BLASTX nr result

ID: Coptis25_contig00010274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010274
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD97861.1| NADH-dependent hydroxypyruvate reductase [Pachysa...   428   e-117
ref|XP_002305524.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
gb|ABK96544.1| unknown [Populus trichocarpa x Populus deltoides]      424   e-116
ref|XP_002279281.1| PREDICTED: glycerate dehydrogenase [Vitis vi...   421   e-115
emb|CAN65023.1| hypothetical protein VITISV_020147 [Vitis vinifera]   421   e-115

>gb|ABD97861.1| NADH-dependent hydroxypyruvate reductase [Pachysandra terminalis]
          Length = 303

 Score =  428 bits (1100), Expect = e-117
 Identities = 211/233 (90%), Positives = 220/233 (94%)
 Frame = -3

Query: 1328 AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF 1149
            AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF
Sbjct: 64   AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF 123

Query: 1148 VTAYGEFLKANGEQPVTWKRAASMEEVLREGDLISLHPILDKTTYHLINKDRLAIMKKEA 969
            VTAYGEFLKANGE PVTWKRA+SMEEVLRE D+ISLHPILDKTTYHLINK+RL++MKKEA
Sbjct: 124  VTAYGEFLKANGEPPVTWKRASSMEEVLREADVISLHPILDKTTYHLINKERLSMMKKEA 183

Query: 968  ILINCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 789
            IL+NCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNA+VVPHIASASK
Sbjct: 184  ILVNCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAIVVPHIASASK 243

Query: 788  WTREGMATLAALNVLGKIKGYPVWSNANNVEPFLNENXXXXXXXXSIVNAKTL 630
            WTREGMATLAALNVLGKIKGYPVWS+ N VEPFLN+N        SIVNAK L
Sbjct: 244  WTREGMATLAALNVLGKIKGYPVWSDPNRVEPFLNKNSPPPAASPSIVNAKAL 296


>ref|XP_002305524.1| predicted protein [Populus trichocarpa] gi|222848488|gb|EEE86035.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  424 bits (1089), Expect = e-116
 Identities = 209/233 (89%), Positives = 217/233 (93%)
 Frame = -3

Query: 1328 AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF 1149
            AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMM+EGFKMNLIYYDLYQ+TRLEKF
Sbjct: 147  AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKF 206

Query: 1148 VTAYGEFLKANGEQPVTWKRAASMEEVLREGDLISLHPILDKTTYHLINKDRLAIMKKEA 969
            VTAYGEFLKANGEQPVTWKRAASM+EVLRE D+ISLHPILDKTTYHLINK+ LA MKKEA
Sbjct: 207  VTAYGEFLKANGEQPVTWKRAASMDEVLREADVISLHPILDKTTYHLINKESLATMKKEA 266

Query: 968  ILINCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 789
            IL+NCSRGPVVDEVALVEHLK+NPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK
Sbjct: 267  ILVNCSRGPVVDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 326

Query: 788  WTREGMATLAALNVLGKIKGYPVWSNANNVEPFLNENXXXXXXXXSIVNAKTL 630
            WTREGMATLAALNVLGKIKGYPVW + N V PFLNEN        SIVNAK L
Sbjct: 327  WTREGMATLAALNVLGKIKGYPVWGDPNRVAPFLNENAPPPAASPSIVNAKAL 379


>gb|ABK96544.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 386

 Score =  424 bits (1089), Expect = e-116
 Identities = 209/233 (89%), Positives = 217/233 (93%)
 Frame = -3

Query: 1328 AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF 1149
            AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMM+EGFKMNLIYYDLYQ+TRLEKF
Sbjct: 147  AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKF 206

Query: 1148 VTAYGEFLKANGEQPVTWKRAASMEEVLREGDLISLHPILDKTTYHLINKDRLAIMKKEA 969
            VTAYGEFLKANGEQPVTWKRAASM+EVLRE D+ISLHPILDKTTYHLINK+ LA MKKEA
Sbjct: 207  VTAYGEFLKANGEQPVTWKRAASMDEVLREADVISLHPILDKTTYHLINKESLATMKKEA 266

Query: 968  ILINCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 789
            IL+NCSRGPVVDEVALVEHLK+NPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK
Sbjct: 267  ILVNCSRGPVVDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 326

Query: 788  WTREGMATLAALNVLGKIKGYPVWSNANNVEPFLNENXXXXXXXXSIVNAKTL 630
            WTREGMATLAALNVLGKIKGYPVW + N V PFLNEN        SIVNAK L
Sbjct: 327  WTREGMATLAALNVLGKIKGYPVWGDPNQVAPFLNENAPPPAASPSIVNAKAL 379


>ref|XP_002279281.1| PREDICTED: glycerate dehydrogenase [Vitis vinifera]
            gi|297744600|emb|CBI37862.3| unnamed protein product
            [Vitis vinifera]
          Length = 386

 Score =  421 bits (1083), Expect = e-115
 Identities = 204/233 (87%), Positives = 219/233 (93%)
 Frame = -3

Query: 1328 AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF 1149
            AGLYDGWLPHLFVGNLL+GQTVGVIGAGRIGSAYARMM+EGFKMNLIYYDLYQATRLEKF
Sbjct: 147  AGLYDGWLPHLFVGNLLRGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF 206

Query: 1148 VTAYGEFLKANGEQPVTWKRAASMEEVLREGDLISLHPILDKTTYHLINKDRLAIMKKEA 969
            VTAYG+FLKA+GEQPVTWKRAASM+EVLRE DLISLHP+LDKTTYHL+NK+RL++MKKEA
Sbjct: 207  VTAYGQFLKASGEQPVTWKRAASMDEVLREADLISLHPVLDKTTYHLVNKERLSMMKKEA 266

Query: 968  ILINCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 789
            ILINCSRGPV+DEVALV HLKENPMFRVGLDVFEDEPYMKPGLA+MKNA+VVPHIASASK
Sbjct: 267  ILINCSRGPVIDEVALVAHLKENPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASK 326

Query: 788  WTREGMATLAALNVLGKIKGYPVWSNANNVEPFLNENXXXXXXXXSIVNAKTL 630
            WTREGMATLAALNVLGKIKGYP+W + N VEPFLNEN        SIVNAK L
Sbjct: 327  WTREGMATLAALNVLGKIKGYPIWHDPNKVEPFLNENSLPPAASPSIVNAKAL 379


>emb|CAN65023.1| hypothetical protein VITISV_020147 [Vitis vinifera]
          Length = 386

 Score =  421 bits (1083), Expect = e-115
 Identities = 204/233 (87%), Positives = 219/233 (93%)
 Frame = -3

Query: 1328 AGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMIEGFKMNLIYYDLYQATRLEKF 1149
            AGLYDGWLPHLFVGNLL+GQTVGVIGAGRIGSAYARMM+EGFKMNLIYYDLYQATRLEKF
Sbjct: 147  AGLYDGWLPHLFVGNLLRGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF 206

Query: 1148 VTAYGEFLKANGEQPVTWKRAASMEEVLREGDLISLHPILDKTTYHLINKDRLAIMKKEA 969
            VTAYG+FLKA+GEQPVTWKRAASM+EVLRE DLISLHP+LDKTTYHL+NK+RL++MKKEA
Sbjct: 207  VTAYGQFLKASGEQPVTWKRAASMDEVLREADLISLHPVLDKTTYHLVNKERLSMMKKEA 266

Query: 968  ILINCSRGPVVDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLADMKNAVVVPHIASASK 789
            ILINCSRGPV+DEVALV HLKENPMFRVGLDVFEDEPYMKPGLA+MKNA+VVPHIASASK
Sbjct: 267  ILINCSRGPVIDEVALVAHLKENPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASK 326

Query: 788  WTREGMATLAALNVLGKIKGYPVWSNANNVEPFLNENXXXXXXXXSIVNAKTL 630
            WTREGMATLAALNVLGKIKGYP+W + N VEPFLNEN        SIVNAK L
Sbjct: 327  WTREGMATLAALNVLGKIKGYPIWHDPNKVEPFLNENSLPPAASPSIVNAKAL 379


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