BLASTX nr result
ID: Coptis25_contig00010611
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010611 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm... 69 4e-10 ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Gly... 65 7e-09 ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|NP_201386.1| F-box protein [Arabidopsis thaliana] gi|7517065... 63 2e-08 ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 63 2e-08 >ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis] gi|223543465|gb|EEF44996.1| conserved hypothetical protein [Ricinus communis] Length = 401 Score = 68.9 bits (167), Expect = 4e-10 Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 3/136 (2%) Frame = +2 Query: 26 FSKLPSDIVLDIISRLPLKTISACKWVSKTWYALILNPRFAQIHFAKSIQANNSPSLLFR 205 F KLP +I DI+SR P+ ++ CK VS+ WY + NP A +H ++ + N L F Sbjct: 19 FEKLPQEIYFDILSRQPIVSLLECKPVSRHWYTSVRNPLLANMHLNRAAE-QNLCLLFFS 77 Query: 206 VW-HNKFHLIDNECFD--NFETSATAYHIXXXXXXXXXXPACYEVVGTVNGLICFCPVDK 376 W +K L+ E + +T T + +EVVG+ NGLIC Sbjct: 78 DWPRSKLELVQVEHPEPRKLKTLKTPFESVLSE---------FEVVGSCNGLICLY---- 124 Query: 377 DGYFSRSPYYICNPIT 424 YFS P YI NP T Sbjct: 125 -DYFSDDPLYIYNPFT 139 >ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Glycine max] Length = 372 Score = 64.7 bits (156), Expect = 7e-09 Identities = 40/150 (26%), Positives = 68/150 (45%) Frame = +2 Query: 17 LNGFSKLPSDIVLDIISRLPLKTISACKWVSKTWYALILNPRFAQIHFAKSIQANNSPSL 196 + G P ++V+ I++RLP+K++ K V K WY L L+ F Q++ S +P + Sbjct: 15 VRGDGIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVS---RKNPMI 71 Query: 197 LFRVWHNKFHLIDNECFDNFETSATAYHIXXXXXXXXXXPACYEVVGTVNGLICFCPVDK 376 L + + C DN + + + +C NGL+C + Sbjct: 72 LVEISDSSESKTSLICVDNLR-GVSEFSLNFLNDRVKVRASC-------NGLLCCSSIPD 123 Query: 377 DGYFSRSPYYICNPITKDYVIPPKSPTNHI 466 G F Y+CNP+T++Y + PKS H+ Sbjct: 124 KGVF-----YVCNPVTREYRLLPKSRERHV 148 >ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1| predicted protein [Populus trichocarpa] Length = 410 Score = 63.9 bits (154), Expect = 1e-08 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 8/147 (5%) Frame = +2 Query: 29 SKLPSDIVLDIISRLPLKTISACKWVSKTWYALILNPRFAQIHFAKS---IQANNSPSLL 199 S LP DI DI+ +LPLK+ C+ V +TW L+ + F+++ ++ + + PS + Sbjct: 26 SALPDDITADILLQLPLKSKIQCRCVCRTWRNLLSDSYFSEVQRERAQSMLVLRSPPSCV 85 Query: 200 FR----VWHNKFHLIDNECFDNFETSATAYHIXXXXXXXXXXPACY-EVVGTVNGLICFC 364 R + N F+++D E S + + P C+ E+VG+ NGL+C Sbjct: 86 SRKAAALAPNDFYVVDLE-------SGSVRNNVMKLNTKNNLPTCHVELVGSCNGLLCL- 137 Query: 365 PVDKDGYFSRSPYYICNPITKDYVIPP 445 DK+ S+ +Y+CNP+T ++V P Sbjct: 138 -FDKN---SKKVFYLCNPVTGEHVRTP 160 >ref|NP_201386.1| F-box protein [Arabidopsis thaliana] gi|75170652|sp|Q9FHP3.1|FB300_ARATH RecName: Full=F-box protein At5g65850 gi|9759569|dbj|BAB11132.1| unnamed protein product [Arabidopsis thaliana] gi|50253490|gb|AAT71947.1| At5g65850 [Arabidopsis thaliana] gi|51972136|gb|AAU15172.1| At5g65850 [Arabidopsis thaliana] gi|332010731|gb|AED98114.1| F-box protein [Arabidopsis thaliana] Length = 392 Score = 63.2 bits (152), Expect = 2e-08 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 2/149 (1%) Frame = +2 Query: 32 KLPSDIVLDIISRLPLKTISACKWVSKTWYALILNPRFAQIHFAKSIQANNSPSLLF--R 205 ++P DI+++I+ RLP K+I+ C+ VSK W ++I F ++ +S+ + P LLF + Sbjct: 34 QIPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSL---HRPQLLFCCK 90 Query: 206 VWHNKFHLIDNECFDNFETSATAYHIXXXXXXXXXXPACYEVVGTVNGLICFCPVDKDGY 385 N F + + +E S+ CY++ VNGLICF K Sbjct: 91 KDGNLFFFSSPQLQNPYENSSA--------ISLKNFSLCYKISRPVNGLICF----KRKE 138 Query: 386 FSRSPYYICNPITKDYVIPPKSPTNHIEP 472 + + ICNP T + PK I P Sbjct: 139 MNETVTVICNPSTGHTLSLPKPMKTSIGP 167 >ref|XP_003546303.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g49610-like [Glycine max] Length = 359 Score = 63.2 bits (152), Expect = 2e-08 Identities = 39/150 (26%), Positives = 67/150 (44%) Frame = +2 Query: 17 LNGFSKLPSDIVLDIISRLPLKTISACKWVSKTWYALILNPRFAQIHFAKSIQANNSPSL 196 + G P ++V+ I++RLP+K++ K V K WY L L+ F Q+ + +P + Sbjct: 3 VRGDGIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLXQV----SRKNPMI 58 Query: 197 LFRVWHNKFHLIDNECFDNFETSATAYHIXXXXXXXXXXPACYEVVGTVNGLICFCPVDK 376 L + + C DN + + + +C NGL+C + Sbjct: 59 LVEISDSSESKTSLICVDNLR-GVSEFSLNFLNDRVKVRASC-------NGLLCCSSIPD 110 Query: 377 DGYFSRSPYYICNPITKDYVIPPKSPTNHI 466 G F Y+CNP+T++Y + PKS H+ Sbjct: 111 KGVF-----YVCNPVTREYRLLPKSRERHV 135