BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00010146
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   281   4e-74
ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   278   4e-73
ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|2...   277   6e-73
ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   276   2e-72
ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor ...   272   2e-71

>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  281 bits (719), Expect = 4e-74
 Identities = 131/164 (79%), Positives = 146/164 (89%)
 Frame = +3

Query: 3   HLDAVSCMAKNPKYLKGIFSGSMDGDICLWDMASRRTVRQFPGHQGAVRGLTASTDGRLL 182
           H+DAVSCMAKNP YLKGIFSGSMDGDI LWD+A+RRTV QFPGHQGAVRGLTASTDG  L
Sbjct: 65  HIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASTDGSTL 124

Query: 183 VSCGVDCTVRLWNVPVEDIMESDDSSDRYSEPLAVYVQNNAFWAVDHQWDGEQFATAGAQ 362
           VSCG DCTVRLWNVPV  IM+SD+ SD  SEP AVY+  NAFWAVDHQW+G+ FATAGAQ
Sbjct: 125 VSCGTDCTVRLWNVPVATIMDSDNLSDCSSEPRAVYMGENAFWAVDHQWNGDLFATAGAQ 184

Query: 363 IDIWNHNRSEPVSSFRWGNDTVTSVRFNPGQPNLLVTSSRDRSI 494
           +DIWNHNRS+PV+SF+WG D+V SVRFNPG+PNLLVTS+ DRSI
Sbjct: 185 VDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLVTSASDRSI 228


>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
           nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis]
          Length = 452

 Score =  278 bits (710), Expect = 4e-73
 Identities = 127/165 (76%), Positives = 141/165 (85%)
 Frame = +3

Query: 3   HLDAVSCMAKNPKYLKGIFSGSMDGDICLWDMASRRTVRQFPGHQGAVRGLTASTDGRLL 182
           H+DA+SCMAKNP YLKGIFSGSMDGDI LWD+ASRRTV QFPGHQGAVRGLTASTDG +L
Sbjct: 65  HIDAISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTDGCIL 124

Query: 183 VSCGVDCTVRLWNVPVEDIMESDDSSDRYSEPLAVYVQNNAFWAVDHQWDGEQFATAGAQ 362
           +SCG DCT RLW VPV  +MESD  S+R +EP A+YV  NAFW VDHQWDGE FAT GAQ
Sbjct: 125 ISCGTDCTARLWKVPVATMMESDGPSNRSAEPQAIYVGKNAFWGVDHQWDGELFATGGAQ 184

Query: 363 IDIWNHNRSEPVSSFRWGNDTVTSVRFNPGQPNLLVTSSRDRSIT 497
           +DIWNHNRS+PV+SF WG DTV SVRFNPG+PNLL  S+ DRSIT
Sbjct: 185 VDIWNHNRSQPVNSFEWGTDTVISVRFNPGEPNLLAASASDRSIT 229


>ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|222853313|gb|EEE90860.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  277 bits (709), Expect = 6e-73
 Identities = 129/164 (78%), Positives = 144/164 (87%)
 Frame = +3

Query: 3   HLDAVSCMAKNPKYLKGIFSGSMDGDICLWDMASRRTVRQFPGHQGAVRGLTASTDGRLL 182
           H+DAVSCMAKNP YLKGIFSGSMDGDI LWD+A+RRTV +FPGHQGAVRGLTASTDG  L
Sbjct: 65  HIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCRFPGHQGAVRGLTASTDGSTL 124

Query: 183 VSCGVDCTVRLWNVPVEDIMESDDSSDRYSEPLAVYVQNNAFWAVDHQWDGEQFATAGAQ 362
           VSCG DCTVRLWNVPV  IMES +SSD  SEP AVY+  NA+WAVDHQW G+ FATAGAQ
Sbjct: 125 VSCGTDCTVRLWNVPVATIMESGNSSDCSSEPRAVYMGENAYWAVDHQWSGDLFATAGAQ 184

Query: 363 IDIWNHNRSEPVSSFRWGNDTVTSVRFNPGQPNLLVTSSRDRSI 494
           +DIWNHNRS+PV+SF+WG D+V SVRFNPG+PNLL TS+ DRSI
Sbjct: 185 VDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLATSASDRSI 228


>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
           gi|302143337|emb|CBI21898.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  276 bits (705), Expect = 2e-72
 Identities = 124/164 (75%), Positives = 145/164 (88%)
 Frame = +3

Query: 3   HLDAVSCMAKNPKYLKGIFSGSMDGDICLWDMASRRTVRQFPGHQGAVRGLTASTDGRLL 182
           H+D++SCMAKNP YLKGIFSGSMDGDI LWD+ASRRTV QFPGHQGAVRGLTASTDGR+L
Sbjct: 65  HIDSISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTDGRIL 124

Query: 183 VSCGVDCTVRLWNVPVEDIMESDDSSDRYSEPLAVYVQNNAFWAVDHQWDGEQFATAGAQ 362
           VSCG DCTVRLWNVPV  I +SDDSSD   +PLAV+V  NAFW VDHQWDG  FATAGAQ
Sbjct: 125 VSCGTDCTVRLWNVPVATISDSDDSSDNSMKPLAVHVWKNAFWGVDHQWDGNLFATAGAQ 184

Query: 363 IDIWNHNRSEPVSSFRWGNDTVTSVRFNPGQPNLLVTSSRDRSI 494
           +DIW+HNRS+PV++F+WGND+V +VRFNPG+P++L  S+ DRS+
Sbjct: 185 VDIWDHNRSQPVNTFQWGNDSVIAVRFNPGEPDILAASASDRSL 228


>ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Glycine max]
          Length = 452

 Score =  272 bits (695), Expect = 2e-71
 Identities = 122/164 (74%), Positives = 141/164 (85%)
 Frame = +3

Query: 3   HLDAVSCMAKNPKYLKGIFSGSMDGDICLWDMASRRTVRQFPGHQGAVRGLTASTDGRLL 182
           H+DAVSCM +NP  LKGIFS SMDGDI LWD+A+RRTV QFPGH+GAVRGLTASTDGR+L
Sbjct: 65  HVDAVSCMTRNPSQLKGIFSSSMDGDIRLWDLAARRTVCQFPGHRGAVRGLTASTDGRIL 124

Query: 183 VSCGVDCTVRLWNVPVEDIMESDDSSDRYSEPLAVYVQNNAFWAVDHQWDGEQFATAGAQ 362
           VSCG DCT+RLW+VP+  +MESDDS+    EP +VYV  NAFW  DHQWDGE FATAGAQ
Sbjct: 125 VSCGTDCTIRLWSVPITTLMESDDSTKSTVEPASVYVWKNAFWGADHQWDGEHFATAGAQ 184

Query: 363 IDIWNHNRSEPVSSFRWGNDTVTSVRFNPGQPNLLVTSSRDRSI 494
           +DIWNHNRS+P++SF WG+DTV SVRFNPG+PNLL TS+ DRSI
Sbjct: 185 VDIWNHNRSQPINSFEWGSDTVISVRFNPGEPNLLATSASDRSI 228