BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010539
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloro...   350   4e-94
ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus...   329   7e-88
ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloro...   327   5e-87
ref|NP_567805.1| Ribosomal protein L22p/L17e family protein [Ara...   309   8e-82
ref|NP_564605.2| Ribosomal protein L.2/L17e family protein [Arab...   309   8e-82

>ref|XP_002267832.1| PREDICTED: 50S ribosomal protein L22, chloroplastic [Vitis vinifera]
            gi|296089316|emb|CBI39088.3| unnamed protein product
            [Vitis vinifera]
          Length = 271

 Score =  350 bits (898), Expect = 4e-94
 Identities = 187/270 (69%), Positives = 214/270 (79%), Gaps = 9/270 (3%)
 Frame = -2

Query: 1035 GWQRNLQSIIRNVGKRVE--------LSSFHIDSPSPLGGQYSHLYKTLNPSTTRTIHPF 880
            GWQR+L+++   +GKRVE         S   ++S SPL G+  +L +     +     P+
Sbjct: 3    GWQRHLRNVFTQIGKRVEHNYNVSANFSCSRLES-SPLVGELPYLQRLWKLPSATIPRPY 61

Query: 879  HQYLQQLGISSSRTLLAD-DVKPVASPFAPVLALESGKTDDSQIPVIKRSQVQAILKNIK 703
            + Y QQLGISSSR LLAD DV PVASP  P LAL  GKT+D ++ V K S+VQA+LK IK
Sbjct: 62   YYYFQQLGISSSRQLLADSDVTPVASPLTPALALNGGKTEDQKV-VSKPSKVQAVLKGIK 120

Query: 702  QSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLV 523
            QSPKKVNLVA LVRGMRVEDALLQLQ+TVKRASKTVYQVIHSARANATHNHGLDPDRLLV
Sbjct: 121  QSPKKVNLVAELVRGMRVEDALLQLQLTVKRASKTVYQVIHSARANATHNHGLDPDRLLV 180

Query: 522  AEAFVGKGYFKKRVNYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRKLTK 343
            AEAFVGKG+FKKRV+YHAKGKCGIK RPECRLTVVVREMTPEEEA++A+LRVSNFRKL+K
Sbjct: 181  AEAFVGKGFFKKRVSYHAKGKCGIKVRPECRLTVVVREMTPEEEAKLAKLRVSNFRKLSK 240

Query: 342  RERRLVPHKLIETTPIWNRKGRAAGQVDNA 253
            RE+RLVPH+LIETT IWNRK       D A
Sbjct: 241  REKRLVPHQLIETTSIWNRKANGGVASDMA 270


>ref|XP_002524085.1| 50S ribosomal protein L22, putative [Ricinus communis]
            gi|223536653|gb|EEF38295.1| 50S ribosomal protein L22,
            putative [Ricinus communis]
          Length = 278

 Score =  329 bits (844), Expect = 7e-88
 Identities = 179/271 (66%), Positives = 209/271 (77%), Gaps = 12/271 (4%)
 Frame = -2

Query: 1035 GWQRNLQSIIRNVGKRVE-----LSSFHIDSP----SPLGGQYSHLYKTLNPSTTRTIHP 883
            GWQR+LQ ++R VGKRVE     +S+F   S     S   G    L++     +T     
Sbjct: 3    GWQRHLQFLLRQVGKRVEHNYSAVSNFSSSSSCVESSLKPGDLPCLHRLWKSPSTNISRS 62

Query: 882  FHQYLQQLGISSSRTLLADDVK--PVASPFAPVLA-LESGKTDDSQIPVIKRSQVQAILK 712
            F+QYLQQ GISSSR LLAD  +  P+ SP  P L  L SGKT++ +  + K+S+VQA+LK
Sbjct: 63   FYQYLQQSGISSSRKLLADSSEQTPIRSPLTPALTPLSSGKTEEKKA-ICKQSKVQAVLK 121

Query: 711  NIKQSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDR 532
            NIKQSPKKVNLVA LVRGMRVEDALLQLQVT+KRA+KTVYQVIHSARANATHNHGLDPDR
Sbjct: 122  NIKQSPKKVNLVAELVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDR 181

Query: 531  LLVAEAFVGKGYFKKRVNYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRK 352
            LLVAEAFVGKG FKKR++YHAKG+ G+K R ECRLTVVVRE+TPEEEA++ARLRV NFRK
Sbjct: 182  LLVAEAFVGKGNFKKRISYHAKGRAGVKVRAECRLTVVVREITPEEEAKIARLRVHNFRK 241

Query: 351  LTKRERRLVPHKLIETTPIWNRKGRAAGQVD 259
             TK+E+RLVPHKLIETTPIWNRK   A   +
Sbjct: 242  RTKQEKRLVPHKLIETTPIWNRKKAKAADYE 272


>ref|XP_004139475.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis
            sativus]
          Length = 271

 Score =  327 bits (837), Expect = 5e-87
 Identities = 174/269 (64%), Positives = 211/269 (78%), Gaps = 10/269 (3%)
 Frame = -2

Query: 1035 GWQRNLQSIIRNVGKRVELS-------SFHIDSPSPLGGQYSHLYKTLNPSTTRTIHPFH 877
            GWQR L+S++ ++  +VELS       S+ + S S   G+  +L + L PS+     P  
Sbjct: 3    GWQRCLRSMLGHLQNKVELSYNAASNSSYRLQS-SLSNGELPYLQRLLKPSSAVIAQPDF 61

Query: 876  QYLQQLGISSSRTLLADDVKP-VASPFAPVLALESGKTDDS--QIPVIKRSQVQAILKNI 706
            + LQQ+GISSSR LLAD  +  V+SP    LAL SGK  D   Q  + KRSQVQA+LK I
Sbjct: 62   RCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKGI 121

Query: 705  KQSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLL 526
            KQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRASKTVYQVIHSA+ANATHNHG+D DRLL
Sbjct: 122  KQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRLL 181

Query: 525  VAEAFVGKGYFKKRVNYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRKLT 346
            VAEAFVGKG F+KR++YHAKG+CG++ +PECRLTVV+RE TPEEEA++A+L+VSNFRKLT
Sbjct: 182  VAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKLT 241

Query: 345  KRERRLVPHKLIETTPIWNRKGRAAGQVD 259
            KRE +LVPHKLIETTPIWNRKG+A    +
Sbjct: 242  KREHQLVPHKLIETTPIWNRKGKAKANTE 270


>ref|NP_567805.1| Ribosomal protein L22p/L17e family protein [Arabidopsis thaliana]
            gi|21553938|gb|AAM63019.1| unknown [Arabidopsis thaliana]
            gi|107738381|gb|ABF83687.1| At4g28360 [Arabidopsis
            thaliana] gi|110735706|dbj|BAE99833.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332660073|gb|AEE85473.1| Ribosomal protein L22p/L17e
            family protein [Arabidopsis thaliana]
          Length = 271

 Score =  309 bits (792), Expect = 8e-82
 Identities = 168/273 (61%), Positives = 208/273 (76%), Gaps = 10/273 (3%)
 Frame = -2

Query: 1035 GWQRNLQSIIRNVGKRVELSSF----------HIDSPSPLGGQYSHLYKTLNPSTTRTIH 886
            GW+RNLQ++IR VG+RV+ S            +++SP   G    +L   L PS +    
Sbjct: 3    GWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQG----YLQSLLRPSYSS--R 56

Query: 885  PFHQYLQQLGISSSRTLLADDVKPVASPFAPVLALESGKTDDSQIPVIKRSQVQAILKNI 706
            P + +LQQLGIS+SR L A + +PV+SP +    L SGK ++ +I + KR +VQA+LK+I
Sbjct: 57   PLYHHLQQLGISTSRQLQASE-EPVSSPLSSPALLGSGKEEEQKI-IPKRQKVQAVLKSI 114

Query: 705  KQSPKKVNLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLL 526
            KQSPKKVNLVAALVRGMRVEDAL+QLQVTVKRA++TVY+VIH+ARANATHNHGLDPDRLL
Sbjct: 115  KQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPDRLL 174

Query: 525  VAEAFVGKGYFKKRVNYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRKLT 346
            VAEAFVGKG F K+V YHAKG+ GI   P CRLTV+VRE TPEEEAE+ARL+V NF+K +
Sbjct: 175  VAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFKKKS 234

Query: 345  KRERRLVPHKLIETTPIWNRKGRAAGQVDNALV 247
            KRER+LVPHKLIET+PIWNR+G  A    + LV
Sbjct: 235  KRERQLVPHKLIETSPIWNRRGTKANHRSSELV 267


>ref|NP_564605.2| Ribosomal protein L.2/L17e family protein [Arabidopsis thaliana]
            gi|79319746|ref|NP_001031174.1| Ribosomal protein
            L.2/L17e family protein [Arabidopsis thaliana]
            gi|186490375|ref|NP_001117473.1| Ribosomal protein
            L.2/L17e family protein [Arabidopsis thaliana]
            gi|62321786|dbj|BAD95410.1| chloroplast 50S ribosomal
            protein L22 [Arabidopsis thaliana]
            gi|109946433|gb|ABG48395.1| At1g52370 [Arabidopsis
            thaliana] gi|110742949|dbj|BAE99369.1| putative
            chloroplast 50S ribosomal protein L22 [Arabidopsis
            thaliana] gi|222424158|dbj|BAH20038.1| AT1G52370
            [Arabidopsis thaliana] gi|332194673|gb|AEE32794.1|
            Ribosomal protein L.2/L17e family protein [Arabidopsis
            thaliana] gi|332194674|gb|AEE32795.1| Ribosomal protein
            L.2/L17e family protein [Arabidopsis thaliana]
            gi|332194675|gb|AEE32796.1| Ribosomal protein L.2/L17e
            family protein [Arabidopsis thaliana]
          Length = 269

 Score =  309 bits (792), Expect = 8e-82
 Identities = 166/266 (62%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
 Frame = -2

Query: 1035 GWQRNLQSIIRNVGKRVE---LSSFHIDSPSPLGGQYSHLYKTLNPSTTRTIHPFHQYLQ 865
            GWQ+NLQ +IR VGKRV+   +S+ +  S   L   +S  Y      +T +  P + +LQ
Sbjct: 3    GWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQGYLQSLLRSTYSSRPLYYHLQ 62

Query: 864  QLGISSSRTLLADDVKPVASPFAPVLALESGKTDDSQIPVIKRSQVQAILKNIKQSPKKV 685
            QLGIS+SR L A + +PV+SP +    L SGK ++ +I + KR +VQA+LK+IKQSPKKV
Sbjct: 63   QLGISTSRQLQAGE-EPVSSPLSSPALLGSGKEEEQKI-IPKRQKVQAVLKSIKQSPKKV 120

Query: 684  NLVAALVRGMRVEDALLQLQVTVKRASKTVYQVIHSARANATHNHGLDPDRLLVAEAFVG 505
            NLVAALVRGMRVEDAL+QLQVTVKRAS+TVY+VIH+ARANATHNHGLDPDRLLVAEAFVG
Sbjct: 121  NLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDRLLVAEAFVG 180

Query: 504  KGYFKKRVNYHAKGKCGIKERPECRLTVVVREMTPEEEAEVARLRVSNFRKLTKRERRLV 325
            KG F K+V YHAKG+ GI   P CRLTV+VRE T EEEAE+ARL+V NF+KL KR+R+LV
Sbjct: 181  KGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKKLNKRQRQLV 240

Query: 324  PHKLIETTPIWNRKGRAAGQVDNALV 247
            PHKLIET+PIWNR+G       + LV
Sbjct: 241  PHKLIETSPIWNRRGTKGNHRSSELV 266