BLASTX nr result

ID: Coptis25_contig00009963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009963
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndr...    69   5e-11
ref|NP_564447.1| uncharacterized protein [Arabidopsis thaliana] ...    67   7e-11
ref|XP_002891103.1| hypothetical protein ARALYDRAFT_473598 [Arab...    67   7e-11
dbj|BAE99576.1| hypothetical protein [Arabidopsis thaliana]            67   7e-11
emb|CBI18181.3| unnamed protein product [Vitis vinifera]               71   1e-10

>ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein,
           putative [Ricinus communis] gi|223531545|gb|EEF33375.1|
           Non-imprinted in Prader-Willi/Angelman syndrome region
           protein, putative [Ricinus communis]
          Length = 345

 Score = 69.3 bits (168), Expect(2) = 5e-11
 Identities = 38/63 (60%), Positives = 39/63 (61%)
 Frame = -1

Query: 191 DNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXXYEPLWWAGMITMVVG 12
           DNIKGLVLALSSSFFIGASFIV                       YEPLWW GMITM+VG
Sbjct: 16  DNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGLRAGSGGYSYLYEPLWWVGMITMIVG 75

Query: 11  EIA 3
           EIA
Sbjct: 76  EIA 78



 Score = 22.7 bits (47), Expect(2) = 5e-11
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 300 QSWTLAYKGMSS 265
           QSW  +YKGMSS
Sbjct: 4   QSWRDSYKGMSS 15


>ref|NP_564447.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8778257|gb|AAF79266.1|AC023279_15 F12K21.21
           [Arabidopsis thaliana]
           gi|12323864|gb|AAG51905.1|AC023913_13 hypothetical
           protein; 4619-2435 [Arabidopsis thaliana]
           gi|89000981|gb|ABD59080.1| At1g34470 [Arabidopsis
           thaliana] gi|332193596|gb|AEE31717.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 368

 Score = 67.0 bits (162), Expect(2) = 7e-11
 Identities = 36/63 (57%), Positives = 37/63 (58%)
 Frame = -1

Query: 191 DNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXXYEPLWWAGMITMVVG 12
           DNIKGLVLALSSS FIGASFIV                        EPLWW GMITM+VG
Sbjct: 18  DNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIVG 77

Query: 11  EIA 3
           EIA
Sbjct: 78  EIA 80



 Score = 24.6 bits (52), Expect(2) = 7e-11
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 315 MAETAQSWTLAYKGMSS 265
           MA  + SW  AYKGMSS
Sbjct: 1   MASLSGSWRDAYKGMSS 17


>ref|XP_002891103.1| hypothetical protein ARALYDRAFT_473598 [Arabidopsis lyrata subsp.
           lyrata] gi|297336945|gb|EFH67362.1| hypothetical protein
           ARALYDRAFT_473598 [Arabidopsis lyrata subsp. lyrata]
          Length = 368

 Score = 67.0 bits (162), Expect(2) = 7e-11
 Identities = 36/63 (57%), Positives = 37/63 (58%)
 Frame = -1

Query: 191 DNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXXYEPLWWAGMITMVVG 12
           DNIKGLVLALSSS FIGASFIV                        EPLWW GMITM+VG
Sbjct: 18  DNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIVG 77

Query: 11  EIA 3
           EIA
Sbjct: 78  EIA 80



 Score = 24.6 bits (52), Expect(2) = 7e-11
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 315 MAETAQSWTLAYKGMSS 265
           MA  + SW  AYKGMSS
Sbjct: 1   MASLSGSWRDAYKGMSS 17


>dbj|BAE99576.1| hypothetical protein [Arabidopsis thaliana]
          Length = 106

 Score = 67.0 bits (162), Expect(2) = 7e-11
 Identities = 36/63 (57%), Positives = 37/63 (58%)
 Frame = -1

Query: 191 DNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXXYEPLWWAGMITMVVG 12
           DNIKGLVLALSSS FIGASFIV                        EPLWW GMITM+VG
Sbjct: 18  DNIKGLVLALSSSLFIGASFIVKKKGLKRAGASGLRAGSGGYSYLLEPLWWVGMITMIVG 77

Query: 11  EIA 3
           EIA
Sbjct: 78  EIA 80



 Score = 24.6 bits (52), Expect(2) = 7e-11
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 315 MAETAQSWTLAYKGMSS 265
           MA  + SW  AYKGMSS
Sbjct: 1   MASLSGSWRDAYKGMSS 17


>emb|CBI18181.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/63 (61%), Positives = 40/63 (63%)
 Frame = -1

Query: 191 DNIKGLVLALSSSFFIGASFIVXXXXXXXXXXXXXXXXXXXXXXXYEPLWWAGMITMVVG 12
           DNIKGLVLALSSSFFIGASFIV                       YEPLWWAGMITM+VG
Sbjct: 4   DNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWAGMITMIVG 63

Query: 11  EIA 3
           EIA
Sbjct: 64  EIA 66


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