BLASTX nr result

ID: Coptis25_contig00010576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010576
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC55236.1| TT12a [Gossypium arboreum]                             187   2e-45
emb|CBI22061.3| unnamed protein product [Vitis vinifera]              178   1e-42
ref|XP_002282907.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   178   1e-42
ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   178   1e-42
ref|XP_002282932.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vit...   175   1e-41

>gb|AGC55236.1| TT12a [Gossypium arboreum]
          Length = 506

 Score =  187 bits (475), Expect = 2e-45
 Identities = 97/178 (54%), Positives = 119/178 (66%)
 Frame = +3

Query: 3   YLNLDLTFMLGMSTAAIIRVSTEIECANPRVARFSAMVVNAXXXXXXXXXXXXXXACGTT 182
           YLN D+ FMLG+S AA +RVS E+   +PRVA+FS  VVN                    
Sbjct: 319 YLNWDMQFMLGLSAAASVRVSNELGAGHPRVAKFSVFVVNGTSILISIVFSAIVLIFRVG 378

Query: 183 LGKAFIGDDEVIKAVSEFTPLLAISVFLNGVEPILSGVATGIGRPGLVVCFYACNYYLIG 362
           L KAF  D EVI+AVS+ TPLLAISVFLNG++PILSGVA G G   +V       YY+IG
Sbjct: 379 LSKAFTSDSEVIEAVSDLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNLATYYIIG 438

Query: 363 LTVGFALGFMTYLGVAGIWWGVILGFSLQTLVLVIVVATTDWDKEVDKAFDRLKQRAD 536
           L +G  LGF T LGVAGIWWG+I+G  LQT  LV++ ATT+W+KEV+KA DRLK+ A+
Sbjct: 439 LPIGCVLGFKTSLGVAGIWWGMIIGVLLQTATLVVLTATTNWNKEVEKAADRLKKSAN 496


>emb|CBI22061.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  178 bits (452), Expect = 1e-42
 Identities = 92/178 (51%), Positives = 115/178 (64%)
 Frame = +3

Query: 3   YLNLDLTFMLGMSTAAIIRVSTEIECANPRVARFSAMVVNAXXXXXXXXXXXXXXACGTT 182
           YLN D+TFMLG+S  A +R+S E+  A+P VA+FS +VVNA                   
Sbjct: 243 YLNWDITFMLGLSAGASVRISNELGAAHPLVAKFSVLVVNANSIIISIFFSAIVLIFKIG 302

Query: 183 LGKAFIGDDEVIKAVSEFTPLLAISVFLNGVEPILSGVATGIGRPGLVVCFYACNYYLIG 362
           L K F  D EVI AVS  TPLLAISVFLNG++PILSGVA G G   +V       YYLIG
Sbjct: 303 LSKLFTSDTEVINAVSNLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNLATYYLIG 362

Query: 363 LTVGFALGFMTYLGVAGIWWGVILGFSLQTLVLVIVVATTDWDKEVDKAFDRLKQRAD 536
           L +G  LGF T LGV GIWWG+I+G  LQT+ L+++ A T+WD EV KA DR+K+ ++
Sbjct: 363 LPIGCVLGFKTSLGVVGIWWGMIIGVLLQTVTLIVLTARTNWDAEVVKAVDRIKKSSN 420


>ref|XP_002282907.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
          Length = 506

 Score =  178 bits (452), Expect = 1e-42
 Identities = 92/178 (51%), Positives = 115/178 (64%)
 Frame = +3

Query: 3   YLNLDLTFMLGMSTAAIIRVSTEIECANPRVARFSAMVVNAXXXXXXXXXXXXXXACGTT 182
           YLN D+TFMLG+S  A +R+S E+  A+P VA+FS +VVNA                   
Sbjct: 318 YLNWDITFMLGLSAGASVRISNELGAAHPLVAKFSVLVVNANSIIISIFFSAIVLIFKIG 377

Query: 183 LGKAFIGDDEVIKAVSEFTPLLAISVFLNGVEPILSGVATGIGRPGLVVCFYACNYYLIG 362
           L K F  D EVI AVS  TPLLAISVFLNG++PILSGVA G G   +V       YYLIG
Sbjct: 378 LSKLFTSDTEVINAVSNLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNLATYYLIG 437

Query: 363 LTVGFALGFMTYLGVAGIWWGVILGFSLQTLVLVIVVATTDWDKEVDKAFDRLKQRAD 536
           L +G  LGF T LGV GIWWG+I+G  LQT+ L+++ A T+WD EV KA DR+K+ ++
Sbjct: 438 LPIGCVLGFKTSLGVVGIWWGMIIGVLLQTVTLIVLTARTNWDAEVVKAVDRIKKSSN 495


>ref|XP_003545155.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Glycine max]
          Length = 505

 Score =  178 bits (451), Expect = 1e-42
 Identities = 92/178 (51%), Positives = 116/178 (65%)
 Frame = +3

Query: 3   YLNLDLTFMLGMSTAAIIRVSTEIECANPRVARFSAMVVNAXXXXXXXXXXXXXXACGTT 182
           YLN D+ FMLG+STAA +RVS E+  ++PRVA+FS  VVN                   +
Sbjct: 317 YLNWDMQFMLGLSTAASVRVSNELGASHPRVAKFSVFVVNGTSILISVVFCTIILIFRVS 376

Query: 183 LGKAFIGDDEVIKAVSEFTPLLAISVFLNGVEPILSGVATGIGRPGLVVCFYACNYYLIG 362
           L K F  D +VI AVS  TPLLAISVF NG++PILSGVA G G   LV      +YY++G
Sbjct: 377 LSKLFTSDSDVIDAVSNLTPLLAISVFFNGIQPILSGVAIGSGWQALVAYVNLASYYVVG 436

Query: 363 LTVGFALGFMTYLGVAGIWWGVILGFSLQTLVLVIVVATTDWDKEVDKAFDRLKQRAD 536
           LTVG  LGF T LGVAGIWWG+ILG  +QT+ L+I+ A T+W  EV+KA  R+ + A+
Sbjct: 437 LTVGCVLGFKTSLGVAGIWWGMILGVLIQTVTLIILTARTNWQAEVEKAVVRINKSAE 494


>ref|XP_002282932.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vitis vinifera]
           gi|302143501|emb|CBI22062.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score =  175 bits (443), Expect = 1e-41
 Identities = 91/178 (51%), Positives = 114/178 (64%)
 Frame = +3

Query: 3   YLNLDLTFMLGMSTAAIIRVSTEIECANPRVARFSAMVVNAXXXXXXXXXXXXXXACGTT 182
           YLN D+ FMLG+S A  +RVS E+  ++P+VA+ S +VVN                    
Sbjct: 317 YLNWDMQFMLGLSAATSVRVSNELGASHPKVAKLSVLVVNTNSIIISIFFSAIILIFKVG 376

Query: 183 LGKAFIGDDEVIKAVSEFTPLLAISVFLNGVEPILSGVATGIGRPGLVVCFYACNYYLIG 362
           L K F  D EVI+AVS  TPLLAISVFLNG++PILSGVA G G   +V       YYLIG
Sbjct: 377 LSKLFTNDAEVIEAVSNLTPLLAISVFLNGIQPILSGVAIGSGWQAIVAYVNLATYYLIG 436

Query: 363 LTVGFALGFMTYLGVAGIWWGVILGFSLQTLVLVIVVATTDWDKEVDKAFDRLKQRAD 536
           L +G  LGF T LGVAGIWWG+I+G  LQT+ L+I+ A TDW+ EV KA +RL+  A+
Sbjct: 437 LPIGCVLGFKTSLGVAGIWWGMIIGVLLQTVTLIILTARTDWNAEVSKAAERLRNSAN 494


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