BLASTX nr result

ID: Coptis25_contig00009996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009996
         (1582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19797.3| unnamed protein product [Vitis vinifera]              335   3e-89
ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinif...   319   1e-84
ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|2...   312   2e-82
ref|XP_002510479.1| conserved hypothetical protein [Ricinus comm...   311   4e-82
ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sat...   296   1e-77

>emb|CBI19797.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  335 bits (858), Expect = 3e-89
 Identities = 195/401 (48%), Positives = 246/401 (61%), Gaps = 47/401 (11%)
 Frame = -3

Query: 1064 IRKEILELGFPDDGYNYLLHLREIKNSGAGSAYYENTKAKLDHQLSLDVKAYDASRVNVS 885
            +R+EILELGFPDDGYNYL HLREIKN+G GSA+Y N+KA+LD QL LDVK YDASRV++ 
Sbjct: 70   VRREILELGFPDDGYNYLTHLREIKNTGGGSAFYHNSKARLD-QLPLDVKGYDASRVHIG 128

Query: 884  GIAEDFNDNSIYGVAAKTVGVKIHKVVDPEVSALLDYDSDMSRFGSDVEDLEEDFVVQAN 705
             +  D ++ ++Y VA KTVGV++ K VDPEV+ALLD  S  S FGSDVEDLEEDFV+QAN
Sbjct: 129  DVKRDPDEKALYSVAEKTVGVRLQKAVDPEVAALLD--SKDSVFGSDVEDLEEDFVIQAN 186

Query: 704  VLGGGLDE-------KINVNEECIXXXXXXXXXXXLQEESK----------FVEEKPRVR 576
            +   G D+       K +V+E                +E +           + E+PRV 
Sbjct: 187  IHEEGKDDFIGKKLTKEDVDESYTQEPQEDPVEFVGHDEIRNQFVGAGDDIIISEEPRVH 246

Query: 575  RLLDEQFDMLTLQEYETESDSELDGSVVAEDESLADKLIFSLKGHVKDELELDGKYKVPA 396
            RLLDEQFD L   EY TESD +  GSV  + ESLADKL  +LK H  D+LEL+ KY+VPA
Sbjct: 247  RLLDEQFDQLERMEYGTESDDDYGGSVAEDYESLADKLNHALKDHATDDLELNEKYRVPA 306

Query: 395  DIMRENEGSKNGEAGESAAKLIRRCVEYGEMCDN--XXXXXXXXXXXXXXXXLWDCETIV 222
            D++ + EG K+  + +S+A +IRRCVEY E  +N                   WDCETIV
Sbjct: 307  DLLHDKEGLKDSGSLDSSADVIRRCVEYAEKYENEDPNEDVVVLEESSDESGGWDCETIV 366

Query: 221  STYSNLDNHPGKIEVPRI----------------GTHVITLRGKQKLPVD---------- 120
            STYSNLDNHPGKIE P I                  HVI LRGK+KLPVD          
Sbjct: 367  STYSNLDNHPGKIEAPEITRKKKLVETVSGPLSATNHVIPLRGKEKLPVDFLPRGKKPST 426

Query: 119  -NVKEARGSRFDKLKKKRHGDESKEEKNERK-SVKQQGVES 3
               K+    R ++ K+K+HG E K+EK ERK +VK++  E+
Sbjct: 427  EKAKDVSSLRAEQQKRKKHGQEEKKEKKERKTAVKEERREA 467


>ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinifera]
          Length = 576

 Score =  319 bits (818), Expect = 1e-84
 Identities = 195/436 (44%), Positives = 247/436 (56%), Gaps = 82/436 (18%)
 Frame = -3

Query: 1064 IRKEILELGFPDDGYNYLLHLREIKNSGAGSAYYENTKAKLDHQLSLDVKAYDASRVNVS 885
            +R+EILELGFPDDGYNYL HLREIKN+G GSA+Y N+KA+LD QL LDVK YDASRV++ 
Sbjct: 111  VRREILELGFPDDGYNYLTHLREIKNTGGGSAFYHNSKARLD-QLPLDVKGYDASRVHIG 169

Query: 884  GIAEDFNDNSIYGVAAKTVGVKIHKVVDPEVSALLDYDSDMSRFGSDVEDLEEDFVVQAN 705
             +  D ++ ++Y VA KTVGV++ K VDPEV+ALL  DS  S FGSDVEDLEEDFV+QAN
Sbjct: 170  DVKRDPDEKALYSVAEKTVGVRLQKAVDPEVAALL--DSKDSVFGSDVEDLEEDFVIQAN 227

Query: 704  VLGGGLDE-------KINVNEECIXXXXXXXXXXXLQEESK----------FVEEKPRVR 576
            +   G D+       K +V+E                +E +           + E+PRV 
Sbjct: 228  IHEEGKDDFIGKKLTKEDVDESYTQEPQEDPVEFVGHDEIRNQFVGAGDDIIISEEPRVH 287

Query: 575  RLLDEQFDMLTL-----------------------------------QEYETESDSELDG 501
            RLLDEQFD +T                                     EY TESD +  G
Sbjct: 288  RLLDEQFDQITFILYSRFQAIVEGIKADNEICLQYAGLHFSLPTLERMEYGTESDDDYGG 347

Query: 500  SVVAEDESLADKLIFSLKGHVKDELELDGKYKVPADIMRENEGSKNGEAGESAAKLIRRC 321
            SV  + ESLADKL  +LK H  D+LEL+ KY+VPAD++ + EG K+  + +S+A +IRRC
Sbjct: 348  SVAEDYESLADKLNHALKDHATDDLELNEKYRVPADLLHDKEGLKDSGSLDSSADVIRRC 407

Query: 320  VEYGEMCDN--XXXXXXXXXXXXXXXXLWDCETIVSTYSNLDNHPGKIEVPRI------- 168
            VEY E  +N                   WDCETIVSTYSNLDNHPGKIE P I       
Sbjct: 408  VEYAEKYENEDPNEDVVVLEESSDESGGWDCETIVSTYSNLDNHPGKIEAPEITRKKKLV 467

Query: 167  ---------GTHVITLRGKQKLPVD-----------NVKEARGSRFDKLKKKRHGDESKE 48
                       HVI LRGK+KLPVD             K+    R ++ K+K+HG E K+
Sbjct: 468  ETVSGPLSATNHVIPLRGKEKLPVDFLPRGKKPSTEKAKDVSSLRAEQQKRKKHGQEEKK 527

Query: 47   EKNERK-SVKQQGVES 3
            EK ERK +VK++  E+
Sbjct: 528  EKKERKTAVKEERREA 543


>ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|222856354|gb|EEE93901.1|
            predicted protein [Populus trichocarpa]
          Length = 502

 Score =  312 bits (799), Expect = 2e-82
 Identities = 192/385 (49%), Positives = 240/385 (62%), Gaps = 31/385 (8%)
 Frame = -3

Query: 1064 IRKEILELGFPDDGYNYLLHLREIKNSGAGSAYYENTKAKLDHQLSLDVKAYDASRVNVS 885
            +R+EILELGFPDDGYNYLLHLREIK++  GS +++N KAKL+ QL  DVKAYDASR+ VS
Sbjct: 105  VRREILELGFPDDGYNYLLHLREIKSTVNGSGFFQNPKAKLN-QLPHDVKAYDASRLKVS 163

Query: 884  GI-AEDFNDNSIYGVAAKTVGVKIHKVVDPEVSALLDYDSDMSRFGSDVEDLEEDFVVQA 708
             + +ED ND SIY VA+K+VGV++ K VDPEV+ALLD DSD+SRFGSDVEDLEEDFVV  
Sbjct: 164  ELKSEDRNDKSIYHVASKSVGVRVQKAVDPEVAALLD-DSDLSRFGSDVEDLEEDFVVLD 222

Query: 707  NVLGGGLDEKINVNEECIXXXXXXXXXXXLQEESKFVEEKPRVRRLLDEQFDMLTLQEYE 528
                 G+++ IN   E                   F +EK RVRR LDEQFD+L  QEY 
Sbjct: 223  R---SGVEKAINAPVEV---------------RGDFGDEKQRVRRPLDEQFDLLESQEYG 264

Query: 527  TESDS-ELDGSVVAEDESLADKLIFSLKGHVKDELELDGKYKVPADIMRENEGSKNGEAG 351
            T+ +  E DG +  EDE LA KL  +L  H  D+LELD KY+VPAD++  N+  K+ E  
Sbjct: 265  TDGEGDEYDGYIAEEDEFLAGKLKHALNDHAVDDLELDEKYEVPADLLHGNDRPKDKELL 324

Query: 350  ESAAKLIRRCVEYGEMCDN--XXXXXXXXXXXXXXXXLWDCETIVSTYSNLDNHPGKIEV 177
            ESAA +IRRC EYG+  +N                   WDCETIVSTYSNLDNHP KI  
Sbjct: 325  ESAAAVIRRCREYGKKYENEDEDKEVIIEEESSDESEKWDCETIVSTYSNLDNHPVKIGA 384

Query: 176  P----------------RIGTHVITLRGKQKLPVD----------NVKEARGSRFDKLKK 75
            P                   +HVI L GK+KLPVD           VK A   + ++ K+
Sbjct: 385  PETARKKMLSKAVIGALNASSHVIALGGKEKLPVDFLPRRKPAAEKVKGAPSLQVEQQKR 444

Query: 74   KRHGDESKEEKNERK-SVKQQGVES 3
            K+ G E+K+EK ERK +VK++  E+
Sbjct: 445  KQQGQETKDEKKERKAAVKEEKREA 469


>ref|XP_002510479.1| conserved hypothetical protein [Ricinus communis]
            gi|223551180|gb|EEF52666.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 515

 Score =  311 bits (796), Expect = 4e-82
 Identities = 193/391 (49%), Positives = 225/391 (57%), Gaps = 41/391 (10%)
 Frame = -3

Query: 1064 IRKEILELGFPDDGYNYLLHLREIKNSGAGSAYYENTKAKLDHQLSLDVKAYDASRVNVS 885
            +RKEILELGFPDDGYNYLLHLREIKN+G GS YY N KA  D QL  DVKAYDASRV VS
Sbjct: 107  VRKEILELGFPDDGYNYLLHLREIKNTGGGSYYYRNPKASFD-QLPHDVKAYDASRVRVS 165

Query: 884  GI-AEDFNDNSIYGVAAKTVGVKIHKVVDPEVSALLDYDSDMSRFGSDVEDLEEDFVVQA 708
             +  +D ND SIY VA+KTVGVK+ KV DPEV+ALLD DSD+SRFGSDVEDLEEDFVV+A
Sbjct: 166  EVKRDDTNDKSIYSVASKTVGVKVQKVFDPEVAALLD-DSDLSRFGSDVEDLEEDFVVRA 224

Query: 707  NVLGGGLDEKINV----------NEECIXXXXXXXXXXXLQEESKFVEEKPRVRRLLDEQ 558
            NV     D K+N+          N+E              +  +    EK RVRRLLDEQ
Sbjct: 225  NVPEDDNDNKLNLIDQANEHVPGNQEAAVDNVIVEKEEKEEVGNDLPGEKQRVRRLLDEQ 284

Query: 557  FDMLTLQEYET-ESDSELDGSVVAEDESLADKLIFSLKGHVKDELELDGKYKVPADIMRE 381
            FD+L  QEY T + D + DG    EDESLA++L   L     D+ EL  KY+VP      
Sbjct: 285  FDLLECQEYGTDDEDDDYDGYYAEEDESLANRLNLVLINRAMDDTELSDKYEVP------ 338

Query: 380  NEGSKNGEAGESAAKLIRRCVEYGEMCDN--XXXXXXXXXXXXXXXXLWDCETIVSTYSN 207
                           +I RCVEY +  +N                   WDCETIVSTYSN
Sbjct: 339  ------------PMDVIHRCVEYAQKYENEDGDADLVVVEESSDESEQWDCETIVSTYSN 386

Query: 206  LDNHPGKIEVP----------------RIGTHVITLRGKQKLPVDNVKEARGSRFDK--- 84
            LDNHP KIE P                    HVITLRGK+KLPVD +   R S  +K   
Sbjct: 387  LDNHPAKIEAPGTARKKKLAETVSGALNAKAHVITLRGKEKLPVDFLPRGRKSDAEKMKS 446

Query: 83   --------LKKKRHGDESKEEKNERKSVKQQ 15
                    LK+K+HG ESKEEK ERK+  ++
Sbjct: 447  VPELKAEPLKRKQHGQESKEEKKERKAAMKK 477


>ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sativus]
            gi|449512941|ref|XP_004164184.1| PREDICTED: protein LTV1
            homolog [Cucumis sativus]
          Length = 540

 Score =  296 bits (758), Expect = 1e-77
 Identities = 186/399 (46%), Positives = 239/399 (59%), Gaps = 53/399 (13%)
 Frame = -3

Query: 1064 IRKEILELGFPDDGYNYLLHLREIKNSGAGSAYYENTKAKLDHQLSLDVKAYDASRVNVS 885
            +RK+ILELGFPDDGYNYLLHLREIKN+G GS +Y+N KAKL +Q+  D KAYDASR+ VS
Sbjct: 106  VRKDILELGFPDDGYNYLLHLREIKNTGGGSTFYQNPKAKL-NQVPRDEKAYDASRMIVS 164

Query: 884  GIAEDFNDNSIYGVAAKTVGVKIHKVVDPEVSALLDYDSDMSRFGSDVEDLEEDFVVQAN 705
             +  D ++N+ Y VA+K VGV++  VVDPE++ALLD D D+SRFGSDVEDLEEDFVVQAN
Sbjct: 165  KMNVDADENA-YKVASKIVGVRVQNVVDPEIAALLD-DDDLSRFGSDVEDLEEDFVVQAN 222

Query: 704  VLGGGLD----EKINVNEE-------CIXXXXXXXXXXXLQEESKFVEE--------KPR 582
            +   G D     KI+V E+        +              + + +EE        KPR
Sbjct: 223  LCEDGEDGTTNSKISVVEDDERTAGSLLVNNKSFGDHIFEDADMEHLEEAVDGSDVDKPR 282

Query: 581  VRRLLDEQFDMLTLQEYETESDSELDGS------VVAEDESLADKLIFSLKGHVKDELEL 420
             RRLLD+QFD L  ++Y   + S+ DG+      +  E+ESLA KL  +L  H KD+LEL
Sbjct: 283  TRRLLDDQFDTLLNRDY---ASSDSDGTDCDEPCIAEEEESLAQKLNHALGNHSKDDLEL 339

Query: 419  DGKYKVPADIMRENEGSKNGEAGESAAKLIRRCVEYGEMC---DNXXXXXXXXXXXXXXX 249
            +  YK PADI+   EG+++ E  +SA+ +I RC+EY E     D+               
Sbjct: 340  EQGYKAPADILSGKEGAEDKELLQSASDVIHRCMEYAEKYQNEDDGIEDEFVFDESSDES 399

Query: 248  XLWDCETIVSTYSNLDNHPGKIEVPRI----------------GTHVITLRGKQKLP--- 126
             +WDCETIVST SNL+NHPGKI  P +                   VITLRGK+KLP   
Sbjct: 400  EVWDCETIVSTCSNLNNHPGKIMAPEMTRRKKLAETVTGALNSNNPVITLRGKEKLPVNF 459

Query: 125  ------VDNVKEARGSRFDKLKKKRHGDESKEEKNERKS 27
                  VD VK+    R +  K+K HG ESKEEK ERK+
Sbjct: 460  LPHGRKVDKVKDTSNLRTEPQKRKSHGQESKEEKKERKA 498


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