BLASTX nr result
ID: Coptis25_contig00009984
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009984
(1704 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t... 880 0.0
gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ... 876 0.0
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ... 870 0.0
ref|XP_002519806.1| serine hydroxymethyltransferase, putative [R... 854 0.0
ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ... 845 0.0
>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
gi|222855489|gb|EEE93036.1| serine
hydroxymethyltransferase 8 [Populus trichocarpa]
Length = 529
Score = 880 bits (2275), Expect = 0.0
Identities = 432/529 (81%), Positives = 477/529 (90%)
Frame = +3
Query: 66 MHAYSGAAVTGAVQQPIWTKGSAFPFKGNINGELSFQVKVDFVKPCKASYIKGSLVTGRP 245
M A SGAAV G++QQP+ +KG AFP K ++ +QVK++ VKPC+AS ++GSLVTGRP
Sbjct: 1 MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60
Query: 246 SSSASVPIPEFEGDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSRAVME 425
SS SVPIPE D + F DYGL E DPEV +I KEK RQFKSLELIASENFTSRAVME
Sbjct: 61 PSSVSVPIPETGADISSFKDYGLGEADPEVLEIINKEKDRQFKSLELIASENFTSRAVME 120
Query: 426 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPA 605
AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ+RAL++++LDGKKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180
Query: 606 NFAVYTALLSPHDRIMGLDLPHGGHLSHGFMTLKRRVSATSKYFESMPYRLDESTGLIDY 785
NF VYTALL PHDRIMGLDLPHGGHLSHGFMT KRRVS TS YFESMPYRLDESTGL+DY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
Query: 786 EMLEKTAILFRPKLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVAN 965
+MLEKTAILFRPKL+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLVAASVVA+
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300
Query: 966 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGL 1145
PFEYCDVVTTTTHKSLRGPRGGMIFFKKD VLGVD+ES+INNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360
Query: 1146 AVCLKHAQSPEFKAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGAR 1325
AVCLKHAQSPEFKAYQ QV+ N +ALA+R++ELGY+LVSGGSDNHL+LVDLRPLG+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420
Query: 1326 AEKILDMASITLNKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIA 1505
EKILDMASITLNKNSVPGDKSA +PGGIRIG+PAMTTR FTE EF+A AD IHEG+QI+
Sbjct: 421 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQIS 480
Query: 1506 LEAKKSTKGSKLQDFINSIGSPDFYLNDRISDLQRRVEAFTTQFPLPGI 1652
LEAKKS GSKLQDF+ + SPDF L D++SDLQRRVEA TTQFP+PG+
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529
>gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]
Length = 529
Score = 876 bits (2264), Expect = 0.0
Identities = 429/529 (81%), Positives = 478/529 (90%)
Frame = +3
Query: 66 MHAYSGAAVTGAVQQPIWTKGSAFPFKGNINGELSFQVKVDFVKPCKASYIKGSLVTGRP 245
M A SGAAV G++QQP+ +KG AFP K ++ +QVK++ VKPC+AS ++GSLVTGRP
Sbjct: 1 MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60
Query: 246 SSSASVPIPEFEGDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSRAVME 425
SS SVPIPE D + F DYGL+E DPEV +I KEK RQFKSLELIASENFTSRAVME
Sbjct: 61 PSSVSVPIPETGADISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVME 120
Query: 426 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPA 605
AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ+RAL++++LDGKKWGVNVQPLSGSPA
Sbjct: 121 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180
Query: 606 NFAVYTALLSPHDRIMGLDLPHGGHLSHGFMTLKRRVSATSKYFESMPYRLDESTGLIDY 785
NF VYTALL PHDRIMGLDLPHGGHLSHGFMT KRRVS TS YFESMPYRLDESTGL+DY
Sbjct: 181 NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240
Query: 786 EMLEKTAILFRPKLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVAN 965
+MLEKTAILFRPKL+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLV ASVVA+
Sbjct: 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVPASVVAD 300
Query: 966 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGL 1145
PFEYCDVVTTTTHKSLRGPRGGMIFFKKD VLGVD+ES+INNAVFPGLQGGPHNHTIGGL
Sbjct: 301 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360
Query: 1146 AVCLKHAQSPEFKAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGAR 1325
AVCLKHAQSPEFKAYQ QV+ N +ALA+R++ELGY+LVSGGSDNHL+LVDLRPLG+DGAR
Sbjct: 361 AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420
Query: 1326 AEKILDMASITLNKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIA 1505
EKILD+ASITLNKNSVPGDKSA +PGGIRIG+PAMTTR FTE+EF+A AD IHEG+QI+
Sbjct: 421 VEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQIS 480
Query: 1506 LEAKKSTKGSKLQDFINSIGSPDFYLNDRISDLQRRVEAFTTQFPLPGI 1652
LEAKKS GSKLQDF+ + SPDF L D++SDL+RRVEA TTQFP+PG+
Sbjct: 481 LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529
>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
product [Vitis vinifera]
Length = 528
Score = 870 bits (2249), Expect = 0.0
Identities = 431/529 (81%), Positives = 473/529 (89%)
Frame = +3
Query: 66 MHAYSGAAVTGAVQQPIWTKGSAFPFKGNINGELSFQVKVDFVKPCKASYIKGSLVTGRP 245
M A SG A G++QQPIW KGS+F G+ Q+K++ VKPC+ SYIKGSLVTG+P
Sbjct: 1 MQACSGTAAMGSLQQPIWIKGSSFAPNGSTVNGFPHQIKLNSVKPCR-SYIKGSLVTGKP 59
Query: 246 SSSASVPIPEFEGDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSRAVME 425
SS SV +P F+D+GL E DPEV ++I KEKQRQ KSLELIASENFTSRAVME
Sbjct: 60 PSSVSVTVPGNGDSGVNFIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVME 119
Query: 426 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPA 605
AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RAL+A+HLDGKKWGVNVQPLSGSPA
Sbjct: 120 AVGSCLTNKYSEGLPGKRYYGGNEFIDELETLCQKRALAAFHLDGKKWGVNVQPLSGSPA 179
Query: 606 NFAVYTALLSPHDRIMGLDLPHGGHLSHGFMTLKRRVSATSKYFESMPYRLDESTGLIDY 785
NF VYTALL+PHDRIMGLDLPHGGHLSHGFMT KRRVS TS YFESMPYRLDESTGL+DY
Sbjct: 180 NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 239
Query: 786 EMLEKTAILFRPKLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVAN 965
+MLEKTA LFRPKL+I GASAYPRDFDYPR+RKIAD VGAFLMMDMAHISGLVAASVVA+
Sbjct: 240 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADGVGAFLMMDMAHISGLVAASVVAD 299
Query: 966 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGL 1145
PFEYCD+VTTTTHKSLRGPRGGMIFFKKD+VLGVDLES+INNAVFPGLQGGPHNHTIGGL
Sbjct: 300 PFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359
Query: 1146 AVCLKHAQSPEFKAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGAR 1325
+VCLKHAQSPEFKAYQNQVVSNC+ALA RLIELGY LVSGGSDNHL+LVDLRPLG+DGAR
Sbjct: 360 SVCLKHAQSPEFKAYQNQVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGIDGAR 419
Query: 1326 AEKILDMASITLNKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIA 1505
AEKILDMASITLNKNSVPGDKSA +PGGIRIG+PAMTTR F+EKEFIA ADFIHEG+Q++
Sbjct: 420 AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLS 479
Query: 1506 LEAKKSTKGSKLQDFINSIGSPDFYLNDRISDLQRRVEAFTTQFPLPGI 1652
LEAKKS GSKL DF+ + SPDF L DR+SDLQRRVE TTQFP+PG+
Sbjct: 480 LEAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL 528
>ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223541045|gb|EEF42602.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 527
Score = 854 bits (2206), Expect = 0.0
Identities = 421/529 (79%), Positives = 464/529 (87%)
Frame = +3
Query: 66 MHAYSGAAVTGAVQQPIWTKGSAFPFKGNINGELSFQVKVDFVKPCKASYIKGSLVTGRP 245
M +GA V G++QQP+W KGS+ P K + Q+K++ +PC+ I+GSLV GRP
Sbjct: 1 MQGCTGAQVMGSLQQPVWIKGSSLPLKQSNFVGFPHQIKLNSFRPCRYLNIQGSLVAGRP 60
Query: 246 SSSASVPIPEFEGDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSRAVME 425
SS SVP E EGD + F DYGL+E DPEV +I KEK RQFKSLELIASENFTSRAVME
Sbjct: 61 PSSVSVP--EIEGDRSSFKDYGLSEADPEVREIIEKEKNRQFKSLELIASENFTSRAVME 118
Query: 426 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPA 605
AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RAL+A+ LD KKWGVNVQPLSGSPA
Sbjct: 119 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALAAFGLDRKKWGVNVQPLSGSPA 178
Query: 606 NFAVYTALLSPHDRIMGLDLPHGGHLSHGFMTLKRRVSATSKYFESMPYRLDESTGLIDY 785
NF VYTALL+PHDRIMGLDLPHGGHLSHGFMT KRRVS TS YFESMPYRLDESTGL+DY
Sbjct: 179 NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 238
Query: 786 EMLEKTAILFRPKLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVAN 965
+MLEKTA LFRPKL+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLVAASVV +
Sbjct: 239 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGD 298
Query: 966 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGL 1145
PFEYCD+VTTTTHKSLRGPRGGMIFF+KDT+LGVDLES+INNAVFPGLQGGPHNHTIGGL
Sbjct: 299 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDTILGVDLESAINNAVFPGLQGGPHNHTIGGL 358
Query: 1146 AVCLKHAQSPEFKAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGAR 1325
AVCLKHAQSPEFKAYQ QV+SNC+ALA RL+ELGY+LVSGGSDNHLVLVDLRPLG+DGAR
Sbjct: 359 AVCLKHAQSPEFKAYQKQVISNCRALAYRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 418
Query: 1326 AEKILDMASITLNKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIA 1505
EKILDMASITLNKNSVPGDKSA +PGGIRIG+PAMTTR FTE+EFIA ADFIHEG+QI
Sbjct: 419 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFIATADFIHEGVQIT 478
Query: 1506 LEAKKSTKGSKLQDFINSIGSPDFYLNDRISDLQRRVEAFTTQFPLPGI 1652
EAKKS GSKLQDF+ + SPDF L +SDLQ RVEA TQF +PG+
Sbjct: 479 TEAKKSVSGSKLQDFMKLVASPDFSLASEVSDLQTRVEALATQFSIPGV 527
>ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
[Cucumis sativus] gi|449519543|ref|XP_004166794.1|
PREDICTED: serine hydroxymethyltransferase,
mitochondrial-like [Cucumis sativus]
Length = 528
Score = 845 bits (2182), Expect = 0.0
Identities = 415/529 (78%), Positives = 468/529 (88%)
Frame = +3
Query: 66 MHAYSGAAVTGAVQQPIWTKGSAFPFKGNINGELSFQVKVDFVKPCKASYIKGSLVTGRP 245
M A SG AV G++Q + KGS FP K + Q K++ +KPCK+ ++ S+V G+P
Sbjct: 1 MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60
Query: 246 SSSASVPIPEFEGDENGFVDYGLAEVDPEVHSLIGKEKQRQFKSLELIASENFTSRAVME 425
SSS SV +PE G N FVD+ L+E DPEV S+I KEKQRQFKSLELIASENFTSRAVME
Sbjct: 61 SSSVSVTVPEIGGVSN-FVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 119
Query: 426 AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALSAYHLDGKKWGVNVQPLSGSPA 605
AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQQRAL+A+HLD KWGVNVQPLSGSPA
Sbjct: 120 AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 179
Query: 606 NFAVYTALLSPHDRIMGLDLPHGGHLSHGFMTLKRRVSATSKYFESMPYRLDESTGLIDY 785
NF VYTA+L+PHDRIMGLDLPHGGHLSHGFMT KRRVS TS YFESMPYRLDE+TG++DY
Sbjct: 180 NFEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 239
Query: 786 EMLEKTAILFRPKLMIVGASAYPRDFDYPRVRKIADAVGAFLMMDMAHISGLVAASVVAN 965
+MLEKTA LFRPKL+I GASAYPRDFDYPR+RKIADAVGAFLMMDMAHISGLVAASVVA+
Sbjct: 240 DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 299
Query: 966 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESSINNAVFPGLQGGPHNHTIGGL 1145
PFEYCD+VTTTTHKSLRGPRGGMIFF+KD VLGVDLES+INNAVFPGLQGGPHNHTIGGL
Sbjct: 300 PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359
Query: 1146 AVCLKHAQSPEFKAYQNQVVSNCKALASRLIELGYELVSGGSDNHLVLVDLRPLGMDGAR 1325
AVCLKHAQSPEFK YQN+V++NC+ALA+RL+ELGY+LVSGGSDNHLVLVDLRPLG+DGAR
Sbjct: 360 AVCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 419
Query: 1326 AEKILDMASITLNKNSVPGDKSAQIPGGIRIGTPAMTTRKFTEKEFIAIADFIHEGIQIA 1505
EKILDMASITLNKNSVPGDKSA +PGGIRIG+PAMTTR FTEKEF+A+ADFIHEG++I
Sbjct: 420 VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 479
Query: 1506 LEAKKSTKGSKLQDFINSIGSPDFYLNDRISDLQRRVEAFTTQFPLPGI 1652
L+AK GSKLQ+F+ + + DF L DRISDL+ RVEA TTQFP+PG+
Sbjct: 480 LDAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528