BLASTX nr result

ID: Coptis25_contig00009987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009987
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322676.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002335846.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002530355.1| conserved hypothetical protein [Ricinus comm...   119   2e-25
ref|XP_002322677.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241...   114   8e-24

>ref|XP_002322676.1| predicted protein [Populus trichocarpa] gi|222867306|gb|EEF04437.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = +1

Query: 1   LEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELRFSMYSWLRDQGVKSPQLSLHTYIT 180
           LE KIDFLVN + YP SYLV FP YL+YT+ERVELR +MY+WL+DQG   P LSL T I+
Sbjct: 477 LEMKIDFLVNKVGYPVSYLVTFPSYLNYTMERVELRLAMYNWLKDQGKSVPMLSLSTVIS 536

Query: 181 YTDEMFIRRLVNHHPRGPEVWENMKSK 261
            +D+ FI   VN HPRGPE+W+N+K +
Sbjct: 537 LSDKKFINEYVNSHPRGPEIWQNLKKE 563


>ref|XP_002335846.1| predicted protein [Populus trichocarpa] gi|222835772|gb|EEE74207.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = +1

Query: 1   LEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELRFSMYSWLRDQGVKSPQLSLHTYIT 180
           LE KIDFLVN + YP SYLV FP YL+YT+ERVELR +MY+WL+DQG   P LSL T I+
Sbjct: 172 LEMKIDFLVNKVGYPVSYLVTFPSYLNYTMERVELRLAMYNWLKDQGKSVPMLSLSTVIS 231

Query: 181 YTDEMFIRRLVNHHPRGPEVWENMKSK 261
            +D+ FI   VN HPRGPE+W+N+K +
Sbjct: 232 LSDKKFINEYVNSHPRGPEIWQNLKKE 258


>ref|XP_002530355.1| conserved hypothetical protein [Ricinus communis]
           gi|223530102|gb|EEF32016.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 573

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/89 (59%), Positives = 69/89 (77%)
 Frame = +1

Query: 1   LEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELRFSMYSWLRDQGVKSPQLSLHTYIT 180
           LE+KIDFLVNGL YPASYLV FP YL+YTI RV+LR SMY+WL++QG    +L+L T I 
Sbjct: 484 LEKKIDFLVNGLGYPASYLVNFPSYLNYTIVRVKLRLSMYTWLKEQGTIDSKLALSTVIA 543

Query: 181 YTDEMFIRRLVNHHPRGPEVWENMKSKHC 267
             + +F+ + V HHPRGP VW+++K+K C
Sbjct: 544 CAENLFVEQYVKHHPRGPVVWQDLKNKIC 572


>ref|XP_002322677.1| predicted protein [Populus trichocarpa] gi|222867307|gb|EEF04438.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = +1

Query: 1   LEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELRFSMYSWLRDQGVKSPQLSLHTYIT 180
           LE KIDFLVN + YP SYLV FP YL++T +RVELR +MY+WL+DQG   P LSL + I+
Sbjct: 477 LEMKIDFLVNKVGYPVSYLVTFPSYLNFTTQRVELRLAMYNWLKDQGKSVPMLSLRSLIS 536

Query: 181 YTDEMFIRRLVNHHPRGPEVWENMKSK 261
            +D+ FI   VN HPRGPE+W+N+K +
Sbjct: 537 LSDKKFINEYVNSHPRGPEIWQNLKKE 563


>ref|XP_002275246.1| PREDICTED: uncharacterized protein LOC100241837 [Vitis vinifera]
           gi|147864060|emb|CAN83222.1| hypothetical protein
           VITISV_031366 [Vitis vinifera]
           gi|297739852|emb|CBI30034.3| unnamed protein product
           [Vitis vinifera]
          Length = 589

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = +1

Query: 1   LEQKIDFLVNGLRYPASYLVEFPKYLSYTIERVELRFSMYSWLRDQGVKSPQLSLHTYIT 180
           +E KID+L++ L YP S LV FP YLSYT ERVELR SMY+WL+DQGV  P L+L T I 
Sbjct: 499 IEMKIDYLIHALGYPISSLVTFPSYLSYTTERVELRMSMYNWLKDQGVAEPNLALSTIIA 558

Query: 181 YTDEMFIRRLVNHHPRGPEVWENMKSK 261
            +D  FI R VN HP+G E+WE +K K
Sbjct: 559 CSDNYFIDRYVNRHPKGAEIWEKLKQK 585


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