BLASTX nr result
ID: Coptis25_contig00009977
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009977
(1260 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2... 228 8e-98
ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas... 233 1e-97
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu... 230 2e-96
ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia... 231 4e-92
ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arab... 231 1e-91
>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
predicted protein [Populus trichocarpa]
Length = 932
Score = 228 bits (581), Expect(3) = 8e-98
Identities = 114/127 (89%), Positives = 119/127 (93%)
Frame = +1
Query: 523 DIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRCLKNPELFDKMGIKPPH 702
D+WQGI+F +SK +ARVDGSTGV F DVAGIDEAV+ELQELVR LKNPELFDKMGIKPPH
Sbjct: 394 DLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDEAVEELQELVRYLKNPELFDKMGIKPPH 453
Query: 703 GVHLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIWDLFKRAKVNKPS 882
GV LEG PGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARI DLFKRAKVNKPS
Sbjct: 454 GVLLEGAPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 513
Query: 883 VIFIDEI 903
VIFIDEI
Sbjct: 514 VIFIDEI 520
Score = 122 bits (305), Expect(3) = 8e-98
Identities = 61/111 (54%), Positives = 72/111 (64%)
Frame = +1
Query: 1 KLPQYPHLVASSISSRMKVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGVIYVMWP 180
KLP+YPH VASSISSRM VELGM+T TSF + +YV WP
Sbjct: 253 KLPEYPHPVASSISSRMMVELGMVTAVMAAAAVVVGGFLASAVFAVTSFIFVATVYVAWP 312
Query: 181 LAKPIFKLVLGLCSGILEGISDKIYDVFSDGGISSKLYEFYTFGGVSSSLE 333
+AKP KL LGL ILEG+ D + D+FSDGG+ SK YEFYTFGGVS+S+E
Sbjct: 313 IAKPFVKLFLGLTFSILEGVWDYVVDIFSDGGLFSKFYEFYTFGGVSASIE 363
Score = 56.6 bits (135), Expect(3) = 8e-98
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +3
Query: 333 VLKPIMLVFVTMVLLIQFTLSRRPKNFRKW 422
+LKPIMLV +TMVLL++FTLSRRPKNFRKW
Sbjct: 364 MLKPIMLVLLTMVLLVRFTLSRRPKNFRKW 393
>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
gi|296090151|emb|CBI39970.3| unnamed protein product
[Vitis vinifera]
Length = 907
Score = 233 bits (594), Expect(3) = 1e-97
Identities = 117/127 (92%), Positives = 120/127 (94%)
Frame = +1
Query: 523 DIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRCLKNPELFDKMGIKPPH 702
DIWQGIEF QSK QARVDGSTGV F DVAGI+EAV+ELQELV+ LKNPELFDKMGIKPPH
Sbjct: 370 DIWQGIEFSQSKAQARVDGSTGVKFSDVAGIEEAVEELQELVKYLKNPELFDKMGIKPPH 429
Query: 703 GVHLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIWDLFKRAKVNKPS 882
GV LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARI DLFKRAKVNKPS
Sbjct: 430 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 489
Query: 883 VIFIDEI 903
VIFIDEI
Sbjct: 490 VIFIDEI 496
Score = 115 bits (287), Expect(3) = 1e-97
Identities = 58/111 (52%), Positives = 71/111 (63%)
Frame = +1
Query: 1 KLPQYPHLVASSISSRMKVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGVIYVMWP 180
KLP++PH VASSISSRM VELGM+T TSF + +YV+WP
Sbjct: 229 KLPEFPHPVASSISSRMMVELGMVTAVMAAAAVVVGGFLASAVFAVTSFIFATAVYVVWP 288
Query: 181 LAKPIFKLVLGLCSGILEGISDKIYDVFSDGGISSKLYEFYTFGGVSSSLE 333
L KP +L G+ SGILE + D + DVFSDGG+ SKL E YTFGG+S+SLE
Sbjct: 289 LVKPFLRLFTGIISGILERVWDNVIDVFSDGGVFSKLNEIYTFGGISASLE 339
Score = 57.8 bits (138), Expect(3) = 1e-97
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 333 VLKPIMLVFVTMVLLIQFTLSRRPKNFRKWVI 428
+LKPIMLVF+TM LL++FTLSRRPKNFRKW I
Sbjct: 340 MLKPIMLVFLTMALLVRFTLSRRPKNFRKWDI 371
>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
putative [Ricinus communis]
Length = 925
Score = 230 bits (586), Expect(3) = 2e-96
Identities = 114/127 (89%), Positives = 120/127 (94%)
Frame = +1
Query: 523 DIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRCLKNPELFDKMGIKPPH 702
D+WQGI+F +SK +ARVDGSTGV F DVAGID+AV+ELQELVR LKNPELFDKMGIKPPH
Sbjct: 390 DLWQGIDFSRSKAEARVDGSTGVKFSDVAGIDDAVEELQELVRYLKNPELFDKMGIKPPH 449
Query: 703 GVHLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIWDLFKRAKVNKPS 882
GV LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARI DLFKRAKVNKPS
Sbjct: 450 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 509
Query: 883 VIFIDEI 903
VIFIDEI
Sbjct: 510 VIFIDEI 516
Score = 117 bits (293), Expect(3) = 2e-96
Identities = 62/111 (55%), Positives = 74/111 (66%)
Frame = +1
Query: 1 KLPQYPHLVASSISSRMKVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGVIYVMWP 180
KLP+YPH VASSISSRM VELGM+T TSF + +YV+WP
Sbjct: 253 KLPEYPHPVASSISSRMIVELGMVTAVMATAAVAVGGFLASAVFVVTSFIFVTTVYVIWP 312
Query: 181 LAKPIFKLVLGLCSGILEGISDKIYDVFSDGGISSKLYEFYTFGGVSSSLE 333
+A+P KL LG+ SGILEGI +DVFSDGG+ SKL EFYTFGGVS+S+E
Sbjct: 313 IARPFVKLFLGIISGILEGI----FDVFSDGGVFSKLSEFYTFGGVSASIE 359
Score = 54.3 bits (129), Expect(3) = 2e-96
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3
Query: 333 VLKPIMLVFVTMVLLIQFTLSRRPKNFRKW 422
+LKPI LV +TMVLL++FTLSRRPKNFRKW
Sbjct: 360 MLKPITLVLLTMVLLVRFTLSRRPKNFRKW 389
>ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana]
gi|2262118|gb|AAB63626.1| cell division protein isolog
[Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell
division protein-like [Arabidopsis thaliana]
gi|7269243|emb|CAB81312.1| cell division protein-like
[Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH
extracellular protease [Arabidopsis thaliana]
Length = 946
Score = 231 bits (588), Expect(3) = 4e-92
Identities = 115/127 (90%), Positives = 119/127 (93%)
Frame = +1
Query: 523 DIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRCLKNPELFDKMGIKPPH 702
D+WQGI F QSK +ARVDGSTGV F DVAGIDEAVDELQELV+ LKNP+LFDKMGIKPPH
Sbjct: 405 DLWQGIAFSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPH 464
Query: 703 GVHLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIWDLFKRAKVNKPS 882
GV LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARI DLFKRAKVNKPS
Sbjct: 465 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 524
Query: 883 VIFIDEI 903
VIFIDEI
Sbjct: 525 VIFIDEI 531
Score = 101 bits (252), Expect(3) = 4e-92
Identities = 53/111 (47%), Positives = 70/111 (63%)
Frame = +1
Query: 1 KLPQYPHLVASSISSRMKVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGVIYVMWP 180
K+ +P+ VASSISSR+ VELGM+T TSFA+ +YV+WP
Sbjct: 264 KVADFPNPVASSISSRVMVELGMVTAVIAAAAVVVGGFLASAVFAVTSFAFVTTVYVVWP 323
Query: 181 LAKPIFKLVLGLCSGILEGISDKIYDVFSDGGISSKLYEFYTFGGVSSSLE 333
+AKP KL +G+ G+LE D I DV +DGGI S++ +FYTFGGV+SSLE
Sbjct: 324 IAKPFLKLFVGVFLGVLEKSWDYIVDVLADGGIFSRISDFYTFGGVASSLE 374
Score = 55.1 bits (131), Expect(3) = 4e-92
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +3
Query: 333 VLKPIMLVFVTMVLLIQFTLSRRPKNFRKW 422
+LKPI+LV +TMVLL++FTLSRRPKNFRKW
Sbjct: 375 MLKPILLVVMTMVLLVRFTLSRRPKNFRKW 404
>ref|XP_002869753.1| hypothetical protein ARALYDRAFT_492469 [Arabidopsis lyrata subsp.
lyrata] gi|297315589|gb|EFH46012.1| hypothetical protein
ARALYDRAFT_492469 [Arabidopsis lyrata subsp. lyrata]
Length = 933
Score = 231 bits (588), Expect(3) = 1e-91
Identities = 115/127 (90%), Positives = 119/127 (93%)
Frame = +1
Query: 523 DIWQGIEFGQSKPQARVDGSTGVSFGDVAGIDEAVDELQELVRCLKNPELFDKMGIKPPH 702
D+WQGI F QSK +ARVDGSTGV F DVAGIDEAVDELQELV+ LKNP+LFDKMGIKPPH
Sbjct: 392 DLWQGIAFSQSKAEARVDGSTGVKFADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPH 451
Query: 703 GVHLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIWDLFKRAKVNKPS 882
GV LEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARI DLFKRAKVNKPS
Sbjct: 452 GVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPS 511
Query: 883 VIFIDEI 903
VIFIDEI
Sbjct: 512 VIFIDEI 518
Score = 100 bits (248), Expect(3) = 1e-91
Identities = 52/111 (46%), Positives = 68/111 (61%)
Frame = +1
Query: 1 KLPQYPHLVASSISSRMKVELGMLTXXXXXXXXXXXXXXXXXXXXXTSFAYFGVIYVMWP 180
K+ +P+ VASSISSR+ VELGM+T TSFA+ +YV+WP
Sbjct: 251 KVTDFPNPVASSISSRVMVELGMVTAVIAAAAVVVGGFLASAVFAVTSFAFVTTVYVVWP 310
Query: 181 LAKPIFKLVLGLCSGILEGISDKIYDVFSDGGISSKLYEFYTFGGVSSSLE 333
+AKP KL +G+ G+LE D + D DGGI S++ +FYTFGGVSSSLE
Sbjct: 311 IAKPFLKLFVGIFFGVLEKSWDYLVDFLGDGGIFSRISDFYTFGGVSSSLE 361
Score = 55.1 bits (131), Expect(3) = 1e-91
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +3
Query: 333 VLKPIMLVFVTMVLLIQFTLSRRPKNFRKW 422
+LKPI+LV +TMVLL++FTLSRRPKNFRKW
Sbjct: 362 MLKPILLVVMTMVLLVRFTLSRRPKNFRKW 391