BLASTX nr result

ID: Coptis25_contig00009993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009993
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263248.2| PREDICTED: uncharacterized protein LOC100264...    65   2e-08
emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]    60   6e-07
ref|XP_002280044.1| PREDICTED: uncharacterized protein LOC100250...    59   2e-06
ref|XP_002527148.1| conserved hypothetical protein [Ricinus comm...    58   2e-06
emb|CBI37655.3| unnamed protein product [Vitis vinifera]               57   5e-06

>ref|XP_002263248.2| PREDICTED: uncharacterized protein LOC100264584 [Vitis vinifera]
          Length = 306

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = -1

Query: 817 DWSQSRQLSHGKQETPRQ-QIPVKGLKGFSAFAHIPGASLNPYPSGGPSLPISLGKPIDA 641
           D+ +SRQL   K + P+Q Q+      GFS F+ IP A      SG PS+PI LGKP++ 
Sbjct: 120 DYPESRQLGQ-KGDIPQQAQMKEPKGAGFSTFSSIPAAPTTT-SSGVPSVPIPLGKPVNG 177

Query: 640 FPVRDLNHQANSPAVIPLDSQKEDDQHFMERFHLLKAFLKSYDNSSHEEYIQT 482
                  H ANS      +SQ   + H+ ER   L+A+LK  D+S+ E Y+QT
Sbjct: 178 ------PHGANSEVSCSENSQDVANMHWGERLIQLEAYLKDCDHSNQEAYVQT 224


>emb|CAN75365.1| hypothetical protein VITISV_030645 [Vitis vinifera]
          Length = 511

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = -1

Query: 805 SRQLSHGKQETPRQQIPVKGLKGFSA--FAHIPGASLNPYPSGGPSLPISLGKPIDAFPV 632
           S Q     Q+ P QQ  +K    + A  FA IP ASL  +  G PS+P+S+GKP +    
Sbjct: 187 STQFCQNMQQIPZQQTQMKDRNAYCAPAFAPIPLASLVTFAFGEPSVPLSMGKPSNELLD 246

Query: 631 RDLNH-QANSPAVIPLDSQKEDDQHFMERFHLLKAFLKSYDNSSHEEYIQT 482
            + N+ +  S     + S++ DDQ   ERF  L+  LK  D     +YIQT
Sbjct: 247 VESNYLKVTSEVPHSVHSKETDDQQRKERFLRLQKVLKQCDEFDQNDYIQT 297


>ref|XP_002280044.1| PREDICTED: uncharacterized protein LOC100250489 [Vitis vinifera]
          Length = 290

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
 Frame = -1

Query: 805 SRQLSHGKQETPRQQIPVKGLKGFSA--FAHIPGASLNPYPSGGPSLPISLGKPIDAFPV 632
           S Q     Q+ P+QQ  +K    + A  FA IP ASL  +  G PS+P+S+GKP +    
Sbjct: 120 STQFCQNMQQIPQQQTQMKDRNAYCAPAFAPIPLASLVTFAFGEPSVPLSMGKPSNELLD 179

Query: 631 RDLNH-QANSPAVIPLDSQKEDDQHFMERFHLLKAFLKSYDNSSHEEYIQ 485
            + N+ +  S     + S++ DDQ   ERF  L+  LK  D     +YIQ
Sbjct: 180 VESNYLKVTSEVPHSVHSKETDDQQRKERFLRLQKVLKQCDEFDQNDYIQ 229


>ref|XP_002527148.1| conserved hypothetical protein [Ricinus communis]
           gi|223533487|gb|EEF35230.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 297

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = -1

Query: 826 IMVDWSQSRQLSHGKQETPRQQIPVKGLKGFSAFAHIPGASLNPYPSGGPSLPISLGKPI 647
           I VD   SRQL   +   P+ QI    +  F A+A +P ASL    SG  S+P+ +G   
Sbjct: 124 INVDCVNSRQLDQAEIMQPKPQIKEAKVSFFPAYAPMPVASLTN-ASGNSSVPLPIGNSS 182

Query: 646 DAFPVRDLNHQANSPAVIPLDSQKE-DDQHFMERFHLLKAFLKSYDNSSHEEYIQ 485
             F   + N+   + A+  L++ K   + H+ ER+H L+  LK  D S  E+Y+Q
Sbjct: 183 TRFLSTEPNYHPVASAISLLNNLKGMKNLHWEERYHQLQILLKKLDESDQEDYVQ 237


>emb|CBI37655.3| unnamed protein product [Vitis vinifera]
          Length = 146

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 35/85 (41%), Positives = 47/85 (55%)
 Frame = -1

Query: 739 GFSAFAHIPGASLNPYPSGGPSLPISLGKPIDAFPVRDLNHQANSPAVIPLDSQKEDDQH 560
           GFS F+ IP A      SG PS+PI LGKP++        H ANS      +SQ   + H
Sbjct: 8   GFSTFSSIPAAPTTT-SSGVPSVPIPLGKPVNG------PHGANSEVSCSENSQDVANMH 60

Query: 559 FMERFHLLKAFLKSYDNSSHEEYIQ 485
           + ER   L+A+LK  D+S+ E Y+Q
Sbjct: 61  WGERLIQLEAYLKDCDHSNQEAYVQ 85


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