BLASTX nr result

ID: Coptis25_contig00010561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010561
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278795.1| PREDICTED: DUF246 domain-containing protein ...   520   e-145
ref|XP_002284838.2| PREDICTED: DUF246 domain-containing protein ...   514   e-143
emb|CBI37793.3| unnamed protein product [Vitis vinifera]              507   e-141
ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002889072.1| hypothetical protein ARALYDRAFT_476779 [Arab...   496   e-138

>ref|XP_002278795.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
            vinifera]
          Length = 680

 Score =  520 bits (1339), Expect = e-145
 Identities = 261/349 (74%), Positives = 293/349 (83%), Gaps = 4/349 (1%)
 Frame = -2

Query: 1447 LANKLDNDLQKLRCRVNYHALRFTEPILKMGKQLVQRMRTRSTHFIALHLRFEPDMLAFS 1268
            L+N+LD DLQKLRCRVNYHAL+FT  IL+MGK+LV+RMR +S HFIALHLRFEPDMLAFS
Sbjct: 333  LSNRLDMDLQKLRCRVNYHALKFTNSILEMGKKLVERMRMKSKHFIALHLRFEPDMLAFS 392

Query: 1267 GCYYGGEEKERKELGAIRKRWKTLHSSNPEKERRHGKCPLTPEEVGLMLRALGFGSDVHI 1088
            GCYYGG EKER ELGA+RKRWKTLH  NP+KERR GKCPLTPEEVGLMLRALGFGSDVHI
Sbjct: 393  GCYYGGGEKERTELGALRKRWKTLHIRNPDKERRQGKCPLTPEEVGLMLRALGFGSDVHI 452

Query: 1087 YVASGEVYGGEETLAPLKALFPNFHSKETITRKEELSPFSSFSSRMAALDYIVCDESDVF 908
            YVASGEVYGGE TLAPLKALFPNFHSK+TI  +EEL+PFSSFSSRMAALD+IVCDESDVF
Sbjct: 453  YVASGEVYGGETTLAPLKALFPNFHSKDTIASEEELAPFSSFSSRMAALDFIVCDESDVF 512

Query: 907  VTNNNGNMARMLAGRRRYSGHKRTIRPNAKKLSSLFLNRVNMTWEGFSSKVRTHQRGFMG 728
            VTNNNGNMARMLAGRRRY GHK TIRPNAKKL  LF+NR NMTWE F+S VR+ Q GFMG
Sbjct: 513  VTNNNGNMARMLAGRRRYFGHKPTIRPNAKKLYRLFMNRNNMTWEEFASGVRSRQIGFMG 572

Query: 727  EPNEVRLGRGEFHENPSTCICENSDTETKDNLNSEVQFKVGPKNVS--KDVGELGDDQYA 554
            EPNEVR GRGEFHENPS+CICE  + + + +L S+VQ  VG +++S  KD  E  D+Q  
Sbjct: 573  EPNEVRPGRGEFHENPSSCICELPEAKARGDLGSKVQANVGTEDLSTGKD-SEQADEQPT 631

Query: 553  DDEPDWTDMDYGENLIGPQDKDLSNLTDYSL--LIKSEEQPELEDILSD 413
            +DE DW DMDY EN  G Q K   NLTD  L  L+K++ QPELE++ SD
Sbjct: 632  EDEHDWIDMDYSENENGLQGKGSLNLTDSDLGGLLKADPQPELEEMFSD 680


>ref|XP_002284838.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
            vinifera] gi|302141666|emb|CBI18869.3| unnamed protein
            product [Vitis vinifera]
          Length = 573

 Score =  514 bits (1324), Expect = e-143
 Identities = 256/345 (74%), Positives = 287/345 (83%)
 Frame = -2

Query: 1447 LANKLDNDLQKLRCRVNYHALRFTEPILKMGKQLVQRMRTRSTHFIALHLRFEPDMLAFS 1268
            LANKLD DLQKLRCRVNYHALRFT PIL MG++LV RMR RS H+IALHLRFEPDMLAFS
Sbjct: 232  LANKLDTDLQKLRCRVNYHALRFTVPILDMGRELVHRMRIRSKHYIALHLRFEPDMLAFS 291

Query: 1267 GCYYGGEEKERKELGAIRKRWKTLHSSNPEKERRHGKCPLTPEEVGLMLRALGFGSDVHI 1088
            GCYYGG EKERKELGAIRKRWKTLH+SNP+KERRHGKCPLTPEEVGLMLRALG+GSDVHI
Sbjct: 292  GCYYGGGEKERKELGAIRKRWKTLHTSNPDKERRHGKCPLTPEEVGLMLRALGYGSDVHI 351

Query: 1087 YVASGEVYGGEETLAPLKALFPNFHSKETITRKEELSPFSSFSSRMAALDYIVCDESDVF 908
            YVASGEVYGGEETLAPLKALFPNF+SK+TI RKEEL PF++FS+RMAALD+IVCDESDVF
Sbjct: 352  YVASGEVYGGEETLAPLKALFPNFYSKDTIGRKEELQPFAAFSARMAALDFIVCDESDVF 411

Query: 907  VTNNNGNMARMLAGRRRYSGHKRTIRPNAKKLSSLFLNRVNMTWEGFSSKVRTHQRGFMG 728
            VTNNNGNMA++LAGRRRY GHK TIRPNAKKLS LFLN+ N +WE F+S+VR +QRGFMG
Sbjct: 412  VTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLSRLFLNKGNTSWEVFASRVRIYQRGFMG 471

Query: 727  EPNEVRLGRGEFHENPSTCICENSDTETKDNLNSEVQFKVGPKNVSKDVGELGDDQYADD 548
            EPNEVR GRGEFHENPS+CICE S    K +  S+   K       KD  E  DDQ  DD
Sbjct: 472  EPNEVRPGRGEFHENPSSCICEESGANAKRDSGSQKSGKES-NATRKDFDE--DDQNMDD 528

Query: 547  EPDWTDMDYGENLIGPQDKDLSNLTDYSLLIKSEEQPELEDILSD 413
            E +W D D  E+  GPQ+  L+N T     + + E+PELE++LSD
Sbjct: 529  ELEWMDPDDEEDQTGPQETGLANGTGLDYGVLASEEPELEEMLSD 573


>emb|CBI37793.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  507 bits (1305), Expect = e-141
 Identities = 256/347 (73%), Positives = 284/347 (81%), Gaps = 2/347 (0%)
 Frame = -2

Query: 1447 LANKLDNDLQKLRCRVNYHALRFTEPILKMGKQLVQRMRTRSTHFIALHLRFEPDMLAFS 1268
            L+N+LD DLQKLRCRVNYHAL+FT  IL+MGK+LV+RMR +S HFIALHLRFEPDMLAFS
Sbjct: 280  LSNRLDMDLQKLRCRVNYHALKFTNSILEMGKKLVERMRMKSKHFIALHLRFEPDMLAFS 339

Query: 1267 GCYYGGEEKERKELGAIRKRWKTLHSSNPEKERRHGKCPLTPEEVGLMLRALGFGSDVHI 1088
            GCYYGG EKER ELGA+RKRWKTLH  NP+KERR GKCPLTPEEVGLMLRALGFGSDVHI
Sbjct: 340  GCYYGGGEKERTELGALRKRWKTLHIRNPDKERRQGKCPLTPEEVGLMLRALGFGSDVHI 399

Query: 1087 YVASGEVYGGEETLAPLKALFPNFHSKETITRKEELSPFSSFSSRMAALDYIVCDESDVF 908
            YVASGEVYGGE TLAPLKALFPNFHSK+TI  +EEL+PFSSFSSRMAALD+IVCDESDVF
Sbjct: 400  YVASGEVYGGETTLAPLKALFPNFHSKDTIASEEELAPFSSFSSRMAALDFIVCDESDVF 459

Query: 907  VTNNNGNMARMLAGRRRYSGHKRTIRPNAKKLSSLFLNRVNMTWEGFSSKVRTHQRGFMG 728
            VTNNNGNMARMLAGRRRY GHK TIRPNAKKL  LF+NR NMTWE F+S VR+ Q GFMG
Sbjct: 460  VTNNNGNMARMLAGRRRYFGHKPTIRPNAKKLYRLFMNRNNMTWEEFASGVRSRQIGFMG 519

Query: 727  EPNEVRLGRGEFHENPSTCICENSDTETKDNLNSEVQFKVGPKNVSKDVGELGDDQYADD 548
            EPNEVR GRGEFHENPS+CICE  + + + +L             SKD  E  D+Q  +D
Sbjct: 520  EPNEVRPGRGEFHENPSSCICELPEAKARGDLG------------SKD-SEQADEQPTED 566

Query: 547  EPDWTDMDYGENLIGPQDKDLSNLTDYSL--LIKSEEQPELEDILSD 413
            E DW DMDY EN  G Q K   NLTD  L  L+K++ QPELE++ SD
Sbjct: 567  EHDWIDMDYSENENGLQGKGSLNLTDSDLGGLLKADPQPELEEMFSD 613


>ref|XP_002307782.1| predicted protein [Populus trichocarpa] gi|222857231|gb|EEE94778.1|
            predicted protein [Populus trichocarpa]
          Length = 574

 Score =  504 bits (1297), Expect = e-140
 Identities = 251/350 (71%), Positives = 283/350 (80%), Gaps = 5/350 (1%)
 Frame = -2

Query: 1447 LANKLDNDLQKLRCRVNYHALRFTEPILKMGKQLVQRMRTRSTHFIALHLRFEPDMLAFS 1268
            LANKLD  LQKLRCRVNYHAL+FT+PIL+MG++LV RMR +S HFIALHLRFEPDMLAFS
Sbjct: 233  LANKLDTQLQKLRCRVNYHALKFTDPILRMGEKLVHRMRMKSKHFIALHLRFEPDMLAFS 292

Query: 1267 GCYYGGEEKERKELGAIRKRWKTLHSSNPEKERRHGKCPLTPEEVGLMLRALGFGSDVHI 1088
            GCYYGG +KERKELGAIRKRWKTLH+SNP+KERRHGKCPLTP+EVGLMLRALG+GSDVHI
Sbjct: 293  GCYYGGGDKERKELGAIRKRWKTLHASNPDKERRHGKCPLTPKEVGLMLRALGYGSDVHI 352

Query: 1087 YVASGEVYGGEETLAPLKALFPNFHSKETITRKEELSPFSSFSSRMAALDYIVCDESDVF 908
            YVASGEVY GE+TLAPLKALFPNF++KET+  KEEL PFSSFSSRMAALD+IVCDESDVF
Sbjct: 353  YVASGEVYDGEDTLAPLKALFPNFYTKETLASKEELEPFSSFSSRMAALDFIVCDESDVF 412

Query: 907  VTNNNGNMARMLAGRRRYSGHKRTIRPNAKKLSSLFLNRVNMTWEGFSSKVRTHQRGFMG 728
            VTNNNGNMA++LAGRRRY GHK TIRPNAKKL  LFLN+  M+WE F+SK+RT QRGFMG
Sbjct: 413  VTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRLFLNQTTMSWEAFASKMRTFQRGFMG 472

Query: 727  EPNEVRLGRGEFHENPSTCICENSDTETKDNLNSEVQFKVGPKNVSKDVGELGDD----- 563
            EP EVR GRGEFHENP TCICE+S+ + K N         GP+   K    LGDD     
Sbjct: 473  EPKEVRPGRGEFHENPHTCICEDSEAKAKKN--------SGPRKYGKGYDALGDDIPSDY 524

Query: 562  QYADDEPDWTDMDYGENLIGPQDKDLSNLTDYSLLIKSEEQPELEDILSD 413
            Q  DDEP+  D D   +  GPQ+K   N T       + E+PELE+ILSD
Sbjct: 525  QNVDDEPELPDPDDDGDQDGPQEKGQFNETGMDYDELTNEEPELEEILSD 574


>ref|XP_002889072.1| hypothetical protein ARALYDRAFT_476779 [Arabidopsis lyrata subsp.
            lyrata] gi|297334913|gb|EFH65331.1| hypothetical protein
            ARALYDRAFT_476779 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  496 bits (1277), Expect = e-138
 Identities = 248/351 (70%), Positives = 289/351 (82%), Gaps = 6/351 (1%)
 Frame = -2

Query: 1447 LANKLDNDLQKLRCRVNYHALRFTEPILKMGKQLVQRMRTRSTHFIALHLRFEPDMLAFS 1268
            L+NKL +DLQKLRCRVNYHAL+FT+PIL MG +LV+RMR RS HFIALHLRFEPDMLAFS
Sbjct: 226  LSNKLSDDLQKLRCRVNYHALKFTDPILTMGNELVRRMRLRSKHFIALHLRFEPDMLAFS 285

Query: 1267 GCYYGGEEKERKELGAIRKRWKTLHSSNPEKERRHGKCPLTPEEVGLMLRALGFGSDVHI 1088
            GCYYGG +KER+EL AIR+RWKTLH +NPEK+RR G+CPLTPEEVGLMLRALG+GSDVHI
Sbjct: 286  GCYYGGGDKERRELAAIRRRWKTLHINNPEKQRRQGRCPLTPEEVGLMLRALGYGSDVHI 345

Query: 1087 YVASGEVYGGEETLAPLKALFPNFHSKETITRKEELSPFSSFSSRMAALDYIVCDESDVF 908
            YVASGEVYGGEE+LAPLKALFP+F+SK+TI  KEEL PFSS+SSRMAALD++VCDESDVF
Sbjct: 346  YVASGEVYGGEESLAPLKALFPHFYSKDTIATKEELEPFSSYSSRMAALDFLVCDESDVF 405

Query: 907  VTNNNGNMARMLAGRRRYSGHKRTIRPNAKKLSSLFLNRVNMTWEGFSSKVRTHQRGFMG 728
            VTNNNGNMA++LAGRRRY GHK TIRPNAKKL  LF+N+ N TWE FSS+VR+ QRGFMG
Sbjct: 406  VTNNNGNMAKILAGRRRYLGHKPTIRPNAKKLYRLFMNKENTTWEEFSSRVRSFQRGFMG 465

Query: 727  EPNEVRLGRGEFHENPSTCICENSDTETKDNLNSEVQFKVGPKNVSKD----VGELGDDQ 560
            EP EVR GRGEFHENPSTCICE+++ + K  + S    K+G KN S +    V    DDQ
Sbjct: 466  EPKEVRAGRGEFHENPSTCICEDTEAKAKAQMESR---KLGKKNKSTNKDAAVTVTNDDQ 522

Query: 559  YADDEPDWTDMDYGENLIGPQDKDLSNLT--DYSLLIKSEEQPELEDILSD 413
              +DEPDW++ DY E     +D+ L N T  DY     S+E PELE++LSD
Sbjct: 523  TEEDEPDWSEPDYEEEQSDLKDRGLYNGTSLDYDDPSTSDE-PELEEMLSD 572


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