BLASTX nr result

ID: Coptis25_contig00010610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010610
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40705.1| unknown [Lotus japonicus]                              111   1e-22
ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [...   111   1e-22
ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R...   110   2e-22
ref|XP_003534055.1| PREDICTED: vesicle transport protein SFT2B-l...   110   3e-22
ref|XP_003534054.1| PREDICTED: vesicle transport protein SFT2B-l...   110   3e-22

>gb|AFK40705.1| unknown [Lotus japonicus]
          Length = 178

 Score =  111 bits (278), Expect = 1e-22
 Identities = 54/78 (69%), Positives = 61/78 (78%)
 Frame = +3

Query: 36  PKTQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIP 215
           PK Q++MMLDPVRIYATA Y             VHNKLLTL+AI+LEF AL+WYSLSYIP
Sbjct: 101 PKKQISMMLDPVRIYATAIYIASMIIALFCALYVHNKLLTLLAIILEFGALVWYSLSYIP 160

Query: 216 FARSMVSKIMTTCFDSEF 269
           FARSMVSKIM +CFD+EF
Sbjct: 161 FARSMVSKIMVSCFDTEF 178


>ref|XP_003548262.1| PREDICTED: vesicle transport protein SFT2B [Glycine max]
           gi|255629641|gb|ACU15168.1| unknown [Glycine max]
          Length = 178

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/78 (69%), Positives = 60/78 (76%)
 Frame = +3

Query: 36  PKTQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIP 215
           PK Q+TMMLDPVRIYATA Y             VHNKLLT +AI+LEF AL+WYSLSYIP
Sbjct: 101 PKRQVTMMLDPVRIYATAIYIASMIIALFCALYVHNKLLTFLAIILEFGALVWYSLSYIP 160

Query: 216 FARSMVSKIMTTCFDSEF 269
           FARSMVSKIM +CFD+EF
Sbjct: 161 FARSMVSKIMVSCFDTEF 178


>ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis]
           gi|223542999|gb|EEF44535.1| Vesicle transport protein
           SFT2B, putative [Ricinus communis]
          Length = 174

 Score =  110 bits (275), Expect = 2e-22
 Identities = 54/78 (69%), Positives = 60/78 (76%)
 Frame = +3

Query: 36  PKTQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIP 215
           PK Q+TMMLDPVRIYATA +             VHNKLLTL+AIVLEF AL+WYSLSYIP
Sbjct: 97  PKRQVTMMLDPVRIYATALFLASIIIALFCALYVHNKLLTLLAIVLEFGALVWYSLSYIP 156

Query: 216 FARSMVSKIMTTCFDSEF 269
           FARSMVSK+M  CFD+EF
Sbjct: 157 FARSMVSKVMLACFDTEF 174


>ref|XP_003534055.1| PREDICTED: vesicle transport protein SFT2B-like isoform 2 [Glycine
           max]
          Length = 160

 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +3

Query: 36  PKTQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIP 215
           PK Q+TMMLDP RIYATA Y             VHNKLLTL+AI+LEF AL+WYSLSYIP
Sbjct: 83  PKRQVTMMLDPARIYATAIYIASMIIALFCALYVHNKLLTLLAIILEFGALVWYSLSYIP 142

Query: 216 FARSMVSKIMTTCFDSEF 269
           FAR+MVSKIM +CFD+EF
Sbjct: 143 FARAMVSKIMVSCFDTEF 160


>ref|XP_003534054.1| PREDICTED: vesicle transport protein SFT2B-like isoform 1 [Glycine
           max]
          Length = 178

 Score =  110 bits (274), Expect = 3e-22
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +3

Query: 36  PKTQLTMMLDPVRIYATATYXXXXXXXXXXXXXVHNKLLTLVAIVLEFSALIWYSLSYIP 215
           PK Q+TMMLDP RIYATA Y             VHNKLLTL+AI+LEF AL+WYSLSYIP
Sbjct: 101 PKRQVTMMLDPARIYATAIYIASMIIALFCALYVHNKLLTLLAIILEFGALVWYSLSYIP 160

Query: 216 FARSMVSKIMTTCFDSEF 269
           FAR+MVSKIM +CFD+EF
Sbjct: 161 FARAMVSKIMVSCFDTEF 178


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