BLASTX nr result
ID: Coptis25_contig00010511
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00010511 (203 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol... 117 1e-24 ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple... 117 1e-24 ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple... 115 5e-24 emb|CBI38713.3| unnamed protein product [Vitis vinifera] 115 5e-24 ref|XP_003626606.1| Conserved oligomeric Golgi complex subunit [... 108 3e-22 >ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 4-like [Cucumis sativus] Length = 751 Score = 117 bits (292), Expect = 1e-24 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 3/70 (4%) Frame = -3 Query: 201 LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEIATALNNMDVSGEYVLKLRHEIVE 31 LLSNEYQEALQQKM EP+ KLFLGG GVQKTGTEIATALNNMDVS EYVLKL+HEI E Sbjct: 479 LLSNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEE 538 Query: 30 QCVEVFPAPA 1 QC EVFPAPA Sbjct: 539 QCAEVFPAPA 548 >ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Cucumis sativus] Length = 751 Score = 117 bits (292), Expect = 1e-24 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 3/70 (4%) Frame = -3 Query: 201 LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEIATALNNMDVSGEYVLKLRHEIVE 31 LLSNEYQEALQQKM EP+ KLFLGG GVQKTGTEIATALNNMDVS EYVLKL+HEI E Sbjct: 479 LLSNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEE 538 Query: 30 QCVEVFPAPA 1 QC EVFPAPA Sbjct: 539 QCAEVFPAPA 548 >ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis vinifera] Length = 1105 Score = 115 bits (287), Expect = 5e-24 Identities = 59/70 (84%), Positives = 60/70 (85%), Gaps = 3/70 (4%) Frame = -3 Query: 201 LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEIATALNNMDVSGEYVLKLRHEIVE 31 LL NEYQEALQQKM EP+ KLFLGG GVQKTGTEIATALNNMDVS EYVLKLRHEI E Sbjct: 833 LLGNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLRHEIEE 892 Query: 30 QCVEVFPAPA 1 QC EVFP PA Sbjct: 893 QCAEVFPTPA 902 >emb|CBI38713.3| unnamed protein product [Vitis vinifera] Length = 707 Score = 115 bits (287), Expect = 5e-24 Identities = 59/70 (84%), Positives = 60/70 (85%), Gaps = 3/70 (4%) Frame = -3 Query: 201 LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEIATALNNMDVSGEYVLKLRHEIVE 31 LL NEYQEALQQKM EP+ KLFLGG GVQKTGTEIATALNNMDVS EYVLKLRHEI E Sbjct: 435 LLGNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLRHEIEE 494 Query: 30 QCVEVFPAPA 1 QC EVFP PA Sbjct: 495 QCAEVFPTPA 504 >ref|XP_003626606.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi|87240849|gb|ABD32707.1| Conserved oligomeric Golgi complex component 4, related [Medicago truncatula] gi|355501621|gb|AES82824.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula] Length = 747 Score = 108 bits (271), Expect = 3e-22 Identities = 55/70 (78%), Positives = 59/70 (84%), Gaps = 3/70 (4%) Frame = -3 Query: 201 LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEIATALNNMDVSGEYVLKLRHEIVE 31 LLSNEY EALQQK+ EP+ KLF GG GVQKTGT+IA ALNNMDVS EYVLKL+HEI E Sbjct: 475 LLSNEYHEALQQKIREPNLGAKLFFGGVGVQKTGTDIAAALNNMDVSSEYVLKLKHEIEE 534 Query: 30 QCVEVFPAPA 1 QC EVFPAPA Sbjct: 535 QCAEVFPAPA 544