BLASTX nr result

ID: Coptis25_contig00010502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010502
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535867.1| PREDICTED: probable protein phosphatase 2C 4...   101   7e-20
gb|ACU18892.1| unknown [Glycine max]                                  101   7e-20
ref|XP_003518652.1| PREDICTED: probable protein phosphatase 2C 4...   100   1e-19
gb|AFK34786.1| unknown [Lotus japonicus]                               99   3e-19
ref|XP_003591337.1| hypothetical protein MTR_1g086350 [Medicago ...    99   5e-19

>ref|XP_003535867.1| PREDICTED: probable protein phosphatase 2C 49-like [Glycine max]
          Length = 396

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 6/67 (8%)
 Frame = -1

Query: 216 ERTRMEECGGYIDDGYLNSVLSVTRALGDWDMKLSKGSPSPLIAEPDIRQILL------L 55
           ER R+EE GGYI+DGYLN VLSVTRALGDWDMKL KG+PSPLIAEP+ RQ++L      L
Sbjct: 239 ERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLTDDDEFL 298

Query: 54  IMGCDGI 34
           I+GCDGI
Sbjct: 299 IIGCDGI 305


>gb|ACU18892.1| unknown [Glycine max]
          Length = 396

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 6/67 (8%)
 Frame = -1

Query: 216 ERTRMEECGGYIDDGYLNSVLSVTRALGDWDMKLSKGSPSPLIAEPDIRQILL------L 55
           ER R+EE GGYI+DGYLN VLSVTRALGDWDMKL KG+PSPLIAEP+ RQ++L      L
Sbjct: 239 ERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVVLTDDDEFL 298

Query: 54  IMGCDGI 34
           I+GCDGI
Sbjct: 299 IIGCDGI 305


>ref|XP_003518652.1| PREDICTED: probable protein phosphatase 2C 49-like [Glycine max]
          Length = 396

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/67 (73%), Positives = 55/67 (82%), Gaps = 6/67 (8%)
 Frame = -1

Query: 216 ERTRMEECGGYIDDGYLNSVLSVTRALGDWDMKLSKGSPSPLIAEPDIRQILL------L 55
           ER R+EE GGYI+DGYLN VLSVTRALGDWDMKL KG+PSPLIAEP+ RQ+ L      L
Sbjct: 239 ERRRVEELGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQVALTDDDEFL 298

Query: 54  IMGCDGI 34
           I+GCDGI
Sbjct: 299 IIGCDGI 305


>gb|AFK34786.1| unknown [Lotus japonicus]
          Length = 396

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 6/67 (8%)
 Frame = -1

Query: 216 ERTRMEECGGYIDDGYLNSVLSVTRALGDWDMKLSKGSPSPLIAEPDIRQILL------L 55
           ER R+E+ GGYI+DGYLN VLSVTRALGDWDMKL KG+PSPLIAEP+ RQ++L      L
Sbjct: 240 ERRRVEDLGGYIEDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPEFRQMVLTEDDEFL 299

Query: 54  IMGCDGI 34
           I+GCDGI
Sbjct: 300 IIGCDGI 306


>ref|XP_003591337.1| hypothetical protein MTR_1g086350 [Medicago truncatula]
           gi|355480385|gb|AES61588.1| hypothetical protein
           MTR_1g086350 [Medicago truncatula]
          Length = 288

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 6/67 (8%)
 Frame = -1

Query: 216 ERTRMEECGGYIDDGYLNSVLSVTRALGDWDMKLSKGSPSPLIAEPDIRQILL------L 55
           ER R+EE GGY++DGYLN VLSVTRALGDWDMKL +G+PSPLIA+P+ RQ++L      L
Sbjct: 131 ERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGTPSPLIADPEFRQVVLTEDDEFL 190

Query: 54  IMGCDGI 34
           I+GCDGI
Sbjct: 191 IIGCDGI 197


Top