BLASTX nr result

ID: Coptis25_contig00010605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010605
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16410.3| unnamed protein product [Vitis vinifera]               98   3e-18
ref|XP_002285539.1| PREDICTED: AP2-like ethylene-responsive tran...    98   4e-18
ref|XP_004142127.1| PREDICTED: AP2-like ethylene-responsive tran...    97   8e-18
emb|CAN74963.1| hypothetical protein VITISV_011083 [Vitis vinifera]    97   8e-18
ref|XP_003597448.1| AP2-like ethylene-responsive transcription f...    97   1e-17

>emb|CBI16410.3| unnamed protein product [Vitis vinifera]
          Length = 535

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -2

Query: 593 TVAQET-LENSI*RHRWAGRYDVHLWDNTRRREGQSRKGRQAC*CMHP*RLLNETSLIIG 417
           T  Q T +   + RHRW GRY+ HLWDN+ RREGQSRKGRQA                  
Sbjct: 161 TFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQA------------------ 202

Query: 416 CSLFGRV*QRREGRKGI*FNLAALKYWGTSTITNFPLNNYKREIEEMKHI 267
               G   +  +  +   ++LAALKYWGTST TNFP++NY+RE+EEMKH+
Sbjct: 203 ----GGYDKEEKAARA--YDLAALKYWGTSTTTNFPISNYERELEEMKHM 246


>ref|XP_002285539.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           PLT2-like [Vitis vinifera]
          Length = 552

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -2

Query: 593 TVAQET-LENSI*RHRWAGRYDVHLWDNTRRREGQSRKGRQAC*CMHP*RLLNETSLIIG 417
           T  Q T +   + RHRW GRY+ HLWDN+ RREGQSRKGRQ                   
Sbjct: 161 TFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVY----------------- 203

Query: 416 CSLFGRV*QRREGRKGI*FNLAALKYWGTSTITNFPLNNYKREIEEMKHI 267
             L G   + +  R    ++LAALKYWGTST TNFP++NY+RE+EEMKH+
Sbjct: 204 --LGGYDKEEKAARA---YDLAALKYWGTSTTTNFPISNYERELEEMKHM 248


>ref|XP_004142127.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           PLT2-like [Cucumis sativus]
          Length = 557

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 52/110 (47%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
 Frame = -2

Query: 593 TVAQET-LENSI*RHRWAGRYDVHLWDNTRRREGQSRKGRQAC*CMHP*RLLNETSLIIG 417
           T  Q T +   + RHRW GRY+ HLWDN+ RREGQSRKGRQ                   
Sbjct: 175 TFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVY----------------- 217

Query: 416 CSLFGRV*QRREGRKGI*FNLAALKYWGTSTITNFPLNNYKREIEEMKHI 267
             L G   + +  R    ++LAALKYWGTST TNFP++NY++E+EEMKH+
Sbjct: 218 --LGGYDKEEKAARA---YDLAALKYWGTSTTTNFPISNYEKEVEEMKHM 262


>emb|CAN74963.1| hypothetical protein VITISV_011083 [Vitis vinifera]
          Length = 552

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 51/110 (46%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = -2

Query: 593 TVAQET-LENSI*RHRWAGRYDVHLWDNTRRREGQSRKGRQAC*CMHP*RLLNETSLIIG 417
           T  Q T +   + RHRW GRY+ HLWDN+ RREGQSRKGRQ                   
Sbjct: 164 TFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGG----------------- 206

Query: 416 CSLFGRV*QRREGRKGI*FNLAALKYWGTSTITNFPLNNYKREIEEMKHI 267
                     +E +    ++LAALKYWGTST TNFP++NY+RE+EEMKH+
Sbjct: 207 --------YDKEEKAARAYDLAALKYWGTSTTTNFPISNYERELEEMKHM 248


>ref|XP_003597448.1| AP2-like ethylene-responsive transcription factor BBM [Medicago
           truncatula] gi|355486496|gb|AES67699.1| AP2-like
           ethylene-responsive transcription factor BBM [Medicago
           truncatula]
          Length = 522

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = -2

Query: 593 TVAQET-LENSI*RHRWAGRYDVHLWDNTRRREGQSRKGRQAC*CMHP*RLLNETSLIIG 417
           T  Q T +   + RHRW GRY+ HLWDNT RREGQSRKGRQ                   
Sbjct: 163 TFGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGRQGG----------------- 205

Query: 416 CSLFGRV*QRREGRKGI*FNLAALKYWGTSTITNFPLNNYKREIEEMKHI 267
                     +E +    ++LAALKYWGTST TNFP++NY++E+E+MKH+
Sbjct: 206 --------YDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEDMKHM 247


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