BLASTX nr result

ID: Coptis25_contig00010568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010568
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bon...   110   1e-22
pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Red...   107   1e-21
dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]       107   1e-21
ref|XP_002279720.1| PREDICTED: NADP-dependent alkenal double bon...   100   1e-19
emb|CAN68145.1| hypothetical protein VITISV_035662 [Vitis vinifera]   100   1e-19

>ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis
           vinifera] gi|147792339|emb|CAN61471.1| hypothetical
           protein VITISV_043825 [Vitis vinifera]
          Length = 345

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/80 (67%), Positives = 63/80 (78%)
 Frame = +2

Query: 221 MSNKQIVLGDYITGFPKESDMPVHDSSIPRKVPEGSEAVLVKNLYLSCDPYMRTRMRKIA 400
           +SNKQ++  DY++GFPKESDM V  S+I  KVPEGSEAVLVKNLYLSCDPYMR+RMR I 
Sbjct: 7   VSNKQVIFRDYVSGFPKESDMYVTTSTISLKVPEGSEAVLVKNLYLSCDPYMRSRMRNIQ 66

Query: 401 DGDHYISGFTPGSPLTGLGV 460
               Y+  F PGSP+TG GV
Sbjct: 67  GS--YVEPFKPGSPITGYGV 84


>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
           Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray
           Crystal Structure Of A Double Bond Reductase From
           Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray
           Crystal Structure Of A Nadp(h)-bound Double Bond
           Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B
           Chain B, X-ray Crystal Structure Of A Nadp(h)-bound
           Double Bond Reductase From Nicotiana Tabacum
           gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure
           Of A Ternary Complex Of Double Bond Reductase From
           Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray
           Crystal Structure Of A Ternary Complex Of Double Bond
           Reductase From Nicotiana Tabacum
          Length = 351

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/80 (62%), Positives = 63/80 (78%)
 Frame = +2

Query: 221 MSNKQIVLGDYITGFPKESDMPVHDSSIPRKVPEGSEAVLVKNLYLSCDPYMRTRMRKIA 400
           +SNKQ++L +Y+TG+PKESDM + + +I  KVPEGS  V+VKNLYLSCDPYMR+RMRKI 
Sbjct: 5   VSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMRKIE 64

Query: 401 DGDHYISGFTPGSPLTGLGV 460
               Y+  F PGSP+TG GV
Sbjct: 65  GS--YVESFAPGSPITGYGV 82


>dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]
          Length = 343

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/80 (62%), Positives = 63/80 (78%)
 Frame = +2

Query: 221 MSNKQIVLGDYITGFPKESDMPVHDSSIPRKVPEGSEAVLVKNLYLSCDPYMRTRMRKIA 400
           +SNKQ++L +Y+TG+PKESDM + + +I  KVPEGS  V+VKNLYLSCDPYMR+RMRKI 
Sbjct: 5   VSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMRKIE 64

Query: 401 DGDHYISGFTPGSPLTGLGV 460
               Y+  F PGSP+TG GV
Sbjct: 65  GS--YVESFAPGSPITGYGV 82


>ref|XP_002279720.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis
           vinifera] gi|296084355|emb|CBI24743.3| unnamed protein
           product [Vitis vinifera]
          Length = 342

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = +2

Query: 221 MSNKQIVLGDYITGFPKESDMPVHDSSIPRKVPEGSEAVLVKNLYLSCDPYMRTRMRKIA 400
           +SNKQ++  DYITGFPKE+D+ ++ S+I  KVPE S  VLVKNLYLSCDPYMR  MRK+ 
Sbjct: 3   VSNKQVIYRDYITGFPKETDLVLNTSTISLKVPEESNGVLVKNLYLSCDPYMRILMRKVP 62

Query: 401 DGDHYISGFTPGSPLTGLGV 460
           D ++  + + PGSP+TG GV
Sbjct: 63  D-NNLFTCYIPGSPITGFGV 81


>emb|CAN68145.1| hypothetical protein VITISV_035662 [Vitis vinifera]
          Length = 333

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/80 (60%), Positives = 62/80 (77%)
 Frame = +2

Query: 221 MSNKQIVLGDYITGFPKESDMPVHDSSIPRKVPEGSEAVLVKNLYLSCDPYMRTRMRKIA 400
           +SNKQ++  DYITGFPKE+D+ ++ S+I  KVPE S  VLVKNLYLSCDPYMR  MRK+ 
Sbjct: 3   VSNKQVIYRDYITGFPKETDLVLNTSTISLKVPEESNGVLVKNLYLSCDPYMRILMRKVP 62

Query: 401 DGDHYISGFTPGSPLTGLGV 460
           D ++  + + PGSP+TG GV
Sbjct: 63  D-NNLFTCYIPGSPITGFGV 81


Top