BLASTX nr result

ID: Coptis25_contig00009973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009973
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314280.1| predicted protein [Populus trichocarpa] gi|2...   375   e-156
ref|NP_563805.1| uncharacterized protein [Arabidopsis thaliana] ...   378   e-155
ref|XP_004145746.1| PREDICTED: uncharacterized protein LOC101216...   369   e-152
ref|XP_002880936.1| hypothetical protein ARALYDRAFT_481676 [Arab...   373   e-152
ref|NP_850118.1| uncharacterized protein [Arabidopsis thaliana] ...   373   e-152

>ref|XP_002314280.1| predicted protein [Populus trichocarpa] gi|222850688|gb|EEE88235.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  375 bits (963), Expect(4) = e-156
 Identities = 168/220 (76%), Positives = 195/220 (88%)
 Frame = +2

Query: 395  VSLVDDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDP 574
            +S+V+ N  FR  +    L S  + + +YV TNPRGAE LPPGIVV+++D YLRRLWG+P
Sbjct: 57   ISIVNQNE-FRRSKSLETLGSGSNVTNIYVPTNPRGAELLPPGIVVAESDFYLRRLWGEP 115

Query: 575  NEDLKTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIH 754
            +ED+  +PKYL+TFTVG++Q+NNI+AAVKKFS+DF ILLFHYDGRTSEWDQFEW+K AIH
Sbjct: 116  SEDMLKKPKYLLTFTVGYDQRNNINAAVKKFSDDFQILLFHYDGRTSEWDQFEWSKSAIH 175

Query: 755  VSVKKQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGL 934
            VS+ +QTKWWYAKRFLHPD+V AY+YIFIWDEDLGVEHFN EKYIQL+KKHGLEISQPGL
Sbjct: 176  VSIMRQTKWWYAKRFLHPDIVGAYEYIFIWDEDLGVEHFNGEKYIQLIKKHGLEISQPGL 235

Query: 935  EPNNGLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 1054
            EPNNGLTWQMTKRRGD EVHK+TEEKPGWCSDPHLPPCAA
Sbjct: 236  EPNNGLTWQMTKRRGDREVHKDTEEKPGWCSDPHLPPCAA 275



 Score =  111 bits (277), Expect(4) = e-156
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = +3

Query: 1113 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 1265
            FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS
Sbjct: 276  FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 326



 Score =  103 bits (256), Expect(4) = e-156
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = +1

Query: 1324 KIGVVDSQWIVHQVIPSLGEQGNSENGKAPWEGVRERCQSEWTEFRNRLADAEKKYFAQV 1503
            KIGVVDSQWI+HQVIPSLG QG SE GKAPWEGVR RC++EW+ FR+RLADAE+ Y +Q 
Sbjct: 320  KIGVVDSQWIIHQVIPSLGSQGKSEKGKAPWEGVRARCRNEWSLFRSRLADAEQAYISQT 379

Query: 1504 GK 1509
             K
Sbjct: 380  KK 381



 Score = 33.1 bits (74), Expect(4) = e-156
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 226 MGTPYRSGPHKKSNDSARLVI 288
           MGT +RSG ++K+NDSARL+I
Sbjct: 1   MGTIHRSGVYRKTNDSARLII 21


>ref|NP_563805.1| uncharacterized protein [Arabidopsis thaliana]
            gi|79317279|ref|NP_001030994.1| uncharacterized protein
            [Arabidopsis thaliana] gi|15810567|gb|AAL07171.1|
            putative storage protein [Arabidopsis thaliana]
            gi|20259569|gb|AAM14127.1| putative storage protein
            [Arabidopsis thaliana] gi|332190112|gb|AEE28233.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|332190113|gb|AEE28234.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 382

 Score =  378 bits (970), Expect(4) = e-155
 Identities = 169/217 (77%), Positives = 194/217 (89%)
 Frame = +2

Query: 404  VDDNRSFRDIQLKHDLNSSRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNED 583
            + D + F   +   D+ S R S K+YV TNP GAE LPPGI+V++TD YLRRLWG+P+ED
Sbjct: 59   MSDGKLFSGGRSPEDIGS-RKSPKIYVPTNPHGAELLPPGIIVAETDFYLRRLWGEPSED 117

Query: 584  LKTRPKYLVTFTVGFNQKNNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSV 763
            LK +PKYLVTFTVGF Q+NNI+AAVKKFSEDF ILLFHYDGRT+EWDQFEW+K AIH+S 
Sbjct: 118  LKKKPKYLVTFTVGFEQRNNINAAVKKFSEDFQILLFHYDGRTTEWDQFEWSKNAIHISA 177

Query: 764  KKQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPN 943
            KKQTKWWYAKRFLHPDVV+AY+YIFIWDEDLGVEHFNA++Y++LVKKHGLEISQPGLEPN
Sbjct: 178  KKQTKWWYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKHGLEISQPGLEPN 237

Query: 944  NGLTWQMTKRRGDSEVHKETEEKPGWCSDPHLPPCAA 1054
            NGLTW+MTKRRGD +VHKET+EKPGWCSDPHLPPCAA
Sbjct: 238  NGLTWEMTKRRGDRDVHKETKEKPGWCSDPHLPPCAA 274



 Score =  111 bits (277), Expect(4) = e-155
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = +3

Query: 1113 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 1265
            FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS
Sbjct: 275  FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 325



 Score =  101 bits (251), Expect(4) = e-155
 Identities = 43/59 (72%), Positives = 52/59 (88%)
 Frame = +1

Query: 1324 KIGVVDSQWIVHQVIPSLGEQGNSENGKAPWEGVRERCQSEWTEFRNRLADAEKKYFAQ 1500
            KIGVVDSQWI+HQVIPSLG QG SE GK+PW+GVRERC++EWT F+NR+A+A+K Y  Q
Sbjct: 319  KIGVVDSQWIIHQVIPSLGSQGESEEGKSPWQGVRERCRNEWTMFQNRVAEADKAYMEQ 377



 Score = 29.3 bits (64), Expect(4) = e-155
 Identities = 11/22 (50%), Positives = 19/22 (86%)
 Frame = +1

Query: 226 MGTPYRSGPHKKSNDSARLVIT 291
           MGT +RSG  +++N++A+L+IT
Sbjct: 1   MGTMHRSGAPRRTNENAKLIIT 22


>ref|XP_004145746.1| PREDICTED: uncharacterized protein LOC101216740 [Cucumis sativus]
            gi|449524368|ref|XP_004169195.1| PREDICTED:
            uncharacterized LOC101216740 [Cucumis sativus]
          Length = 393

 Score =  369 bits (948), Expect(3) = e-152
 Identities = 166/194 (85%), Positives = 181/194 (93%)
 Frame = +2

Query: 473  KVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDLKTRPKYLVTFTVGFNQKNNIDA 652
            K+YV TNPRGAE LPPGIV S +D YLRRLWG+P+EDL  +PKYLVTFTVGF+Q+ NIDA
Sbjct: 81   KIYVPTNPRGAESLPPGIVASGSDFYLRRLWGEPSEDLNKKPKYLVTFTVGFDQRKNIDA 140

Query: 653  AVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVKKQTKWWYAKRFLHPDVVAAYDY 832
            AVKKFS+DFTILLFHYDGR +EWDQ+EW+K AIH+SVKKQTKWWYAKRFLHPDVVAAY+Y
Sbjct: 141  AVKKFSDDFTILLFHYDGRITEWDQYEWSKNAIHISVKKQTKWWYAKRFLHPDVVAAYEY 200

Query: 833  IFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNNGLTWQMTKRRGDSEVHKETEEK 1012
            IFIWDEDLGVEHFNAEKYI+LVKKHGLEISQPGLEPNNGLTWQMTKRRGD EVHK+TEEK
Sbjct: 201  IFIWDEDLGVEHFNAEKYIELVKKHGLEISQPGLEPNNGLTWQMTKRRGDREVHKDTEEK 260

Query: 1013 PGWCSDPHLPPCAA 1054
             GWCSDP LPPCAA
Sbjct: 261  AGWCSDPRLPPCAA 274



 Score =  110 bits (276), Expect(3) = e-152
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = +1

Query: 1324 KIGVVDSQWIVHQVIPSLGEQGNSENGKAPWEGVRERCQSEWTEFRNRLADAEKKYFAQV 1503
            KIGVVDSQWIVHQVIPSLG QG SENGKAPWEGVRERC++EW EF++RLA+A+K Y AQ+
Sbjct: 319  KIGVVDSQWIVHQVIPSLGSQGKSENGKAPWEGVRERCRTEWAEFQSRLANADKAYLAQI 378

Query: 1504 GK 1509
             K
Sbjct: 379  SK 380



 Score =  110 bits (274), Expect(3) = e-152
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = +3

Query: 1113 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 1265
            FVEIMAPVFS++AWRCVWH+IQNDLVHGWGLDFALRRCVEPAHEKIGVVDS
Sbjct: 275  FVEIMAPVFSREAWRCVWHLIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 325


>ref|XP_002880936.1| hypothetical protein ARALYDRAFT_481676 [Arabidopsis lyrata subsp.
            lyrata] gi|297326775|gb|EFH57195.1| hypothetical protein
            ARALYDRAFT_481676 [Arabidopsis lyrata subsp. lyrata]
          Length = 381

 Score =  373 bits (957), Expect(3) = e-152
 Identities = 165/199 (82%), Positives = 184/199 (92%)
 Frame = +2

Query: 458  SRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDLKTRPKYLVTFTVGFNQK 637
            SR   ++YV TNPRGAE LPPGIVV+KTD YLRRLWG+PNEDLK +PKYLVTFTVGF Q+
Sbjct: 76   SRKFPEIYVPTNPRGAELLPPGIVVAKTDFYLRRLWGEPNEDLKKKPKYLVTFTVGFEQR 135

Query: 638  NNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVKKQTKWWYAKRFLHPDVV 817
            N+I+  VKKFSEDF ILLFHYDGRT+EWDQFEW+K AIH+S +KQTKWWYAKRFLHPDVV
Sbjct: 136  NHINGVVKKFSEDFQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPDVV 195

Query: 818  AAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNNGLTWQMTKRRGDSEVHK 997
            +AY+YIFIWDEDLGVEHFNA+KYI+LVKKHGLEISQPGLEPNNGLTW+MTKRRGD EVHK
Sbjct: 196  SAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNNGLTWEMTKRRGDREVHK 255

Query: 998  ETEEKPGWCSDPHLPPCAA 1054
            +T+EKPGWC DPHLPPCAA
Sbjct: 256  DTKEKPGWCKDPHLPPCAA 274



 Score =  111 bits (277), Expect(3) = e-152
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = +3

Query: 1113 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 1265
            FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS
Sbjct: 275  FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 325



 Score =  105 bits (263), Expect(3) = e-152
 Identities = 46/62 (74%), Positives = 55/62 (88%)
 Frame = +1

Query: 1324 KIGVVDSQWIVHQVIPSLGEQGNSENGKAPWEGVRERCQSEWTEFRNRLADAEKKYFAQV 1503
            KIGVVDSQWI+H+VIPSLG QG SENGKAPW+GVRERC+ EWT F+NRLADA+K+Y  ++
Sbjct: 319  KIGVVDSQWIIHKVIPSLGSQGKSENGKAPWQGVRERCKMEWTMFQNRLADADKEYLGRM 378

Query: 1504 GK 1509
             K
Sbjct: 379  VK 380


>ref|NP_850118.1| uncharacterized protein [Arabidopsis thaliana]
            gi|30683846|ref|NP_850119.1| uncharacterized protein
            [Arabidopsis thaliana] gi|238479383|ref|NP_001154537.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|62320360|dbj|BAD94744.1| hypothetical protein
            [Arabidopsis thaliana] gi|330253009|gb|AEC08103.1|
            uncharacterized protein [Arabidopsis thaliana]
            gi|330253010|gb|AEC08104.1| uncharacterized protein
            [Arabidopsis thaliana] gi|330253011|gb|AEC08105.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 374

 Score =  373 bits (957), Expect(3) = e-152
 Identities = 165/199 (82%), Positives = 184/199 (92%)
 Frame = +2

Query: 458  SRDSSKVYVATNPRGAEFLPPGIVVSKTDLYLRRLWGDPNEDLKTRPKYLVTFTVGFNQK 637
            SR   ++YV TNPRGAE LPPGIVV+KTD YLRRLWG+PNEDLK +PKYLVTFTVGF Q+
Sbjct: 69   SRKFPEIYVPTNPRGAELLPPGIVVAKTDFYLRRLWGEPNEDLKKKPKYLVTFTVGFEQR 128

Query: 638  NNIDAAVKKFSEDFTILLFHYDGRTSEWDQFEWAKRAIHVSVKKQTKWWYAKRFLHPDVV 817
            N+I+  VKKFSEDF ILLFHYDGRT+EWDQFEW+K AIH+S +KQTKWWYAKRFLHPDVV
Sbjct: 129  NHINGVVKKFSEDFQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPDVV 188

Query: 818  AAYDYIFIWDEDLGVEHFNAEKYIQLVKKHGLEISQPGLEPNNGLTWQMTKRRGDSEVHK 997
            +AY+YIFIWDEDLGVEHFNA+KYI+LVKKHGLEISQPGLEPNNGLTW+MTKRRGD EVHK
Sbjct: 189  SAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNNGLTWEMTKRRGDREVHK 248

Query: 998  ETEEKPGWCSDPHLPPCAA 1054
            +T+EKPGWC DPHLPPCAA
Sbjct: 249  DTKEKPGWCKDPHLPPCAA 267



 Score =  111 bits (277), Expect(3) = e-152
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = +3

Query: 1113 FVEIMAPVFSQKAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 1265
            FVEIMAPVFS++AWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS
Sbjct: 268  FVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDS 318



 Score =  104 bits (260), Expect(3) = e-152
 Identities = 45/62 (72%), Positives = 55/62 (88%)
 Frame = +1

Query: 1324 KIGVVDSQWIVHQVIPSLGEQGNSENGKAPWEGVRERCQSEWTEFRNRLADAEKKYFAQV 1503
            KIGVVDSQWI+H+VIPSLG QG SENGKAPW+GVR+RC+ EWT F+NRLADA+K+Y  ++
Sbjct: 312  KIGVVDSQWIIHKVIPSLGSQGKSENGKAPWQGVRDRCKMEWTMFQNRLADADKEYLGKM 371

Query: 1504 GK 1509
             K
Sbjct: 372  VK 373


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