BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010509
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   196   2e-48
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  199 bits (505), Expect = 3e-49
 Identities = 100/124 (80%), Positives = 109/124 (87%)
 Frame = +1

Query: 1   VYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVKS 180
           VYVRGGLFEKSR+LL ELE LGYA DEMPYCLLMDGLAK+  + EAKSIF EM  K VKS
Sbjct: 320 VYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVKS 379

Query: 181 DGYSDSIMISAYCRSGLLHEAKQLARDFEARHERYDLVMLNTMLRAYCKAGEMESVMQML 360
           DGY  SIMISA+CRSGLL EAKQLARDFEA +++YDLVMLNTML AYC+AGEMESVMQM+
Sbjct: 380 DGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVMLNTMLCAYCRAGEMESVMQMM 439

Query: 361 RKMD 372
           RKMD
Sbjct: 440 RKMD 443


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  196 bits (498), Expect = 2e-48
 Identities = 95/124 (76%), Positives = 113/124 (91%)
 Frame = +1

Query: 1   VYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVKS 180
           VYVRGGLFEKS+QLLLELETLGYA DEMPYCLLMDGL+KAG V+EA+S F+EM  K+VKS
Sbjct: 331 VYVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKS 390

Query: 181 DGYSDSIMISAYCRSGLLHEAKQLARDFEARHERYDLVMLNTMLRAYCKAGEMESVMQML 360
           DGY+ SIMISAYCR  LL EAKQLA++FEA++++YD+V+LNTML AYC+AG+MESVMQ +
Sbjct: 391 DGYAYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTM 450

Query: 361 RKMD 372
           RKMD
Sbjct: 451 RKMD 454


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/124 (75%), Positives = 111/124 (89%)
 Frame = +1

Query: 1   VYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVKS 180
           VYVRGGLFEKSR+LL ELE+LGY  +EMPYCLLMDGLAKAG + EAK++F+EM  K+VK+
Sbjct: 322 VYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKT 381

Query: 181 DGYSDSIMISAYCRSGLLHEAKQLARDFEARHERYDLVMLNTMLRAYCKAGEMESVMQML 360
           DGY+ SIMISA+CR GLL EAK LA+DFEA ++RYD+V+LNTML AYC+AGEMESVMQML
Sbjct: 382 DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQML 441

Query: 361 RKMD 372
           RKMD
Sbjct: 442 RKMD 445


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/124 (68%), Positives = 108/124 (87%)
 Frame = +1

Query: 1   VYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVKS 180
           VYVRGGLFEKSR LL+EL+TLG+A++EMPYCLLMDGLAK G ++EA+S+FNEM  K VKS
Sbjct: 223 VYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKS 282

Query: 181 DGYSDSIMISAYCRSGLLHEAKQLARDFEARHERYDLVMLNTMLRAYCKAGEMESVMQML 360
            GYS SIMIS++CR GL  EAK+LA +FEA++++YD+V+LNT+L AYC+ GE ESVM+ +
Sbjct: 283 GGYSYSIMISSFCRGGLFEEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTM 342

Query: 361 RKMD 372
           RKMD
Sbjct: 343 RKMD 346


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/124 (66%), Positives = 104/124 (83%)
 Frame = +1

Query: 1   VYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVKS 180
           VYV+GGLFEKSR+LL EL++LGYA DEMPYC+ MDGLAKAG ++EAK IF+EM+   V+S
Sbjct: 290 VYVKGGLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRS 349

Query: 181 DGYSDSIMISAYCRSGLLHEAKQLARDFEARHERYDLVMLNTMLRAYCKAGEMESVMQML 360
           DGY+ SIMISA+CR+ L  EAKQLA+DFE    +YDLV+LN+ML A+C+ GEME VM+ L
Sbjct: 350 DGYAHSIMISAFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETL 409

Query: 361 RKMD 372
           +KMD
Sbjct: 410 KKMD 413