BLASTX nr result

ID: Coptis25_contig00010565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010565
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   131   5e-31
ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   131   5e-31
emb|CBI37089.3| unnamed protein product [Vitis vinifera]              131   6e-31
emb|CAN75718.1| hypothetical protein VITISV_037618 [Vitis vinifera]   131   4e-28
ref|XP_004151977.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   114   9e-27

>ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis
            vinifera]
          Length = 992

 Score =  131 bits (329), Expect(2) = 5e-31
 Identities = 67/105 (63%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = -2

Query: 1226 QANQIKSLDDVQGINSLGWEDQEMIRKYIE-GGVSSSNITTVAANVG--GIEVLQTPGAT 1056
            +ANQIKSLDDV+GI  L W+D++MIRKY+E GG S +    VA+ V   GIEV QT  AT
Sbjct: 59   KANQIKSLDDVEGIELLRWDDRQMIRKYVESGGPSKNTAKDVASAVAECGIEVSQTSRAT 118

Query: 1055 CRRCSQKIMKGEVRISTKLEGQGARGVAWHNASYFMESSPSTQVE 921
            C+RCSQKIMKGEVRIS+K +GQGA+G+AWH+A+ F+E SPST +E
Sbjct: 119  CKRCSQKIMKGEVRISSKPDGQGAKGLAWHHANCFLEMSPSTLIE 163



 Score = 30.8 bits (68), Expect(2) = 5e-31
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 916 KLLGWESLSVSDQEVVSSLTRKGCSTNK-NVEFID 815
           KL GW+ LS SDQE V +L +K  S  +  ++F D
Sbjct: 164 KLSGWDGLSSSDQETVCALIKKSPSAAEIGIQFDD 198


>ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 1 [Vitis
            vinifera]
          Length = 984

 Score =  131 bits (329), Expect(2) = 5e-31
 Identities = 67/105 (63%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = -2

Query: 1226 QANQIKSLDDVQGINSLGWEDQEMIRKYIE-GGVSSSNITTVAANVG--GIEVLQTPGAT 1056
            +ANQIKSLDDV+GI  L W+D++MIRKY+E GG S +    VA+ V   GIEV QT  AT
Sbjct: 59   KANQIKSLDDVEGIELLRWDDRQMIRKYVESGGPSKNTAKDVASAVAECGIEVSQTSRAT 118

Query: 1055 CRRCSQKIMKGEVRISTKLEGQGARGVAWHNASYFMESSPSTQVE 921
            C+RCSQKIMKGEVRIS+K +GQGA+G+AWH+A+ F+E SPST +E
Sbjct: 119  CKRCSQKIMKGEVRISSKPDGQGAKGLAWHHANCFLEMSPSTLIE 163



 Score = 30.8 bits (68), Expect(2) = 5e-31
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 916 KLLGWESLSVSDQEVVSSLTRKGCSTNK 833
           KL GW+ LS SDQE V +L +K  S ++
Sbjct: 164 KLSGWDGLSSSDQETVCALIKKSPSDDE 191


>emb|CBI37089.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  131 bits (329), Expect(2) = 6e-31
 Identities = 67/105 (63%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = -2

Query: 1226 QANQIKSLDDVQGINSLGWEDQEMIRKYIE-GGVSSSNITTVAANVG--GIEVLQTPGAT 1056
            +ANQIKSLDDV+GI  L W+D++MIRKY+E GG S +    VA+ V   GIEV QT  AT
Sbjct: 59   KANQIKSLDDVEGIELLRWDDRQMIRKYVESGGPSKNTAKDVASAVAECGIEVSQTSRAT 118

Query: 1055 CRRCSQKIMKGEVRISTKLEGQGARGVAWHNASYFMESSPSTQVE 921
            C+RCSQKIMKGEVRIS+K +GQGA+G+AWH+A+ F+E SPST +E
Sbjct: 119  CKRCSQKIMKGEVRISSKPDGQGAKGLAWHHANCFLEMSPSTLIE 163



 Score = 30.4 bits (67), Expect(2) = 6e-31
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -3

Query: 916 KLLGWESLSVSDQEVVSSLTRKGCS 842
           KL GW+ LS SDQE V +L +K  S
Sbjct: 164 KLSGWDGLSSSDQETVCALIKKSPS 188


>emb|CAN75718.1| hypothetical protein VITISV_037618 [Vitis vinifera]
          Length = 1016

 Score =  131 bits (329), Expect = 4e-28
 Identities = 67/105 (63%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = -2

Query: 1226 QANQIKSLDDVQGINSLGWEDQEMIRKYIE-GGVSSSNITTVAANVG--GIEVLQTPGAT 1056
            +ANQIKSLDDV+GI  L W+D++MIRKY+E GG S +    VA+ V   GIEV QT  AT
Sbjct: 59   KANQIKSLDDVEGIELLRWDDRQMIRKYVESGGPSKNTAKDVASAVAECGIEVSQTSRAT 118

Query: 1055 CRRCSQKIMKGEVRISTKLEGQGARGVAWHNASYFMESSPSTQVE 921
            C+RCSQKIMKGEVRIS+K +GQGA+G+AWH+A+ F+E SPST +E
Sbjct: 119  CKRCSQKIMKGEVRISSKPDGQGAKGLAWHHANCFLEMSPSTLIE 163


>ref|XP_004151977.1| PREDICTED: poly [ADP-ribose] polymerase 1-like [Cucumis sativus]
            gi|449496917|ref|XP_004160262.1| PREDICTED: poly
            [ADP-ribose] polymerase 1-like [Cucumis sativus]
          Length = 980

 Score =  114 bits (286), Expect(2) = 9e-27
 Identities = 54/102 (52%), Positives = 76/102 (74%)
 Frame = -2

Query: 1226 QANQIKSLDDVQGINSLGWEDQEMIRKYIEGGVSSSNITTVAANVGGIEVLQTPGATCRR 1047
            +A QIKS+DDV+G++SL WEDQ  IR+Y+E  V+++ +       G IEV QT  A+C+ 
Sbjct: 59   KAKQIKSIDDVEGLDSLRWEDQLKIRQYVEDSVAAAAVVVTPIEYG-IEVSQTSRASCKH 117

Query: 1046 CSQKIMKGEVRISTKLEGQGARGVAWHNASYFMESSPSTQVE 921
            C QKIMKGEVR+ST L+G+G +G+AW++A+ +ME  PS QVE
Sbjct: 118  CKQKIMKGEVRLSTVLDGKGTKGLAWYHANCYMEQCPSAQVE 159



 Score = 33.1 bits (74), Expect(2) = 9e-27
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 916 KLLGWESLSVSDQEVVSSLTRKGCSTNKNVE 824
           KL GW++L  SDQ  +S+L +K  S  KN E
Sbjct: 160 KLAGWQNLPPSDQAAISTLVKKPSSAVKNEE 190


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