BLASTX nr result

ID: Coptis25_contig00010469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010469
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70591.1| hypothetical protein VITISV_026735 [Vitis vinifera]   103   2e-20
ref|XP_002279256.1| PREDICTED: uncharacterized protein LOC100242...   102   6e-20
ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|2...   102   8e-20
gb|ABK95862.1| unknown [Populus trichocarpa]                          102   8e-20
ref|XP_002882841.1| hypothetical protein ARALYDRAFT_478773 [Arab...   100   3e-19

>emb|CAN70591.1| hypothetical protein VITISV_026735 [Vitis vinifera]
          Length = 234

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = +2

Query: 278 DVLRWGKNIDSGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAAS 457
           DVLRWGKNI S KTRT KRAGVAVYNRASSLETLVGYLYLT+  RLE++M KLGF+T AS
Sbjct: 158 DVLRWGKNIGSAKTRTKKRAGVAVYNRASSLETLVGYLYLTDVNRLEEVMRKLGFSTDAS 217

Query: 458 NRLIMEEPQNK 490
            +L ++E  +K
Sbjct: 218 TQLGLQETDSK 228


>ref|XP_002279256.1| PREDICTED: uncharacterized protein LOC100242891 [Vitis vinifera]
           gi|297743076|emb|CBI35943.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  102 bits (254), Expect = 6e-20
 Identities = 52/72 (72%), Positives = 59/72 (81%)
 Frame = +2

Query: 278 DVLRWGKNIDSGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAAS 457
           DVLRWGKNI S KTRT KRAGVAVYNRASSLETLVGYLYLT+  RLE++M KLGF+T AS
Sbjct: 162 DVLRWGKNIGSAKTRTKKRAGVAVYNRASSLETLVGYLYLTDVNRLEEVMRKLGFSTDAS 221

Query: 458 NRLIMEEPQNKS 493
            +L ++E    S
Sbjct: 222 TQLGLQETDTGS 233


>ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|222839723|gb|EEE78046.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  102 bits (253), Expect = 8e-20
 Identities = 48/71 (67%), Positives = 61/71 (85%)
 Frame = +2

Query: 281 VLRWGKNIDSGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASN 460
           +LRWGKN+ S KTRT +R GVAVYNRASSLETLVG+LYLTN +RLE++M+KLGF+T +S 
Sbjct: 174 ILRWGKNVGSTKTRTKRRVGVAVYNRASSLETLVGFLYLTNVSRLEEVMLKLGFSTDSST 233

Query: 461 RLIMEEPQNKS 493
           ++I EE  +KS
Sbjct: 234 QMIPEEENSKS 244


>gb|ABK95862.1| unknown [Populus trichocarpa]
          Length = 246

 Score =  102 bits (253), Expect = 8e-20
 Identities = 48/71 (67%), Positives = 61/71 (85%)
 Frame = +2

Query: 281 VLRWGKNIDSGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASN 460
           +LRWGKN+ S KTRT +R GVAVYNRASSLETLVG+LYLTN +RLE++M+KLGF+T +S 
Sbjct: 174 ILRWGKNVGSTKTRTKRRVGVAVYNRASSLETLVGFLYLTNVSRLEEVMLKLGFSTDSST 233

Query: 461 RLIMEEPQNKS 493
           ++I EE  +KS
Sbjct: 234 QMIPEEENSKS 244


>ref|XP_002882841.1| hypothetical protein ARALYDRAFT_478773 [Arabidopsis lyrata subsp.
           lyrata] gi|297328681|gb|EFH59100.1| hypothetical protein
           ARALYDRAFT_478773 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/83 (59%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
 Frame = +2

Query: 278 DVLRWGKNIDSGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAAS 457
           D+LRWGKN+ S +TRT +RAG AVYN+ASSLETL+GYLYLTN  RLE +M KLGF++ +S
Sbjct: 158 DILRWGKNLGSARTRTRRRAGNAVYNKASSLETLIGYLYLTNGKRLEKIMQKLGFSSDSS 217

Query: 458 NRLIMEEPQNK-SK*NLMNLIVS 523
             +++EE + K S+ NL N I++
Sbjct: 218 TEIVIEEAKPKPSESNLSNFILN 240


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