BLASTX nr result
ID: Coptis25_contig00010556
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00010556
(2122 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002881182.1| hypothetical protein ARALYDRAFT_344921 [Arab... 318 5e-84
ref|XP_002275722.2| PREDICTED: uncharacterized protein LOC100264... 312 2e-82
emb|CBI21529.3| unnamed protein product [Vitis vinifera] 312 2e-82
ref|NP_565727.2| tRNAHis guanylyltransferase [Arabidopsis thalia... 310 1e-81
ref|XP_002862851.1| hypothetical protein ARALYDRAFT_920213 [Arab... 306 2e-80
>ref|XP_002881182.1| hypothetical protein ARALYDRAFT_344921 [Arabidopsis lyrata subsp.
lyrata] gi|297327021|gb|EFH57441.1| hypothetical protein
ARALYDRAFT_344921 [Arabidopsis lyrata subsp. lyrata]
Length = 520
Score = 318 bits (814), Expect = 5e-84
Identities = 146/244 (59%), Positives = 186/244 (76%)
Frame = -3
Query: 2117 KNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGV 1938
+NKLLP TW+VVRIDG HFH+FSD+H+F+KPND +AL LMN+CAVAVLE+F D+ AYGV
Sbjct: 281 ENKLLPLTWVVVRIDGCHFHRFSDVHEFEKPNDEQALKLMNSCAVAVLEEFEDIHFAYGV 340
Query: 1937 SDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICY 1758
SDEYSFV K S +R +YVL+W EFFPHKE++ PSFDGRA+CY
Sbjct: 341 SDEYSFVLKKESELYKRQSSKIISAITSFFTSTYVLQWGEFFPHKEMKYPPSFDGRAVCY 400
Query: 1757 PSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQF 1578
P++ IL DYLAWRQVDCHINNQYNTCFWMLVKSGKTK+++Q LKGTQT +KN+LL +QF
Sbjct: 401 PTHNILLDYLAWRQVDCHINNQYNTCFWMLVKSGKTKTQSQDYLKGTQTREKNELLSRQF 460
Query: 1577 GIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCDIIGESFWKENP 1398
GI+YN LP +FR GS +FR K E+G K++ +V+++HC+II SFW+E+P
Sbjct: 461 GIEYNALPVIFRMGSSVFRRK------EAENGVVSGKKLEGEVVVDHCNIIEHSFWEEHP 514
Query: 1397 HLIA 1386
H+++
Sbjct: 515 HILS 518
Score = 260 bits (664), Expect = 1e-66
Identities = 123/234 (52%), Positives = 161/234 (68%), Gaps = 1/234 (0%)
Frame = -3
Query: 2090 IVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGVSDEYSFVFS 1911
+VVRIDGRHF +FS +H+F++PND AL LMN+C+ AVLE+F D++ AYG SDEYSFVF
Sbjct: 24 MVVRIDGRHFSRFSQVHEFERPNDETALNLMNSCSAAVLEEFPDIIFAYGYSDEYSFVFK 83
Query: 1910 KTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICYPSNKILRDY 1731
KTS F QR YV KW +FFP K+L PSF + + S ++L+ Y
Sbjct: 84 KTSRFYQRRASKILSLVASFVAAIYVTKWKDFFPQKKLEYAPSFRSKVVSCASAEVLQAY 143
Query: 1730 LAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQFGIDYNTLPA 1551
+AWRQ DCH NNQY+TCFWMLVKSGK+ SE Q ILK TQ KN+LL+++FGI+Y TLP
Sbjct: 144 VAWRQHDCHANNQYDTCFWMLVKSGKSISETQEILKDTQKQQKNELLFQKFGINYKTLPE 203
Query: 1550 MFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCD-IIGESFWKENPHL 1392
+ R+GS +F+ K EE V+H E+G +P+ + + K + H + I G SFW E P L
Sbjct: 204 LSRQGSCLFKKKVEETVKHDENG-NPVKRSRRKAVFVHSENIAGRSFWNEQPSL 256
>ref|XP_002275722.2| PREDICTED: uncharacterized protein LOC100264494 [Vitis vinifera]
Length = 562
Score = 312 bits (800), Expect = 2e-82
Identities = 147/243 (60%), Positives = 185/243 (76%)
Frame = -3
Query: 2117 KNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGV 1938
+NKL+P TWIVVRIDG HFH+FS++H+F+KPND +AL LMN+CAVAVLE+F DV+ +YGV
Sbjct: 315 ENKLMPLTWIVVRIDGCHFHRFSEVHEFEKPNDEQALNLMNSCAVAVLEQFKDVIFSYGV 374
Query: 1937 SDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICY 1758
SDEYSFV K S F QR G YV+KW EFFP KEL+ P FDGRA+ Y
Sbjct: 375 SDEYSFVLKKDSQFYQRRGSEIVTALVSYFTSIYVMKWKEFFPQKELKYPPCFDGRAVLY 434
Query: 1757 PSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQF 1578
P+++ILRDYL WRQVDCHINNQYNTCFWMLVKSGK+KSEAQ+ LKGTQ +KN++L +QF
Sbjct: 435 PTSEILRDYLTWRQVDCHINNQYNTCFWMLVKSGKSKSEAQAYLKGTQAREKNEVLLQQF 494
Query: 1577 GIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCDIIGESFWKENP 1398
GIDYNTLP MFR+GS F ++ E+ + E+G K KV++E C+II +SFW+ +P
Sbjct: 495 GIDYNTLPLMFRQGSSAFWNEEEKTGMY-ENGAS-AEKSGKKVVVEQCNIIEQSFWEAHP 552
Query: 1397 HLI 1389
++
Sbjct: 553 SIL 555
Score = 278 bits (710), Expect = 5e-72
Identities = 132/245 (53%), Positives = 174/245 (71%), Gaps = 1/245 (0%)
Frame = -3
Query: 2120 VKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYG 1941
V+++++P IVVRIDGR F +FS++H+F+KPND +AL LMN+CA A+LE++ D+V +YG
Sbjct: 48 VEDEVMPPNLIVVRIDGRGFRRFSEVHEFEKPNDERALNLMNSCAAAMLEEYPDIVFSYG 107
Query: 1940 VSDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAIC 1761
SDEYSFVF KT+ F QR Y KW EFFPHKELR PSF IC
Sbjct: 108 FSDEYSFVFKKTTKFYQRRASKIVSLVVSFFTSIYTTKWKEFFPHKELRYPPSFRAWVIC 167
Query: 1760 YPSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQ 1581
S ++L+ YLAWRQ DCHINNQYNTCFWMLVK GKT+ EAQ +LKGT +KN+LL++Q
Sbjct: 168 CASMEVLQTYLAWRQNDCHINNQYNTCFWMLVKCGKTEEEAQEVLKGTHKQEKNELLFQQ 227
Query: 1580 FGIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCD-IIGESFWKE 1404
FGI+Y LP+MFR+GS + + + E IV++ E+G P+ +++ K II H D I SFW E
Sbjct: 228 FGINYKNLPSMFRQGSCVCKTQVEAIVKYSENG-TPVKRLRRKPIIVHSDNIAARSFWNE 286
Query: 1403 NPHLI 1389
+P L+
Sbjct: 287 HPFLL 291
>emb|CBI21529.3| unnamed protein product [Vitis vinifera]
Length = 1073
Score = 312 bits (800), Expect = 2e-82
Identities = 147/243 (60%), Positives = 185/243 (76%)
Frame = -3
Query: 2117 KNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGV 1938
+NKL+P TWIVVRIDG HFH+FS++H+F+KPND +AL LMN+CAVAVLE+F DV+ +YGV
Sbjct: 741 ENKLMPLTWIVVRIDGCHFHRFSEVHEFEKPNDEQALNLMNSCAVAVLEQFKDVIFSYGV 800
Query: 1937 SDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICY 1758
SDEYSFV K S F QR G YV+KW EFFP KEL+ P FDGRA+ Y
Sbjct: 801 SDEYSFVLKKDSQFYQRRGSEIVTALVSYFTSIYVMKWKEFFPQKELKYPPCFDGRAVLY 860
Query: 1757 PSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQF 1578
P+++ILRDYL WRQVDCHINNQYNTCFWMLVKSGK+KSEAQ+ LKGTQ +KN++L +QF
Sbjct: 861 PTSEILRDYLTWRQVDCHINNQYNTCFWMLVKSGKSKSEAQAYLKGTQAREKNEVLLQQF 920
Query: 1577 GIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCDIIGESFWKENP 1398
GIDYNTLP MFR+GS F ++ E+ + E+G K KV++E C+II +SFW+ +P
Sbjct: 921 GIDYNTLPLMFRQGSSAFWNEEEKTGMY-ENGAS-AEKSGKKVVVEQCNIIEQSFWEAHP 978
Query: 1397 HLI 1389
++
Sbjct: 979 SIL 981
Score = 278 bits (710), Expect = 5e-72
Identities = 132/245 (53%), Positives = 174/245 (71%), Gaps = 1/245 (0%)
Frame = -3
Query: 2120 VKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYG 1941
V+++++P IVVRIDGR F +FS++H+F+KPND +AL LMN+CA A+LE++ D+V +YG
Sbjct: 474 VEDEVMPPNLIVVRIDGRGFRRFSEVHEFEKPNDERALNLMNSCAAAMLEEYPDIVFSYG 533
Query: 1940 VSDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAIC 1761
SDEYSFVF KT+ F QR Y KW EFFPHKELR PSF IC
Sbjct: 534 FSDEYSFVFKKTTKFYQRRASKIVSLVVSFFTSIYTTKWKEFFPHKELRYPPSFRAWVIC 593
Query: 1760 YPSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQ 1581
S ++L+ YLAWRQ DCHINNQYNTCFWMLVK GKT+ EAQ +LKGT +KN+LL++Q
Sbjct: 594 CASMEVLQTYLAWRQNDCHINNQYNTCFWMLVKCGKTEEEAQEVLKGTHKQEKNELLFQQ 653
Query: 1580 FGIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCD-IIGESFWKE 1404
FGI+Y LP+MFR+GS + + + E IV++ E+G P+ +++ K II H D I SFW E
Sbjct: 654 FGINYKNLPSMFRQGSCVCKTQVEAIVKYSENG-TPVKRLRRKPIIVHSDNIAARSFWNE 712
Query: 1403 NPHLI 1389
+P L+
Sbjct: 713 HPFLL 717
>ref|NP_565727.2| tRNAHis guanylyltransferase [Arabidopsis thaliana]
gi|426021251|sp|F4IRQ5.1|THG1_ARATH RecName:
Full=tRNA(His) guanylyltransferase 1
gi|330253469|gb|AEC08563.1| tRNAHis guanylyltransferase
[Arabidopsis thaliana]
Length = 567
Score = 310 bits (793), Expect = 1e-81
Identities = 143/244 (58%), Positives = 184/244 (75%)
Frame = -3
Query: 2117 KNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGV 1938
+NKLLP TW+VVRIDG HFH+FSD+H+F+KPND +AL LMN+CAVAVLE+F D+ AYGV
Sbjct: 328 ENKLLPLTWVVVRIDGCHFHRFSDVHEFEKPNDEQALKLMNSCAVAVLEEFEDIHFAYGV 387
Query: 1937 SDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICY 1758
SDEYSFV K S +R +YVL+W EFFPHKEL+ PSFDGRA+CY
Sbjct: 388 SDEYSFVLKKESELYKRQSSKIISAVASFFTSTYVLQWGEFFPHKELKYPPSFDGRAVCY 447
Query: 1757 PSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQF 1578
P+ IL DYLAWRQVDCHINNQYNTCFWMLVKSGK K+++Q LKGTQT +KN+LL +QF
Sbjct: 448 PTYNILLDYLAWRQVDCHINNQYNTCFWMLVKSGKNKTQSQDYLKGTQTREKNELLSRQF 507
Query: 1577 GIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCDIIGESFWKENP 1398
GI+YN+LP +FR GS +FR ++ E+G K++ +V+++HC+II FW+E+
Sbjct: 508 GIEYNSLPVIFRMGSSVFR------LKEAENGVVSGKKLEGEVVVDHCNIIERCFWEEHL 561
Query: 1397 HLIA 1386
H+++
Sbjct: 562 HILS 565
Score = 264 bits (674), Expect = 8e-68
Identities = 125/234 (53%), Positives = 162/234 (69%), Gaps = 1/234 (0%)
Frame = -3
Query: 2090 IVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGVSDEYSFVFS 1911
+VVRIDGR F +FS +H+F+KPND AL LMN+C+ AVLE+F D++ AYG SDEYSFVF
Sbjct: 71 MVVRIDGRDFSRFSQVHEFEKPNDETALNLMNSCSAAVLEEFPDIIFAYGYSDEYSFVFK 130
Query: 1910 KTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICYPSNKILRDY 1731
KTS F QR YV KW EFFP ++L PSF + + S ++L+ Y
Sbjct: 131 KTSRFYQRRASKILSLVASFFAAVYVTKWKEFFPQRKLLYAPSFSSKVVSCASAEVLQAY 190
Query: 1730 LAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQFGIDYNTLPA 1551
LAWRQ DCH NNQY+TCFWMLVKSGK+ SE Q ILK TQ KN+LL+++FGI+Y TLP
Sbjct: 191 LAWRQQDCHANNQYDTCFWMLVKSGKSVSETQEILKDTQKQQKNELLFQKFGINYKTLPE 250
Query: 1550 MFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCD-IIGESFWKENPHL 1392
+FR+GS +F+ K EE V+H E+G +P+ +++ K + H + I G SFW E P L
Sbjct: 251 LFRQGSCLFKKKVEETVKHDENG-NPVKRLRRKAVFVHSENIAGRSFWNEQPSL 303
>ref|XP_002862851.1| hypothetical protein ARALYDRAFT_920213 [Arabidopsis lyrata subsp.
lyrata] gi|297308599|gb|EFH39109.1| hypothetical protein
ARALYDRAFT_920213 [Arabidopsis lyrata subsp. lyrata]
Length = 525
Score = 306 bits (783), Expect = 2e-80
Identities = 138/245 (56%), Positives = 188/245 (76%)
Frame = -3
Query: 2117 KNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYGV 1938
+++LLP TW+VVRIDG HFH+FS++H+F+KPND +AL LMN+CAVAVLE+F D+ AYGV
Sbjct: 281 ESRLLPLTWVVVRIDGCHFHRFSEVHEFEKPNDEQALKLMNSCAVAVLEEFQDIAFAYGV 340
Query: 1937 SDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAICY 1758
SDEYSFV S +R +YV++W +FFPHK L+ PSFDGRA+CY
Sbjct: 341 SDEYSFVLKNKSELYKRQSSKIISAIVSFFTSTYVMRWGDFFPHKNLKYPPSFDGRAVCY 400
Query: 1757 PSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQF 1578
P++ IL DYLAWRQVDCHINNQYNTCFWMLVKSGK+K++AQ LKGTQT +KN+LL +QF
Sbjct: 401 PTSDILLDYLAWRQVDCHINNQYNTCFWMLVKSGKSKTQAQDYLKGTQTREKNELLIQQF 460
Query: 1577 GIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCDIIGESFWKENP 1398
GI+YN+LP +FR GS +FR K +E V E+G +++ +V++++ +II + FW+++P
Sbjct: 461 GIEYNSLPVIFRLGSSVFRLKTQEGVA-EENGEVSGKQVEAEVVVDYSNIIDQCFWQQHP 519
Query: 1397 HLIAC 1383
H+++C
Sbjct: 520 HILSC 524
Score = 259 bits (661), Expect = 3e-66
Identities = 125/244 (51%), Positives = 168/244 (68%), Gaps = 1/244 (0%)
Frame = -3
Query: 2120 VKNKLLPYTWIVVRIDGRHFHQFSDMHDFDKPNDSKALGLMNACAVAVLEKFTDVVIAYG 1941
V+++++ I++RI GR F +FS +H F+KPND AL LMN+CA AVLE++ D+V AYG
Sbjct: 14 VEDEVMFPNLIIIRIHGRDFSRFSQVHKFEKPNDETALNLMNSCASAVLEEYPDIVFAYG 73
Query: 1940 VSDEYSFVFSKTSHFQQRHGXXXXXXXXXXXXXSYVLKWDEFFPHKELRSTPSFDGRAIC 1761
SDEYSFVF KTS F QR YV KW EFFPH++L PSF +A+
Sbjct: 74 YSDEYSFVFKKTSRFYQRRASKVLSLVASFFAAVYVTKWKEFFPHRKLEYAPSFASKAVS 133
Query: 1760 YPSNKILRDYLAWRQVDCHINNQYNTCFWMLVKSGKTKSEAQSILKGTQTLDKNDLLYKQ 1581
S ++L+ YLAWRQ DCHI+NQY+TCFWMLVKSGKT SE Q ILK TQ +N+LL++Q
Sbjct: 134 CASVEVLQAYLAWRQHDCHISNQYDTCFWMLVKSGKTLSETQEILKDTQKQQRNELLFQQ 193
Query: 1580 FGIDYNTLPAMFRKGSFIFRDKAEEIVQHRESGCDPINKMQMKVIIEHCD-IIGESFWKE 1404
FGI+Y LP +FR+GS +F+ K EE V+H E+G +P+ +++ + + H + I G SFW E
Sbjct: 194 FGINYKMLPVLFRQGSCLFKTKVEETVKHDENG-NPVKRLRRRETLVHSENIAGRSFWNE 252
Query: 1403 NPHL 1392
+ L
Sbjct: 253 HSSL 256