BLASTX nr result

ID: Coptis25_contig00009980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009980
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]   180   3e-43
ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41

>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
          Length = 1183

 Score =  180 bits (456), Expect = 3e-43
 Identities = 89/200 (44%), Positives = 127/200 (63%)
 Frame = +3

Query: 69  SVNTRMMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAEWKKLDRKAIGYI 248
           S  +RM+++N  NY +WK KMEDLLY KD  L +     KPE   +A+W  L R   GYI
Sbjct: 3   SNTSRMITVNGSNYHVWKGKMEDLLYAKDYYLLVF-ASEKPENKTDAKWDLLHRHVCGYI 61

Query: 249 RQWIDDSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGSSMSEHLN 428
           RQW+D++V +HV++E  A SLW KLE LY RK+G NK+ ++KK    KYQ+ ++M++HLN
Sbjct: 62  RQWVDNNVLNHVSEEKHARSLWNKLEQLYARKTGNNKLFLIKKMISLKYQDETTMTDHLN 121

Query: 429 EVQNIINQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEMATTSLLN 608
             Q IINQ+  M I   +E++ L+LLG+L +SWET   SL  +A DG + M++  + +LN
Sbjct: 122 TFQGIINQLVRMNIKFEEEMQGLWLLGTLSDSWETFRTSLSNSAPDGTMNMDLVKSCVLN 181

Query: 609 EETXXXXXXXXXXXEVLFTE 668
           EE            +VL T+
Sbjct: 182 EEMGRKSQGSSSQLDVLVTK 201


>ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|222852805|gb|EEE90352.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  177 bits (449), Expect = 2e-42
 Identities = 79/177 (44%), Positives = 116/177 (65%)
 Frame = +3

Query: 84  MMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAEWKKLDRKAIGYIRQWID 263
           M+ L   NY +WK  MED LYC DLALPIE +G+KP+  D+A+W  L+RKA   +R+W+ 
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVRKWVS 67

Query: 264 DSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGSSMSEHLNEVQNI 443
               +H++QE   +++WK LE+ + ++S  NKV V+K   + KY++G   S H+N  Q  
Sbjct: 68  SKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIKDLVNLKYRDGEDASVHINVFQGF 127

Query: 444 INQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEMATTSLLNEE 614
           +NQ+ LM + L DE++AL LL SLP SWETL VSL  +  +G +T++     +LNEE
Sbjct: 128 LNQLSLMNLELADEMQALILLSSLPNSWETLVVSLSNSTPNGKLTLKTVKDCILNEE 184


>ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|222845632|gb|EEE83179.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  177 bits (448), Expect = 2e-42
 Identities = 78/177 (44%), Positives = 117/177 (66%)
 Frame = +3

Query: 84  MMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAEWKKLDRKAIGYIRQWID 263
           M+ L   NY +WK  MED LYC DLALPIE +G+KP+  D+A+W  L+RKA   +R+W+ 
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDDMDDAKWNGLNRKATANVRKWVS 67

Query: 264 DSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGSSMSEHLNEVQNI 443
               +H++QE   +++WK LE+ + ++S  NKV V++   + KY++G   S H+N  Q  
Sbjct: 68  SKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIRDLVNLKYRDGEDASVHINVFQGF 127

Query: 444 INQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEMATTSLLNEE 614
           +NQ+ LM + L DE++AL LL SLP+SWETL VSL  +  +G +T++     +LNEE
Sbjct: 128 LNQLSLMNLELADEMQALILLSSLPDSWETLVVSLSNSTPNGKLTLKTVKDCILNEE 184


>ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  176 bits (446), Expect = 4e-42
 Identities = 78/177 (44%), Positives = 116/177 (65%)
 Frame = +3

Query: 84  MMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAEWKKLDRKAIGYIRQWID 263
           M+ L   NY +WK  MED LYC DLALPIE +G+KP   D+A+W  L+RKA   +R+W+ 
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPNDMDDAKWNGLNRKATANVRKWVS 67

Query: 264 DSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGSSMSEHLNEVQNI 443
               +H++QE   +++WK LE+ + ++S  NKV V++   + KY++G   S H+N  Q  
Sbjct: 68  SKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIRDLVNLKYRDGEDASVHINVFQGF 127

Query: 444 INQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEMATTSLLNEE 614
           +NQ+ LM + L DE++AL LL SLP+SWETL VSL  +  +G +T++     +LNEE
Sbjct: 128 LNQLSLMNLELADEMQALILLSSLPDSWETLVVSLSNSTPNGKLTLKTVKDCILNEE 184


>ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  174 bits (441), Expect = 2e-41
 Identities = 77/177 (43%), Positives = 114/177 (64%)
 Frame = +3

Query: 84  MMSLNRKNYTIWKAKMEDLLYCKDLALPIENEGVKPEKTDEAEWKKLDRKAIGYIRQWID 263
           M+ L   NY +WK  MED LYC DL LPIE +G+KP+  D+A+W  L+RKA   +R+W+ 
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLDLPIECKGIKPDDMDDAKWNGLNRKATANVRKWVS 67

Query: 264 DSVFHHVAQETTAFSLWKKLEDLYERKSGGNKVLVVKKFADTKYQEGSSMSEHLNEVQNI 443
               +H++QE   +++WK LE+ + +KS  NKV V++   + KY++G   S H+N  Q  
Sbjct: 68  SKSINHISQEHDCYTIWKMLEETFAKKSAQNKVFVIRDLVNLKYKDGEDASVHINIFQGF 127

Query: 444 INQMHLMKINLGDEVEALFLLGSLPESWETLAVSLHGAAKDGIVTMEMATTSLLNEE 614
            NQ+ LM + L DE++AL LL SLP+SWE L VSL  +  +G +T++     +LNEE
Sbjct: 128 FNQLSLMNLELADEMQALILLSSLPDSWEILVVSLSNSTPNGKITLKTMKNCILNEE 184


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