BLASTX nr result

ID: Coptis25_contig00009989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009989
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521712.1| undecaprenyl diphosphate synthase, putative ...   233   4e-59
emb|CBI37101.3| unnamed protein product [Vitis vinifera]              229   3e-58
ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synth...   229   3e-58
emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]   229   3e-58
gb|AFK37712.1| unknown [Lotus japonicus]                              227   2e-57

>ref|XP_002521712.1| undecaprenyl diphosphate synthase, putative [Ricinus communis]
           gi|223539103|gb|EEF40699.1| undecaprenyl diphosphate
           synthase, putative [Ricinus communis]
          Length = 381

 Score =  233 bits (593), Expect = 4e-59
 Identities = 111/168 (66%), Positives = 134/168 (79%)
 Frame = -1

Query: 505 FLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYCYELGV 326
           F+R C+FR+LSVGPIPNHIAFIMDGNRRYA+K N+ EG GHR GF AL+S+LKYCYELGV
Sbjct: 19  FMRICMFRILSVGPIPNHIAFIMDGNRRYAKKENMKEGAGHRAGFSALISILKYCYELGV 78

Query: 325 KYVTVYAFSIDNFRRKPQEVESVMNLMQDKIEDLLKEESIVKSFGVRVHFVGNLQLLRES 146
           KYVTVYAFSIDNF+R+P EV+ +M+LM +KIE+LLKEESIV  +G+RV+F+GNL LL E 
Sbjct: 79  KYVTVYAFSIDNFKRRPDEVQDLMDLMLEKIEELLKEESIVNQYGIRVYFIGNLTLLNEP 138

Query: 145 VRLXXXXXXXXXAKNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQ 2
           VR+         A N KC   +CIAY+S DEIVHAVQE+   +R E Q
Sbjct: 139 VRIAAEKVMRATANNTKCTFLICIAYTSCDEIVHAVQESCKFKRQEFQ 186


>emb|CBI37101.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  229 bits (585), Expect = 3e-58
 Identities = 112/173 (64%), Positives = 142/173 (82%)
 Frame = -1

Query: 520 KNMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 341
           +N+  FLRKCIF VLSVGPIPNHIAFIMDGNRR+A+K N+ EG GH+VG+LALMSML+Y 
Sbjct: 14  ENLGTFLRKCIFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYS 73

Query: 340 YELGVKYVTVYAFSIDNFRRKPQEVESVMNLMQDKIEDLLKEESIVKSFGVRVHFVGNLQ 161
           YELGVKYVT+YAFSI+NF+R+P+EV+SVM+LMQ+KIE L+ EESI+  FGVRVHF+GNL+
Sbjct: 74  YELGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLK 133

Query: 160 LLRESVRLXXXXXXXXXAKNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQ 2
           LL   VRL         A N K VL +C+AY+ST+EI+HAV+E+  ++  EI+
Sbjct: 134 LLSAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIR 186


>ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 1
           [Vitis vinifera] gi|359480265|ref|XP_003632424.1|
           PREDICTED: dehydrodolichyl diphosphate synthase 6-like
           isoform 2 [Vitis vinifera]
          Length = 290

 Score =  229 bits (585), Expect = 3e-58
 Identities = 112/173 (64%), Positives = 142/173 (82%)
 Frame = -1

Query: 520 KNMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 341
           +N+  FLRKCIF VLSVGPIPNHIAFIMDGNRR+A+K N+ EG GH+VG+LALMSML+Y 
Sbjct: 14  ENLGTFLRKCIFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYS 73

Query: 340 YELGVKYVTVYAFSIDNFRRKPQEVESVMNLMQDKIEDLLKEESIVKSFGVRVHFVGNLQ 161
           YELGVKYVT+YAFSI+NF+R+P+EV+SVM+LMQ+KIE L+ EESI+  FGVRVHF+GNL+
Sbjct: 74  YELGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLK 133

Query: 160 LLRESVRLXXXXXXXXXAKNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQ 2
           LL   VRL         A N K VL +C+AY+ST+EI+HAV+E+  ++  EI+
Sbjct: 134 LLSAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIR 186


>emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
          Length = 384

 Score =  229 bits (585), Expect = 3e-58
 Identities = 112/173 (64%), Positives = 142/173 (82%)
 Frame = -1

Query: 520 KNMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 341
           +N+  FLRKCIF VLSVGPIPNHIAFIMDGNRR+A+K N+ EG GH+VG+LALMSML+Y 
Sbjct: 108 ENLGTFLRKCIFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYS 167

Query: 340 YELGVKYVTVYAFSIDNFRRKPQEVESVMNLMQDKIEDLLKEESIVKSFGVRVHFVGNLQ 161
           YELGVKYVT+YAFSI+NF+R+P+EV+SVM+LMQ+KIE L+ EESI+  FGVRVHF+GNL+
Sbjct: 168 YELGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLK 227

Query: 160 LLRESVRLXXXXXXXXXAKNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQ 2
           LL   VRL         A N K VL +C+AY+ST+EI+HAV+E+  ++  EI+
Sbjct: 228 LLSAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIR 280


>gb|AFK37712.1| unknown [Lotus japonicus]
          Length = 196

 Score =  227 bits (579), Expect = 2e-57
 Identities = 104/173 (60%), Positives = 140/173 (80%)
 Frame = -1

Query: 520 KNMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 341
           + +C +LR+C+F +LSVGP+PNHIAFIMDGNRRYA+K N+ EG GHR GF AL+S+L+YC
Sbjct: 14  EGLCCYLRRCVFAILSVGPVPNHIAFIMDGNRRYAKKRNLGEGDGHRAGFAALLSILRYC 73

Query: 340 YELGVKYVTVYAFSIDNFRRKPQEVESVMNLMQDKIEDLLKEESIVKSFGVRVHFVGNLQ 161
           YEL V+YVTVYAFSIDNF+RKP+EVE+ M LM++KIE+LL++ESI+  +GVR+HF+GNLQ
Sbjct: 74  YELRVRYVTVYAFSIDNFKRKPKEVETFMELMREKIEELLQQESIINEYGVRLHFIGNLQ 133

Query: 160 LLRESVRLXXXXXXXXXAKNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQ 2
           LL + VR          A N + VL +C+AY+S DEIVHAV+E+  ++ +E+Q
Sbjct: 134 LLADPVRHAVEKAMRVTAHNKERVLLICVAYTSRDEIVHAVEESCKDKWNEVQ 186


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