BLASTX nr result

ID: Coptis25_contig00010555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010555
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]   109   5e-22
ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig...   107   1e-21
gb|AAN08220.1| putative chromosome condensation regulator [Oryza...   107   2e-21
gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japo...   107   2e-21

>ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|222873146|gb|EEF10277.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  112 bits (280), Expect = 6e-23
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   GYNEYGQLGRGFTCEGLQGARVLNAYAKCLDEAPELVKIIQVSCGEYHTAAVSENGEL 174
           GYNEYGQLGRGFTCEGLQGARV+NAYAK LDEAPELVKI QVSCGEYHTAA+SE GE+
Sbjct: 190 GYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKITQVSCGEYHTAAISEKGEV 247


>emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
          Length = 461

 Score =  109 bits (272), Expect = 5e-22
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   GYNEYGQLGRGFTCEGLQGARVLNAYAKCLDEAPELVKIIQVSCGEYHTAAVSENGEL 174
           GYNEYGQLGRG TCEGLQGARV+NAY+K L+EAPELVKI QVSCGEYHTAA+SENGE+
Sbjct: 190 GYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYHTAAISENGEV 247


>ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera] gi|298204453|emb|CBI16933.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  107 bits (268), Expect = 1e-21
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = +1

Query: 1   GYNEYGQLGRGFTCEGLQGARVLNAYAKCLDEAPELVKIIQVSCGEYHTAAVSENGEL 174
           GYNEYGQLGRG TCEGLQGARV+NAY+K  +EAPELVKI QVSCGEYHTAA+SENGE+
Sbjct: 190 GYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYHTAAISENGEV 247


>gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
           Group] gi|108709680|gb|ABF97475.1| regulator of
           chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 505

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   GYNEYGQLGRGFTCEGLQGARVLNAYAKCLDEAPELVKIIQVSCGEYHTAAVSENGEL 174
           GYNEYGQLGRG T EGLQGARVLNAYA+ LDEAPELVKI++VSCGEYHTAA+SENGE+
Sbjct: 216 GYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISENGEV 273


>gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
          Length = 581

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   GYNEYGQLGRGFTCEGLQGARVLNAYAKCLDEAPELVKIIQVSCGEYHTAAVSENGEL 174
           GYNEYGQLGRG T EGLQGARVLNAYA+ LDEAPELVKI++VSCGEYHTAA+SENGE+
Sbjct: 292 GYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSCGEYHTAAISENGEV 349


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