTNYALYFDS-MGGGEKAMR 302

Query: 347  YDLAMELKQVVKPELTGPLGARLFDKAVMYKSTSVIEPVYFEFPEFKGNSRRDYWLENIL 168
            YDL  + KQV+KPELTGPLGAR+FDKA+MYKST V EPVYFEF EFKGN+RRDYWL   L
Sbjct: 303  YDLTEDTKQVIKPELTGPLGARIFDKAIMYKSTIVPEPVYFEFTEFKGNARRDYWLGICL 362

Query: 167  EVLLAHRFIRKHNFKETQHVEALAKAILGIFRLSAVRQVFHIFPSHYKTLLNYNL 3
            E+L    FIR++NFK  Q  E LA+AILGIFR  A+R+ F +F S YKTLL +NL
Sbjct: 363  EILRVQWFIRRYNFKGVQRSEILARAILGIFRYRAIREAFQVFSSQYKTLLIFNL 417


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